Guide to the Human Genome
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Search of human proteins with 169162723

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162723 PREDICTED: hypothetical protein [Homo sapiens]
         (258 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169161962 PREDICTED: hypothetical protein [Homo sapiens]           513   e-146
gi|169162723 PREDICTED: hypothetical protein [Homo sapiens]           513   e-146
gi|169162422 PREDICTED: hypothetical protein [Homo sapiens]           406   e-113
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa...    39   0.003
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s...    39   0.003
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s...    39   0.003
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s...    39   0.003
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             37   0.017
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]    36   0.029
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]    36   0.029
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             34   0.14 
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]         33   0.19 
gi|153792074 proline rich 12 [Homo sapiens]                            33   0.25 
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]        33   0.32 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            33   0.32 
gi|7019535 B-cell linker isoform 1 [Homo sapiens]                      33   0.32 
gi|4505835 polycystin 2 [Homo sapiens]                                 32   0.42 
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    32   0.42 
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    32   0.42 
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    32   0.42 
gi|54873613 agrin [Homo sapiens]                                       32   0.55 
gi|210032580 SET domain containing 1B [Homo sapiens]                   32   0.55 
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    32   0.72 
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]             31   0.93 
gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens]     31   0.93 
gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens]     31   0.93 
gi|38198663 potassium channel tetramerisation domain containing ...    31   0.93 

>gi|169161962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 258

 Score =  513 bits (1322), Expect = e-146
 Identities = 258/258 (100%), Positives = 258/258 (100%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF
Sbjct: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60

Query: 61  PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
           PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA
Sbjct: 61  PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120

Query: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
           GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR
Sbjct: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180

Query: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
           GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG
Sbjct: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240

Query: 241 GIKCSEVEITLKTGPLAL 258
           GIKCSEVEITLKTGPLAL
Sbjct: 241 GIKCSEVEITLKTGPLAL 258


>gi|169162723 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 258

 Score =  513 bits (1322), Expect = e-146
 Identities = 258/258 (100%), Positives = 258/258 (100%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF
Sbjct: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60

Query: 61  PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
           PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA
Sbjct: 61  PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120

Query: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
           GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR
Sbjct: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180

Query: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
           GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG
Sbjct: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240

Query: 241 GIKCSEVEITLKTGPLAL 258
           GIKCSEVEITLKTGPLAL
Sbjct: 241 GIKCSEVEITLKTGPLAL 258


>gi|169162422 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score =  406 bits (1043), Expect = e-113
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 57  SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 116
           SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS
Sbjct: 48  SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 107

Query: 117 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
           AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS
Sbjct: 108 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167

Query: 177 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 236
           CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE
Sbjct: 168 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 227

Query: 237 QNVGGIKCSEVEITLKTGPLAL 258
           QNVGGIKCSEVEITLKTGPLAL
Sbjct: 228 QNVGGIKCSEVEITLKTGPLAL 249


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 12/161 (7%)

Query: 56  GSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQ------SSKYPRLAA 109
           G++  P  Q  +    P +  P+      P P P  T   +   +      +S+ PRL +
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRS 237

Query: 110 PGSVAPSAACAGHRRRLTRRS----PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPA 165
             +  P A   G   R +R      P P    G  AA    PG    +  G L     P+
Sbjct: 238 RAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPS 297

Query: 166 LSARDALLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGER 206
            + +DA   S C   G  LR+    +  ++ P A SG GER
Sbjct: 298 RARQDAWGLSGCATVG--LRRGDCDRAGSSQPPATSGNGER 336


>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
           sapiens]
          Length = 630

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           +HS Q S S+ +++      P+     LFVA    S S + L     L       G+ + 
Sbjct: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 377

Query: 61  PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
           PA   P++S  P C    +L    +P PTPA +   S        PR A P S AP++  
Sbjct: 378 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 432

Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
                  C       +     PR   G G       A +PG  S ++ G+L   P P   
Sbjct: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 491

Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
            A  +   LLR+     R  R +   L  EAA  P
Sbjct: 492 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 526


>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
           sapiens]
          Length = 618

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           +HS Q S S+ +++      P+     LFVA    S S + L     L       G+ + 
Sbjct: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 365

Query: 61  PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
           PA   P++S  P C    +L    +P PTPA +   S        PR A P S AP++  
Sbjct: 366 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 420

Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
                  C       +     PR   G G       A +PG  S ++ G+L   P P   
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 479

Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
            A  +   LLR+     R  R +   L  EAA  P
Sbjct: 480 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 514


>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
           sapiens]
          Length = 649

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           +HS Q S S+ +++      P+     LFVA    S S + L     L       G+ + 
Sbjct: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 365

Query: 61  PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
           PA   P++S  P C    +L    +P PTPA +   S        PR A P S AP++  
Sbjct: 366 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 420

Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
                  C       +     PR   G G       A +PG  S ++ G+L   P P   
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 479

Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
            A  +   LLR+     R  R +   L  EAA  P
Sbjct: 480 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 514


>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
           sapiens]
          Length = 661

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           +HS Q S S+ +++      P+     LFVA    S S + L     L       G+ + 
Sbjct: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 377

Query: 61  PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
           PA   P++S  P C    +L    +P PTPA +   S        PR A P S AP++  
Sbjct: 378 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 432

Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
                  C       +     PR   G G       A +PG  S ++ G+L   P P   
Sbjct: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 491

Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
            A  +   LLR+     R  R +   L  EAA  P
Sbjct: 492 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 526


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 54/151 (35%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 55  AGSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYP 105
           AGSR     +RPA+  S  A QP   PL + L   A++L  SL         +  S+  P
Sbjct: 237 AGSRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPP 291

Query: 106 RLAAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQE 154
           RLAAP  GS APS +    R RR   RSP       PR  SRG     A    G    + 
Sbjct: 292 RLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV 351

Query: 155 RGVLVGCP--SPALSARDALLRSSCELRGLR 183
           RG   GC   SP + A  A    + E R  R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 54/151 (35%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 55  AGSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYP 105
           AGSR     +RPA+  S  A QP   PL + L   A++L  SL         +  S+  P
Sbjct: 237 AGSRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPP 291

Query: 106 RLAAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQE 154
           RLAAP  GS APS +    R RR   RSP       PR  SRG     A    G    + 
Sbjct: 292 RLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV 351

Query: 155 RGVLVGCP--SPALSARDALLRSSCELRGLR 183
           RG   GC   SP + A  A    + E R  R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 22/163 (13%)

Query: 60  FPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKY----QSSKYPRLAAPGSVAP 115
           +P    P    SPC  +P L+    PL    +       Y      SK+P  AA  + A 
Sbjct: 176 YPGSHYPEIVRSPC--KPPLNYETAPLQGNYVAFPSDPAYFRSLLCSKHPAAAAAAAAAA 233

Query: 116 SAACAGHRR----RLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDA 171
           +AA A        +++   P+P+ + G G      PG  S++       C      A+D 
Sbjct: 234 AAAAAAAAAAAYYQVSAAGPQPKAAAGAGG-----PGSLSYR-------CKRKRGGAKDC 281

Query: 172 LLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQ 214
           LL      R L L       +AAAA  A +     A G   L+
Sbjct: 282 LLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGATCLE 324


>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
          Length = 922

 Score = 36.2 bits (82), Expect = 0.029
 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 66  PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 125
           P  S +P A  P       P PTP  TL  S  + S+  P  + P S + SAA   +   
Sbjct: 347 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 400

Query: 126 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
            +  S       P P  S+G       + G S+    G L G  SP LSA    L S+
Sbjct: 401 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 457


>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
          Length = 944

 Score = 36.2 bits (82), Expect = 0.029
 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 66  PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 125
           P  S +P A  P       P PTP  TL  S  + S+  P  + P S + SAA   +   
Sbjct: 369 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 422

Query: 126 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
            +  S       P P  S+G       + G S+    G L G  SP LSA    L S+
Sbjct: 423 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 479


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 10/131 (7%)

Query: 61  PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
           P    P   +S  A +P    L  P    A  L ++L   +   P +  PG V     CA
Sbjct: 37  PGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVN----CA 92

Query: 121 GHRRRLTRRSPRPRKSRGR---GAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSC 177
                LTR +P PR+S       +A+A  P +   +E     G P    S+  +  +   
Sbjct: 93  VGSAMLTRAAPGPRRSEDEPPAASASAAPPPQRDEEEPD---GVPEKGKSSGPSARKGKG 149

Query: 178 ELRGLRLRKAK 188
           ++   +LR+ +
Sbjct: 150 QIEKRKLREKR 160


>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
          Length = 2481

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 46/155 (29%), Positives = 57/155 (36%), Gaps = 32/155 (20%)

Query: 5    QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIF-----PAGSRT 59
            Q SKS + +    D   +PSST +F A  TS+ SR  L    +    +      PA S +
Sbjct: 2186 QVSKSNNPE----DGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSS 2241

Query: 60   FPACQRPASST---------SPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKY------ 104
             P      SS          SP  H    SP C    +     L  LKY SS Y      
Sbjct: 2242 LPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLFKLKYPSSPYSAHISK 2301

Query: 105  -PRLAAPGS-------VAPSAACAGHRRRLTRRSP 131
             PR  +P S        APS A +       R SP
Sbjct: 2302 SPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSP 2336


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 33.1 bits (74), Expect = 0.25
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 95   HSLKYQSSKYPRLAAPGSVAPSAACAGHRRR--LTRRSPRPRKSRGRGAANACLPGKSSH 152
            H   YQ+   P L+ P SV PS    G + +   T   P P  S   G   A      + 
Sbjct: 1295 HPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGAL----EAA 1350

Query: 153  QERGVLVGCPSPALSARDALLRS 175
            +  G+ +GCPSP     + L R+
Sbjct: 1351 ESEGLGLGCPSPCKRLDEELKRN 1373


>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
          Length = 2089

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 55/249 (22%), Positives = 86/249 (34%), Gaps = 53/249 (21%)

Query: 4    AQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPAC 63
            AQ  +S++ +  T+   P P+ T  F + VT+        +  +   I  P+  +   A 
Sbjct: 1676 AQGGQSKTLRSSTVRAMPVPT-TPEFQSPVTTD-------QPISPEPITQPSCIKRQRAA 1727

Query: 64   QRPASSTSPCAHQPMLSPL--------------------CKPLPTPAITLLHSLKYQSSK 103
              P S  +P  H+P  +PL                       +P PA   L      +S+
Sbjct: 1728 GNPGSLAAPIDHKPCSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHASQ 1787

Query: 104  YPRLAAPG------SVAPSAACAGHRRRLTRRSPRPRKSRGRGAAN-------------A 144
              ++   G       + P A+ +  R   T  SP  +K   RG  +             A
Sbjct: 1788 IQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIKEEEEDTA 1847

Query: 145  CLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLALSGCG 204
              PGK         V  P P    RD        +    LR+ KL QE+ A  +  +G  
Sbjct: 1848 EKPGKEED------VVTPKPGKRKRDQAEEEPNRIPSRSLRRTKLNQESTAPKVLFTGVV 1901

Query: 205  ERAGGRGAL 213
            +  G R  L
Sbjct: 1902 DARGERAVL 1910


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 38/131 (29%), Positives = 46/131 (35%), Gaps = 14/131 (10%)

Query: 54  PAGSRT--FPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPG 111
           PAG+R    P    PA+S     H     PLC P  + A          + +    A P 
Sbjct: 45  PAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPP 104

Query: 112 SVAPSAACAGHRRRLTRRSPRPRKSRGR--------GAANACLPGKSSHQERGVLVGCPS 163
             AP       R   TRRSP P  +RG         GA  A   G  S   R +   C  
Sbjct: 105 CRAPGRG----RAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGG 160

Query: 164 PALSARDALLR 174
            +L A    LR
Sbjct: 161 TSLGAGSRALR 171


>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
          Length = 456

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 23/167 (13%)

Query: 1   MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
           +H  ++S     K P ++    P+S+       T+S      +E  +      PA     
Sbjct: 190 IHPTESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPP----PAAPSPL 245

Query: 61  P-ACQRPAS--STSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
           P A ++P +   T+P A Q   S +C+  P PA       +++ S + + A    V P A
Sbjct: 246 PRAGKKPTTPLKTTPVASQQNASSVCEEKPIPA------ERHRGSSHRQEAVQSPVFPPA 299

Query: 118 ACAGHRRRLTRRSPRPRKSR-GRGAANACLPGKSSH-----QERGVL 158
               H++ +    P PR +  G    +  LP  SS+     QE GVL
Sbjct: 300 QKQIHQKPI----PLPRFTEGGNPTVDGPLPSFSSNSTISEQEAGVL 342


>gi|4505835 polycystin 2 [Homo sapiens]
          Length = 968

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 13/92 (14%)

Query: 157 VLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLA---------LSGCGERA 207
           ++ GC   A+ A  A     CE RGL +   ++ Q AA  P A         LS C  +A
Sbjct: 29  LMAGCA--AVGASLAAPGGLCEQRGLEIEMQRIRQAAARDPPAGAAASPSPPLSSCSRQA 86

Query: 208 GGRGALQDSVVSEKLDFPGSEGQFGIVIEQNV 239
             R         E+ +  G EG  G+V+E +V
Sbjct: 87  WSRDNPGFEAEEEEEEVEGEEG--GMVVEMDV 116


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)

Query: 5   QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
           QT    S +LP L     PSS      ++T +     L     L     P+ S +   C 
Sbjct: 751 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 807

Query: 65  RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
            P S+ +  +  P+LSP   P P+P   +   +   S   P L++  S + S++      
Sbjct: 808 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 867

Query: 125 RLTRRSPRP 133
             +  SP P
Sbjct: 868 SSSSPSPPP 876


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)

Query: 5    QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
            QT    S +LP L     PSS      ++T +     L     L     P+ S +   C 
Sbjct: 952  QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 1008

Query: 65   RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
             P S+ +  +  P+LSP   P P+P   +   +   S   P L++  S + S++      
Sbjct: 1009 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 1068

Query: 125  RLTRRSPRP 133
              +  SP P
Sbjct: 1069 SSSSPSPPP 1077


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)

Query: 5    QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
            QT    S +LP L     PSS      ++T +     L     L     P+ S +   C 
Sbjct: 952  QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 1008

Query: 65   RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
             P S+ +  +  P+LSP   P P+P   +   +   S   P L++  S + S++      
Sbjct: 1009 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 1068

Query: 125  RLTRRSPRP 133
              +  SP P
Sbjct: 1069 SSSSPSPPP 1077


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 32.0 bits (71), Expect = 0.55
 Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 76  QPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRK 135
           QP+        P+  +  +H+  +Q S +   A P      A CA               
Sbjct: 564 QPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCETCGDAVCA--------------- 608

Query: 136 SRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAA 195
                +A  C+  +  H         P P   +      S+CELR     +    +EA A
Sbjct: 609 FGAVCSAGQCVCPRCEHPP-------PGPVCGSDGVTYGSACELREAACLQQTQIEEARA 661

Query: 196 APLALSGCGERAGGRGALQDSVVSEKL 222
            P   + CG  +GG G+ +D    ++L
Sbjct: 662 GPCEQAECG--SGGSGSGEDGDCEQEL 686


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 32.0 bits (71), Expect = 0.55
 Identities = 39/144 (27%), Positives = 52/144 (36%), Gaps = 33/144 (22%)

Query: 54   PAGSRTFPACQRPASS----TSPCAHQPMLS---PLCKPLPTPAITLLHSLKYQSSKYPR 106
            P+G    P C  P       + P A   +L    PL  PLP P    L ++    ++ P 
Sbjct: 1396 PSGPLLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLPLPLALPAVLRAQARAPT 1455

Query: 107  LAAPGSVAPSAACAGHRRR---LTRRSP-----------RPRKSRGRGAANACLPGK--- 149
               P   AP A+C    +R     RRSP           RP      G     LPG+   
Sbjct: 1456 PLPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQT 1515

Query: 150  ----SSHQERGVLV-----GCPSP 164
                S+H  R V +     G P+P
Sbjct: 1516 PVFPSTHDPRTVTLDFRNAGIPAP 1539


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 17/71 (23%)

Query: 54  PAGSRTFPACQRPASSTS---PCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAP 110
           PA  R  PA   PA++ +   P A  P  + LC   P  A+             P  A+P
Sbjct: 146 PAAVRP-PAAGPPAAALAAVYPAAADPSAASLCAASPLAAV-------------PAAASP 191

Query: 111 GSVAPSAACAG 121
            +VAP+A C G
Sbjct: 192 AAVAPAAVCPG 202


>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
          Length = 2240

 Score = 31.2 bits (69), Expect = 0.93
 Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 22/173 (12%)

Query: 12  TKLPTLDERPSPSS--TCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQRPASS 69
           T+ PT   RP P+S      +A+  S   R+ L +            +R   + ++P   
Sbjct: 145 TRGPT-GPRPGPASPGALALIALRVSDPLRKALRQ------------TRVLKSRRKPRRL 191

Query: 70  TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRR 129
              C    ++  L    P P      S     S++  + APGS+ P+A  A   RR  +R
Sbjct: 192 RLQCMLVRVVLSLTPSFPEP------SALSDPSRWSPVLAPGSLCPAAPGAQDPRR-GKR 244

Query: 130 SPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGL 182
           +PRP   R R  A A  P       +    G P    S   A L  +    GL
Sbjct: 245 APRPPLRRRRLPAAASAPAPVPRPSQPRRPGTPEAVASRAVAGLSPALPPGGL 297


>gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
          Length = 166

 Score = 31.2 bits (69), Expect = 0.93
 Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 58  RTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
           RT P+     S   P  + P L P    L  P   L     +  S+ P        AP  
Sbjct: 35  RTMPSRCHCHSPILP--NPPSLPPSLPTLIPPPFLLWGRFSHSHSQTP--------APRI 84

Query: 118 ACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGVLVGCPSPALSARD 170
              G R R   R P P+   GRG+A  CLP G+S      V V    PA +AR+
Sbjct: 85  WAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPVRV----PAAAARE 133


>gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
          Length = 166

 Score = 31.2 bits (69), Expect = 0.93
 Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 58  RTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
           RT P+     S   P  + P L P    L  P   L     +  S+ P        AP  
Sbjct: 35  RTMPSRCHCHSPILP--NPPSLPPSLPTLIPPPFLLWGRFSHSHSQTP--------APRI 84

Query: 118 ACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGVLVGCPSPALSARD 170
              G R R   R P P+   GRG+A  CLP G+S      V V    PA +AR+
Sbjct: 85  WAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPVRV----PAAAARE 133


>gi|38198663 potassium channel tetramerisation domain containing 8
           [Homo sapiens]
          Length = 473

 Score = 31.2 bits (69), Expect = 0.93
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 56  GSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLH--SLKYQSSKYPRLAAPGSV 113
           GS   P  +  +SS+SP A        C P P P +  L+     Y +     L+ P S 
Sbjct: 10  GSTILPISEMVSSSSSPGASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDST 69

Query: 114 -----APSAACAGHRRRLTRRSPRPRKSRGR 139
                +PS+   G R    RR   PR SR R
Sbjct: 70  LASMFSPSSPRGGAR----RRGELPRDSRAR 96


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,002,861
Number of Sequences: 37866
Number of extensions: 564621
Number of successful extensions: 2575
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 2499
Number of HSP's gapped (non-prelim): 186
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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