Search of human proteins with 169162689

Search of human proteins with 169162689

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162689 PREDICTED: hypothetical protein [Homo sapiens]
         (163 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169162689 PREDICTED: hypothetical protein [Homo sapiens]           343   5e-95
gi|169162691 PREDICTED: hypothetical protein [Homo sapiens]           342   1e-94
gi|113411491 PREDICTED: hypothetical protein [Homo sapiens]           340   3e-94
gi|169162687 PREDICTED: hypothetical protein [Homo sapiens]           340   3e-94
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            35   0.029
gi|12751477 forkhead box L2 [Homo sapiens]                             35   0.037
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom...    34   0.049
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    34   0.064
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            33   0.084
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]            33   0.11 
gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]                33   0.11 
gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens]                 33   0.14 
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     33   0.14 
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]           32   0.19 
gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo ...    32   0.19 
gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo ...    32   0.19 
gi|153792074 proline rich 12 [Homo sapiens]                            32   0.19 
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|42544243 dynamin 3 isoform a [Homo sapiens]                         32   0.24 
gi|209915561 dynamin 3 isoform b [Homo sapiens]                        32   0.24 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            32   0.32 
gi|171543895 ataxin 2 [Homo sapiens]                                   32   0.32 
gi|4506943 short stature homeobox isoform SHOXa [Homo sapiens]         31   0.41 
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]            31   0.41 
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ...    31   0.41 
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ...    31   0.41 
gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]            31   0.41 
gi|119943102 CREB binding protein isoform b [Homo sapiens]             31   0.41 
gi|119943104 CREB binding protein isoform a [Homo sapiens]             31   0.41 

>gi|169162689 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  343 bits (879), Expect = 5e-95
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60
           MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA
Sbjct: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60

Query: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120
           VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG
Sbjct: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120

Query: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163
           LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR
Sbjct: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163


>gi|169162691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  342 bits (876), Expect = 1e-94
 Identities = 162/163 (99%), Positives = 163/163 (100%)

Query: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60
           MGVSASGGGDGERVSQPWRAAQKRRPGPW+PRSCALTHATGSHLGSGPLGWASARDSSWA
Sbjct: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWSPRSCALTHATGSHLGSGPLGWASARDSSWA 60

Query: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120
           VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG
Sbjct: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120

Query: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163
           LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR
Sbjct: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163


>gi|113411491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  340 bits (872), Expect = 3e-94
 Identities = 162/163 (99%), Positives = 162/163 (99%)

Query: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60
           MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA
Sbjct: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60

Query: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120
           VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTS GFHVRRPNAPRLPPPIPPFG
Sbjct: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSLGFHVRRPNAPRLPPPIPPFG 120

Query: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163
           LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR
Sbjct: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163


>gi|169162687 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  340 bits (872), Expect = 3e-94
 Identities = 162/163 (99%), Positives = 162/163 (99%)

Query: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60
           MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA
Sbjct: 1   MGVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWA 60

Query: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFG 120
           VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTS GFHVRRPNAPRLPPPIPPFG
Sbjct: 61  VFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSLGFHVRRPNAPRLPPPIPPFG 120

Query: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163
           LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR
Sbjct: 121 LAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 35.0 bits (79), Expect = 0.029
 Identities = 32/104 (30%), Positives = 36/104 (34%), Gaps = 18/104 (17%)

Query: 11  GERVSQPWRAAQKRRPGPWAPRS---CALTHATGSHLGSGPLGWASARDSSWAV----FP 63
           G    +P  A ++R  G    R     AL      HL S  LG    R   WA+    FP
Sbjct: 627 GTEAGRPRLAGERRGAGDGRARDFRRIALAAPQFPHLESNTLGRGRPRPGDWALQATDFP 686

Query: 64  GLDSPAR-----------LCAGFPLPLAGRRPGCRLARFSRAPA 96
               PA              AGF  P A R PG  L   S  PA
Sbjct: 687 DATKPALGAALRRGPIVGPAAGFAAPAAERDPGAELNHLSALPA 730



 Score = 29.6 bits (65), Expect = 1.2
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 117 PPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMA 161
           PP  L G T ATSA++P      P S+ +S +  +  +  +PPM+
Sbjct: 62  PPLMLPGPTIATSATRP-----PPASNEVSTSVLSSTITPAPPMS 101


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score = 34.7 bits (78), Expect = 0.037
 Identities = 40/150 (26%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 14  VSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAVFPGLDSPARLCA 73
           ++  W   Q   P P+A  SC +  A            A+A  ++ A  PG    A +  
Sbjct: 200 LNNSWPLPQPPSPMPYA--SCQMAAAA-----------AAAAAAAAAAGPGSPGAAAVVK 246

Query: 74  GFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIP-PFGLAGATFATSASQ 132
           G   P A   P  R+   +  P   +    +  P A   PPP P P   A    A +A  
Sbjct: 247 GLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLHAAAAPP 306

Query: 133 PFLVRCSPRSHSLSAAKPTGQVRLSPPMAA 162
           P     +P  H  +AA P GQ+  + P  A
Sbjct: 307 P-----APPHHG-AAAPPPGQLSPASPATA 330


>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
           sapiens]
          Length = 999

 Score = 34.3 bits (77), Expect = 0.049
 Identities = 43/149 (28%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 1   MGVSAS-GGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSW 59
           +GV  S GGG G       R A    P P  P       A GS  GS   G+   +    
Sbjct: 30  LGVGRSKGGGGGRAGGPERRTADTPSPSPPPPVGTGNAPARGSGAGSRWSGFKKRKQVLD 89

Query: 60  AVFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPF 119
            VF    S   LC   P PL    PG       RA   ++    +R    P +  P    
Sbjct: 90  RVFS--SSQPNLCCSSPEPL---EPG----GAGRAEQGSTLRRRIREHLLPAVKGPAAAS 140

Query: 120 GLAGATFATSASQPFLVRCSPRSHSLSAA 148
           G AG T     S       S  S SLS++
Sbjct: 141 GAAGGTPPGGRSPDSAPSSSSASSSLSSS 169


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 33.9 bits (76), Expect = 0.064
 Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 67  SPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFGLAGATF 126
           +PA    G P P +   PG   +   RAP T+  G     P AP   P +P   L+ A+ 
Sbjct: 766 APAAASPGPPPPASP--PGAPAS--PRAPRTSPYG---GLPAAPLAGPALPARRLSRASR 818

Query: 127 ATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMAAR 163
             SASQP L   +P   + +    +   RL P  AAR
Sbjct: 819 PLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAAR 855


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 33.5 bits (75), Expect = 0.084
 Identities = 31/104 (29%), Positives = 35/104 (33%), Gaps = 18/104 (17%)

Query: 11  GERVSQPWRAAQKRRPGPWAPRS---CALTHATGSHLGSGPLGWASARDSSWAV----FP 63
           G    +P  A ++R  G    R     AL      HL S  LG    R   W +    FP
Sbjct: 627 GTEAGRPRLAGERRGAGDGRARDFRRIALAAPQFPHLESNTLGRGRPRPGDWTLQATDFP 686

Query: 64  GLDSPAR-----------LCAGFPLPLAGRRPGCRLARFSRAPA 96
               PA              AGF  P A R PG  L   S  PA
Sbjct: 687 DATKPALGAALRRGPIVGPAAGFAAPAAERDPGAELNHLSALPA 730



 Score = 29.6 bits (65), Expect = 1.2
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 117 PPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPPMA 161
           PP  L G T ATSA++P      P S+ +S +  +  +  +PPM+
Sbjct: 62  PPLMLPGPTIATSATRP-----PPASNEVSTSVLSSTITPAPPMS 101


>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 39/113 (34%), Positives = 44/113 (38%), Gaps = 23/113 (20%)

Query: 6   SGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAVFPGL 65
           SG   G+R S   RA     P P AP S + + ++GS  G G         S  A  P L
Sbjct: 26  SGVQGGQRNSTSARAPP---PPPLAPSSSSSSGSSGSSGGGG---------SGSAGQPTL 73

Query: 66  DSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPP 118
            S   L  G     A  R G       RA  T  R    R P  P LPPP PP
Sbjct: 74  GS--MLAVGSAARRASERAG------GRAGGTALRA---REPPPPLLPPPSPP 115


>gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]
          Length = 1385

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 20/108 (18%)

Query: 53   SARDSSWAVFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAP---ATTSRGFHVRRPNA 109
            S R +SW   P L+ P    A              +  FSR P    +TS   ++R P++
Sbjct: 1231 SPRSNSWRQPPWLNQPTGFYAS-----------SSVQDFSRPPPQLVSTSNRAYMRNPSS 1279

Query: 110  PRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLS 157
              +PPP         T   +   P     +PRSHS SA++   Q+R S
Sbjct: 1280 S-VPPPSAGSVKTSTTGVATTQSP-----TPRSHSPSASQSGSQLRNS 1321


>gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens]
          Length = 1349

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 20/106 (18%)

Query: 53   SARDSSWAVFPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAP---ATTSRGFHVRRPNA 109
            S R +SW   P L+ P    A              +  FSR P    +TS   ++R P++
Sbjct: 1182 SPRSNSWRQPPWLNQPTGFYAS-----------SSVQDFSRPPPQLVSTSNRAYMRNPSS 1230

Query: 110  PRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQVR 155
              +PPP         T   +   P     +PRSHS SA++   Q+R
Sbjct: 1231 S-VPPPSAGSVKTSTTGVATTQSP-----TPRSHSPSASQSGSQLR 1270


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 32.7 bits (73), Expect = 0.14
 Identities = 40/139 (28%), Positives = 49/139 (35%), Gaps = 11/139 (7%)

Query: 2   GVSASGGGDGERVSQPWRAAQKRRPGPWAP----RSCALTHATGSHLGSGPLGWASARDS 57
           GV A+G   G   + P   AQ+  P P  P     + A        L +  LG A   D 
Sbjct: 20  GVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSALGLGGAGDTDE 79

Query: 58  SWAVFPGLDSPARLCAGF---PLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPP 114
             A   G  +      G    P+P  G   G   A  + APA       +  PNA   PP
Sbjct: 80  EGAAGDGAAAAGGADGGAAPEPVPPDGPEAG---APPTLAPAVAPGSLPLLDPNASP-PP 135

Query: 115 PIPPFGLAGATFATSASQP 133
           P PP       FA  A  P
Sbjct: 136 PPPPRPSPPDVFAGFAPHP 154


>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
          Length = 1397

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 24  RRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAVFPGLDSPARLCAGFPLPLAGRR 83
           R P  W+     +  A  +HL +  LG +  R S  A FP L S  R    FP P   R 
Sbjct: 126 RSPAAWSDPGLRVPPAARAHLDNSSLGMSQPRPSPGA-FPHLSSEPRTPRAFPEP-GSRV 183

Query: 84  PGCRL 88
           P  RL
Sbjct: 184 PPSRL 188


>gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo
           sapiens]
          Length = 408

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 64  GLDSPARLC--AGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFGL 121
           GL + ++LC  +  P+P     P  RL   S   A       + RP +P  P  I P   
Sbjct: 10  GLVTKSQLCLWSREPVPSRQAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARP 69

Query: 122 A------GATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPP 159
                  G   A  A QP   R  PR  SL    P+ + R  PP
Sbjct: 70  GARPPRPGRPLAPRARQPVPHRAVPRQGSLREPLPSRRGRRGPP 113


>gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo
           sapiens]
          Length = 408

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 64  GLDSPARLC--AGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFGL 121
           GL + ++LC  +  P+P     P  RL   S   A       + RP +P  P  I P   
Sbjct: 10  GLVTKSQLCLWSREPVPSRQAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARP 69

Query: 122 A------GATFATSASQPFLVRCSPRSHSLSAAKPTGQVRLSPP 159
                  G   A  A QP   R  PR  SL    P+ + R  PP
Sbjct: 70  GARPPRPGRPLAPRARQPVPHRAVPRQGSLREPLPSRRGRRGPP 113


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 17/78 (21%)

Query: 92  SRAPATTSRGFHVRRP----NAPRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSA 147
           S +P+ +  G H+  P     AP+ PPP PP              P  +    RSH L  
Sbjct: 811 SPSPSASKVGVHLLEPATRDGAPQPPPPPPP---------PPPPMPLQLEAHLRSHGLEP 861

Query: 148 AKPTGQVR----LSPPMA 161
           A P+ ++R    L PP A
Sbjct: 862 AAPSPRLRPEESLDPPGA 879



 Score = 27.7 bits (60), Expect = 4.6
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 76   PLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRL--PPPIPPFGLAGATFATSA 130
            PL  AG  P     + S  P+  +RG   + P  P +  PPP   FGL GA  A  +
Sbjct: 1297 PLYQAGLTPPLSPPK-SVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAES 1352


>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 49/197 (24%), Positives = 68/197 (34%), Gaps = 39/197 (19%)

Query: 2   GVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAV 61
           G +A G G      QP R    + PG  AP          +HL  GP      R ++   
Sbjct: 87  GAAALGAG----AQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHG 142

Query: 62  FPGLDSP-----------------ARLCAGFP-LPLAGR-RPGCRLAR--FSRAPATTSR 100
            P  ++P                 ARL  G P  P AG  R GC   R    + P   S 
Sbjct: 143 LPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLRPLLLQPPPMLSP 202

Query: 101 GF--------HVRRPN------APRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLS 146
           G         H R  +      AP LPPP PP     +  + + +   L      + +L+
Sbjct: 203 GLAQSPGVELHARTLSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLAEAHTRALT 262

Query: 147 AAKPTGQVRLSPPMAAR 163
            A+  G+    P +  R
Sbjct: 263 PARGGGEGDPGPIVGGR 279


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 27/125 (21%)

Query: 7   GGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAVFPGLD 66
           GG       +PWR A +RR     P+ C                W  AR+S  A    L 
Sbjct: 131 GGASRPLAGEPWREAARRR-----PQQCP--------------QWGRARESRSA---ALA 168

Query: 67  SPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFGLAGATF 126
           SP    +  P   A R PG R     R     + G    R   PR+ PP  P G +G   
Sbjct: 169 SPR--VSNAPTTPASRNPGLRAQ--ERQSGRRAAGGGGARAEPPRV-PPCRPAGCSGGNR 223

Query: 127 ATSAS 131
           +  A+
Sbjct: 224 SRRAA 228


>gi|42544243 dynamin 3 isoform a [Homo sapiens]
          Length = 863

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 6/64 (9%)

Query: 76  PLPLAGRRP--GCRLARFSR----APATTSRGFHVRRPNAPRLPPPIPPFGLAGATFATS 129
           P P   RRP     LAR +     APA  S G H   P  P  P P+PPF  +  +F   
Sbjct: 766 PSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSGAPPVPFRPGPLPPFPSSSDSFGAP 825

Query: 130 ASQP 133
              P
Sbjct: 826 PQVP 829


>gi|209915561 dynamin 3 isoform b [Homo sapiens]
          Length = 859

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 6/64 (9%)

Query: 76  PLPLAGRRP--GCRLARFSR----APATTSRGFHVRRPNAPRLPPPIPPFGLAGATFATS 129
           P P   RRP     LAR +     APA  S G H   P  P  P P+PPF  +  +F   
Sbjct: 762 PSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSGAPPVPFRPGPLPPFPSSSDSFGAP 821

Query: 130 ASQP 133
              P
Sbjct: 822 PQVP 825


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 33/126 (26%), Positives = 40/126 (31%), Gaps = 22/126 (17%)

Query: 2   GVSASGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSHLGSGPLGWASARDSSWAV 61
           GV  +GG      +       +R P P    S           GS  L  + +    WA 
Sbjct: 131 GVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAA 190

Query: 62  FPGLDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSRGFHVRRPNAPRLPPPIPPFGL 121
            PG  +P              RPG        AP T   GF V  P A       PP  +
Sbjct: 191 MPGPGAP--------------RPG--------APGTWPVGFAVAAPPAAAASVAPPPPAV 228

Query: 122 AGATFA 127
           AGA  A
Sbjct: 229 AGAPAA 234


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 6   SGGGDGERVSQPWRAAQKRRPGPWAPRSCALTHATGSH-LGSGPLGWASARDSSWAVFPG 64
           SG G G     P+ +A    PGP  P S   +  + S   GS   G  + R  S  +  G
Sbjct: 38  SGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLL-G 96

Query: 65  LDSPARLCAGFPLPLAGRRPGCRLARFSRAPATTSR------GFHVRRPNAPRLPPP 115
           L  P R      LPLA   PG   A  +RA    +R      G  + RP AP  P P
Sbjct: 97  LGGPPRPFVVLLLPLAS--PGAPPAAPTRASPLGARASPPRSGVSLARP-APGCPRP 150


>gi|4506943 short stature homeobox isoform SHOXa [Homo sapiens]
          Length = 292

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 108 NAPRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSAA 148
           +AP L  P PPFGL  A+ A SAS   +V  + +S+S +++
Sbjct: 235 HAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSS 275


>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 445

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 78  PLAGRRPGCRLARFSRAPATTSRGFHVRRPNAP--RLPP--PIPPFGLAGATFATSASQP 133
           P  G R G    R + A      GF VR    P  RLPP  P PP   A     TS    
Sbjct: 195 PSGGVRSGAG-HRAATAEHQLGAGFSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPG 253

Query: 134 FLVRCSPRSHSLSAAKPTGQVR--LSPPMAAR 163
            L+ C P S  L    P  + R  L+PP   R
Sbjct: 254 RLLTCEPPSRKLPPPLPLCRSRWVLAPPPTVR 285


>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
           sapiens]
          Length = 178

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 40/139 (28%), Positives = 48/139 (34%), Gaps = 29/139 (20%)

Query: 33  SCALTHATGSHLGSGPLGWASARDSSWAVFPGLDSPARLCAGFPLPLAGRRP-------- 84
           +C LT A  +HLGSG          +    P +  P  +    P  +    P        
Sbjct: 4   NCPLTRACKNHLGSGEKVPTFPEPGA----PFMPRPQPVVVSTPCSVQCHTPELERGGPG 59

Query: 85  --GCRLARFSRAP--ATTSRGFHVRRPNA----PRLPPPIPPFGLAGATFATSASQPFLV 136
              CR +R  RA   A  S G H  RP A    PR  P  PP G   A        P L 
Sbjct: 60  PTDCRTSRRLRAAIVAAASPGLH-GRPAACRGHPRPTPARPPTGAPEA--------PALS 110

Query: 137 RCSPRSHSLSAAKPTGQVR 155
             + R H      P GQ R
Sbjct: 111 GRAARLHGAQRGAPAGQAR 129


>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
           sapiens]
          Length = 178

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 40/139 (28%), Positives = 48/139 (34%), Gaps = 29/139 (20%)

Query: 33  SCALTHATGSHLGSGPLGWASARDSSWAVFPGLDSPARLCAGFPLPLAGRRP-------- 84
           +C LT A  +HLGSG          +    P +  P  +    P  +    P        
Sbjct: 4   NCPLTRACKNHLGSGEKVPTFPEPGA----PFMPRPQPVVVSTPCSVQCHTPELERGGPG 59

Query: 85  --GCRLARFSRAP--ATTSRGFHVRRPNA----PRLPPPIPPFGLAGATFATSASQPFLV 136
              CR +R  RA   A  S G H  RP A    PR  P  PP G   A        P L 
Sbjct: 60  PTDCRTSRRLRAAIVAAASPGLH-GRPAACRGHPRPTPARPPTGAPEA--------PALS 110

Query: 137 RCSPRSHSLSAAKPTGQVR 155
             + R H      P GQ R
Sbjct: 111 GRAARLHGAQRGAPAGQAR 129


>gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 40/139 (28%), Positives = 48/139 (34%), Gaps = 29/139 (20%)

Query: 33  SCALTHATGSHLGSGPLGWASARDSSWAVFPGLDSPARLCAGFPLPLAGRRP-------- 84
           +C LT A  +HLGSG          +    P +  P  +    P  +    P        
Sbjct: 4   NCPLTRACKNHLGSGEKVPTFPEPGA----PFMPRPQPVVVSTPCSVQCHTPELERGGPG 59

Query: 85  --GCRLARFSRAP--ATTSRGFHVRRPNA----PRLPPPIPPFGLAGATFATSASQPFLV 136
              CR +R  RA   A  S G H  RP A    PR  P  PP G   A        P L 
Sbjct: 60  PTDCRTSRRLRAAIVAAASPGLH-GRPAACRGHPRPTPARPPTGAPEA--------PALS 110

Query: 137 RCSPRSHSLSAAKPTGQVR 155
             + R H      P GQ R
Sbjct: 111 GRAARLHGAQRGAPAGQAR 129


>gi|119943102 CREB binding protein isoform b [Homo sapiens]
          Length = 2404

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 94   APATTSRGFHVRRPNAPRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQ 153
            +P +   G   ++P+ P+ P P P          + A  P + R  P + ++S  KPT Q
Sbjct: 1846 SPTSAPPGTPTQQPSTPQTPQP-PAQPQPSPVSMSPAGFPSVARTQPPT-TVSTGKPTSQ 1903

Query: 154  VRLSPPMA 161
            V   PP A
Sbjct: 1904 VPAPPPPA 1911


>gi|119943104 CREB binding protein isoform a [Homo sapiens]
          Length = 2442

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 94   APATTSRGFHVRRPNAPRLPPPIPPFGLAGATFATSASQPFLVRCSPRSHSLSAAKPTGQ 153
            +P +   G   ++P+ P+ P P P          + A  P + R  P + ++S  KPT Q
Sbjct: 1884 SPTSAPPGTPTQQPSTPQTPQP-PAQPQPSPVSMSPAGFPSVARTQPPT-TVSTGKPTSQ 1941

Query: 154  VRLSPPMA 161
            V   PP A
Sbjct: 1942 VPAPPPPA 1949


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,642,079
Number of Sequences: 37866
Number of extensions: 508529
Number of successful extensions: 2689
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 2555
Number of HSP's gapped (non-prelim): 304
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.