Guide to the Human Genome
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Search of human proteins with 169162203

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162203 PREDICTED: hypothetical protein [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169162203 PREDICTED: hypothetical protein [Homo sapiens]           248   1e-66
gi|13128990 hypothetical protein LOC79000 [Homo sapiens]               30   0.31 
gi|169201741 PREDICTED: hypothetical protein [Homo sapiens]            29   0.70 
gi|169201345 PREDICTED: hypothetical protein [Homo sapiens]            29   0.70 
gi|169188544 PREDICTED: hypothetical protein [Homo sapiens]            29   0.70 
gi|24308227 zinc finger protein 687 [Homo sapiens]                     29   0.70 
gi|13129006 nucleolar protein GU2 [Homo sapiens]                       29   0.91 
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               28   1.2  
gi|72534754 ferredoxin 1-like [Homo sapiens]                           28   1.6  
gi|239757317 PREDICTED: hypothetical protein [Homo sapiens]            28   2.0  
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    28   2.0  
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    28   2.0  
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot...    28   2.0  
gi|58219030 hypothetical protein LOC399726 [Homo sapiens]              28   2.0  
gi|32479521 dishevelled 1 [Homo sapiens]                               27   2.6  
gi|4759050 ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...    27   2.6  
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            27   2.6  
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            27   2.6  
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            27   2.6  
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ...    27   2.6  
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ...    27   3.5  
gi|31317236 GSK-3 binding protein FRAT1 [Homo sapiens]                 27   3.5  
gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]            27   4.5  
gi|169168044 PREDICTED: hypothetical protein [Homo sapiens]            27   4.5  
gi|169167512 PREDICTED: hypothetical protein [Homo sapiens]            27   4.5  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  27   4.5  
gi|56549643 nucleoporin 98kD isoform 3 [Homo sapiens]                  27   4.5  
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]                  27   4.5  

>gi|169162203 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 117

 Score =  248 bits (632), Expect = 1e-66
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MDAGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAI 60
           MDAGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAI
Sbjct: 1   MDAGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAI 60

Query: 61  RGVYYNNMMVKNLAHKKHLFKPTIFPGQGKVTVSMSQQILKTHIKLLQAWLLWQPEK 117
           RGVYYNNMMVKNLAHKKHLFKPTIFPGQGKVTVSMSQQILKTHIKLLQAWLLWQPEK
Sbjct: 61  RGVYYNNMMVKNLAHKKHLFKPTIFPGQGKVTVSMSQQILKTHIKLLQAWLLWQPEK 117


>gi|13128990 hypothetical protein LOC79000 [Homo sapiens]
          Length = 357

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 53  RGGPERAIRGVYYNNMMVKNLAHKKHLFKP-----TIFPGQGKVTVSMSQQILKT---HI 104
           R GPE    GV+ +   +K    + HL KP     T+ PG+ K  +  +Q+   +   H 
Sbjct: 3   RTGPEEEACGVWLDAAALKRRKVQTHLIKPGTKMLTLLPGERKANIYFTQRRAPSTGIHQ 62

Query: 105 KLLQAWLLWQPEK 117
           + + ++   QP K
Sbjct: 63  RSIASFFTLQPGK 75


>gi|169201741 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 3   AGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRG-GPERAI 60
           A   RG P        AEG         S C   WRR R++GA  R  P RG G ER +
Sbjct: 100 AAGSRGEPAGGRGCCTAEG---------SSCGHPWRRERRQGAATR-GPSRGPGGERRV 148


>gi|169201345 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 3   AGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRG-GPERAI 60
           A   RG P        AEG         S C   WRR R++GA  R  P RG G ER +
Sbjct: 100 AAGSRGEPAGGRGCCTAEG---------SSCGHPWRRERRQGAATR-GPSRGPGGERRV 148


>gi|169188544 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 3   AGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRG-GPERAI 60
           A   RG P        AEG         S C   WRR R++GA  R  P RG G ER +
Sbjct: 100 AAGSRGEPAGGRGCCTAEG---------SSCGHPWRRERRQGAATR-GPSRGPGGERRV 148


>gi|24308227 zinc finger protein 687 [Homo sapiens]
          Length = 1237

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 6    GRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGG 55
            GRG   A   +A A+G GR +  +   C  +   T      PR  P  GG
Sbjct: 1059 GRGTTLARGSSARAQGPGRKRRQSSDSCSEEPDSTTPPAKSPRGGPGSGG 1108


>gi|13129006 nucleolar protein GU2 [Homo sapiens]
          Length = 737

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 3   AGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERA 59
           +GW  GR   S  + G  G GRS   +  G +S  R+  +R +  R     GG +R+
Sbjct: 680 SGWSSGRSGRSGRSGGRSG-GRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRS 735


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 8   GRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGA-RPRTSP--HRGGPER 58
           GRP      AG  G GR     +S      RR R+RGA +PRTSP    GGP R
Sbjct: 233 GRPPTDSPDAG--GAGRPLDGYISALL---RRRRRRGAGQPRTSPGGADGGPRR 281


>gi|72534754 ferredoxin 1-like [Homo sapiens]
          Length = 183

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 1  MDAGWGRGRPQASLLTAGAEGTGRSKSHTLSG-----CQSDWRRTRKRGARPRTSPHRGG 55
          M A   RG   A +L   A GT  ++    SG          R+ +  G+RP      GG
Sbjct: 1  MAASMARGGVSARVLLQAARGTWWNRPGGTSGSGEGVALGTTRKFQATGSRPAGEEDAGG 60

Query: 56 PER 58
          PER
Sbjct: 61 PER 63


>gi|239757317 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 198

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 4   GWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERA 59
           G G         TAG    GR K   + G  + W R       PRTS  R GP  A
Sbjct: 138 GGGESGTTCGAATAGTGPGGRGKVAAVGGPGTTWAR------GPRTSSPRAGPGAA 187


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 7   RGRPQASLLTAGAEGTGRSKSHTLSGCQSD------WRRTRKRGARPRTSP 51
           RGR +     +G  G      H+ S C+S       W + R R A PR SP
Sbjct: 106 RGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASP 156


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 7   RGRPQASLLTAGAEGTGRSKSHTLSGCQSD------WRRTRKRGARPRTSP 51
           RGR +     +G  G      H+ S C+S       W + R R A PR SP
Sbjct: 106 RGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASP 156


>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
           G-T [Homo sapiens]
          Length = 392

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 38  RRTRKRGARPRTSPHRGGPE 57
           R TR  G  PR SP RGGP+
Sbjct: 109 RGTRGGGGGPRRSPSRGGPD 128


>gi|58219030 hypothetical protein LOC399726 [Homo sapiens]
          Length = 136

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 17/75 (22%)

Query: 2   DAGWGRGRPQASLLTAGAEGTGRSKSHTLSGCQSD--------W-------RRTRKRGAR 46
           D G G  RP A       E TG+ +   + G  +         W       R TR  G+ 
Sbjct: 29  DRGPGAARPAAR--GGAGETTGQQRPLQVPGASAAAARTRLLRWHHRVPSPRATRSPGSI 86

Query: 47  PRTSPHRGGPERAIR 61
            RTSP  GGP+R  R
Sbjct: 87  RRTSPCSGGPDRPER 101


>gi|32479521 dishevelled 1 [Homo sapiens]
          Length = 670

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 17  AGAEGTGRSKSHTL-SGCQSDWRR----TRKRGARPRTSPHRGGP 56
           AGA G+G    HT  SG  S WR        RG+ PR+      P
Sbjct: 570 AGAGGSGSESDHTAPSGVGSSWRERPAGQLSRGSSPRSQASATAP 614


>gi|4759050 ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Homo
           sapiens]
          Length = 740

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 9   RPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPE 57
           R  A+ L AG +G    K H+      DW +  +R   P   P  G PE
Sbjct: 305 RNPANRLGAGPDGVEEIKRHSFFST-IDWNKLYRREIHPPFKPATGRPE 352


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 7   RGRPQASLL-----TAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIR 61
           RGR Q   L      AG    GR+     +      R+ RKRG  P  SP  G     +R
Sbjct: 258 RGRRQGCALGSPPIPAGPAAPGRAGERRAA------RQWRKRGGGPGVSPREGAQGEGVR 311

Query: 62  G 62
           G
Sbjct: 312 G 312


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 7   RGRPQASLL-----TAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIR 61
           RGR Q   L      AG    GR+     +      R+ RKRG  P  SP  G     +R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAA------RQWRKRGGGPGVSPREGAQGEGVR 405

Query: 62  G 62
           G
Sbjct: 406 G 406


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 7   RGRPQASLL-----TAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIR 61
           RGR Q   L      AG    GR+     +      R+ RKRG  P  SP  G     +R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAA------RQWRKRGGGPGVSPREGAQGEGVR 405

Query: 62  G 62
           G
Sbjct: 406 G 406


>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
           sapiens]
          Length = 1048

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query: 81  KPTIFPGQGKVTVSMSQQI 99
           K  +FPG+GKV +S+ +QI
Sbjct: 807 KSAVFPGEGKVKMSVEEQI 825


>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 412

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 6   GRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPH 52
           G G   A +L   A G GR     L    S+W+  R RG   + SPH
Sbjct: 255 GVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGL--QNSPH 299


>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 446

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 6   GRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPH 52
           G G   A +L   A G GR     L    S+W+  R RG   + SPH
Sbjct: 289 GVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGL--QNSPH 333


>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
           sapiens]
          Length = 487

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 6   GRGRPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPH 52
           G G   A +L   A G GR     L    S+W+  R RG   + SPH
Sbjct: 289 GVGAAGAEILQLLALGEGRGPKQLLPSNFSEWQAHRSRGL--QNSPH 333


>gi|31317236 GSK-3 binding protein FRAT1 [Homo sapiens]
          Length = 279

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%)

Query: 10  PQASLLTAGAEGTGRSK-SHTLSG-CQSDWRR--------TRKRGARPRTSPHRGGPERA 59
           PQA L   G  G G+      LSG C+  W R         ++RG++P T      P R 
Sbjct: 145 PQADL--DGPPGAGKQGIPQPLSGPCRRGWLRGAAASRRLQQRRGSQPETRTGDDDPHRL 202

Query: 60  IRGVYYNNMMVKNLAHKKH 78
           ++ +  +  ++K    + H
Sbjct: 203 LQQLVLSGNLIKEAVRRLH 221


>gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 359

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 21  GTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGV----YYNNMMVKNLAHK 76
           G    K+ TL GC    R T    ARPR +  RG P   + G       ++   K    +
Sbjct: 146 GHHADKAVTLGGCP---RSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEER 202

Query: 77  KHLF-KPTIFPGQGKVTVSMSQQI 99
              F KP + PG    T    Q++
Sbjct: 203 ARRFRKPLLPPGWSPRTTDPGQEV 226


>gi|169168044 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 359

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 21  GTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGV----YYNNMMVKNLAHK 76
           G    K+ TL GC    R T    ARPR +  RG P   + G       ++   K    +
Sbjct: 146 GHHADKAVTLGGCP---RSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEER 202

Query: 77  KHLF-KPTIFPGQGKVTVSMSQQI 99
              F KP + PG    T    Q++
Sbjct: 203 ARRFRKPLLPPGWSPRTTDPGQEV 226


>gi|169167512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 442

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 21  GTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGV----YYNNMMVKNLAHK 76
           G    K+ TL GC    R T    ARPR +  RG P   + G       ++   K    +
Sbjct: 229 GHHADKAVTLGGCP---RSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEER 285

Query: 77  KHLF-KPTIFPGQGKVTVSMSQQI 99
              F KP + PG    T    Q++
Sbjct: 286 ARRFRKPLLPPGWSPRTTDPGQEV 309


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 9   RPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGVYYNNM 68
           RP   +     + TG +KSH   G   D          P  +     P+++I+ +   N+
Sbjct: 538 RPATRVRPKALQTTGTAKSHLFDGLDDD---------EPSLANGAFMPKKSIKKLVLKNL 588

Query: 69  MVKNL-----AHKKHLFKPTIFPGQGKVTVSMSQQILKTH 103
              NL        ++L  P+ +P  G+    +S+ + + H
Sbjct: 589 NNSNLFSPVNRDSENLASPSEYPENGERFSFLSKPVDENH 628


>gi|56549643 nucleoporin 98kD isoform 3 [Homo sapiens]
          Length = 937

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 9   RPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGVYYNNM 68
           RP   +     + TG +KSH   G   D          P  +     P+++I+ +   N+
Sbjct: 555 RPATRVRPKALQTTGTAKSHLFDGLDDD---------EPSLANGAFMPKKSIKKLVLKNL 605

Query: 69  MVKNL-----AHKKHLFKPTIFPGQGKVTVSMSQQILKTH 103
              NL        ++L  P+ +P  G+    +S+ + + H
Sbjct: 606 NNSNLFSPVNRDSENLASPSEYPENGERFSFLSKPVDENH 645


>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
          Length = 1800

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 9   RPQASLLTAGAEGTGRSKSHTLSGCQSDWRRTRKRGARPRTSPHRGGPERAIRGVYYNNM 68
           RP   +     + TG +KSH   G   D          P  +     P+++I+ +   N+
Sbjct: 538 RPATRVRPKALQTTGTAKSHLFDGLDDD---------EPSLANGAFMPKKSIKKLVLKNL 588

Query: 69  MVKNL-----AHKKHLFKPTIFPGQGKVTVSMSQQILKTH 103
              NL        ++L  P+ +P  G+    +S+ + + H
Sbjct: 589 NNSNLFSPVNRDSENLASPSEYPENGERFSFLSKPVDENH 628


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,187,435
Number of Sequences: 37866
Number of extensions: 227440
Number of successful extensions: 767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 755
Number of HSP's gapped (non-prelim): 41
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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