SHOX 29445

Name: SHOX	Sequence: fasta or formatted (292aa)		NCBI GI: 4506943
Description: short stature homeobox isoform SHOXa		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [225aa] short stature homeobox isoform SHOXb
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 31 4 C cysteine 1.4 4 1 D aspartate 5.1 15 1 E glutamate 8.6 25 2 F phenylalanine 3.8 11 1 G glycine 8.2 24 8 H histidine 4.5 13 1 I isoleucine 2.1 6 1 K lysine 7.2 21 2 L leucine 9.9 29 1 M methionine 2.1 6 1 N asparagine 3.4 10 1 P proline 4.1 12 4 Q glutamine 5.1 15 2 R arginine 6.5 19 2 S serine 6.8 20 2 T threonine 3.4 10 1 V valine 5.1 15 2 W tryptophan 0.3 1 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short stature homeobox isoform SHOXa SHOX 0.722 short stature homeobox isoform SHOXb SHOX2 0.562 short stature homeobox 2 isoform a SHOX2 0.520 short stature homeobox 2 isoform b RAX 0.142 retina and anterior neural fold homeobox ARX 0.142 aristaless related homeobox DRGX 0.132 dorsal root ganglia homeobox PAX7 0.128 paired box 7 isoform 1 PAX7 0.128 paired box 7 isoform 2 PAX7 0.128 paired box 7 isoform 3 PAX3 0.126 paired box 3 isoform PAX3i PAX3 0.126 paired box 3 isoform PAX3g PAX3 0.126 paired box 3 isoform PAX3h PAX3 0.126 paired box 3 isoform PAX3e PAX3 0.126 paired box 3 isoform PAX3d PAX3 0.126 paired box 3 isoform PAX3 PRRX2 0.126 paired related homeobox 2 PITX3 0.125 paired-like homeodomain 3 PRRX1 0.125 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.125 paired mesoderm homeobox 1 isoform pmx-1b OTP 0.121 PREDICTED: orthopedia homeobox PHOX2B 0.121 paired-like homeobox 2b PHOX2A 0.121 paired-like homeobox 2a OTP 0.121 orthopedia homeobox RAX2 0.119 retina and anterior neural fold homeobox 2 UNCX 0.119 UNC homeobox ALX4 0.117 aristaless-like homeobox 4 OTX2 0.116 orthodenticle homeobox 2 isoform b OTX2 0.116 orthodenticle homeobox 2 isoform a DMBX1 0.114 diencephalon/mesencephalon homeobox 1 isoform a [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.