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Search of human proteins with 169161962
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169161962 PREDICTED: hypothetical protein [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169161962 PREDICTED: hypothetical protein [Homo sapiens] 513 e-146
gi|169162723 PREDICTED: hypothetical protein [Homo sapiens] 513 e-146
gi|169162422 PREDICTED: hypothetical protein [Homo sapiens] 406 e-113
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 39 0.003
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 39 0.003
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 39 0.003
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 39 0.003
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 37 0.017
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 36 0.029
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 36 0.029
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 34 0.14
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 33 0.19
gi|153792074 proline rich 12 [Homo sapiens] 33 0.25
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 33 0.32
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 33 0.32
gi|7019535 B-cell linker isoform 1 [Homo sapiens] 33 0.32
gi|4505835 polycystin 2 [Homo sapiens] 32 0.42
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 32 0.42
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 32 0.42
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 32 0.42
gi|54873613 agrin [Homo sapiens] 32 0.55
gi|210032580 SET domain containing 1B [Homo sapiens] 32 0.55
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 32 0.72
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 31 0.93
gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 31 0.93
gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 31 0.93
gi|38198663 potassium channel tetramerisation domain containing ... 31 0.93
>gi|169161962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 258
Score = 513 bits (1322), Expect = e-146
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF
Sbjct: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
Query: 61 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA
Sbjct: 61 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
Query: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR
Sbjct: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
Query: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG
Sbjct: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
Query: 241 GIKCSEVEITLKTGPLAL 258
GIKCSEVEITLKTGPLAL
Sbjct: 241 GIKCSEVEITLKTGPLAL 258
>gi|169162723 PREDICTED: hypothetical protein [Homo sapiens]
Length = 258
Score = 513 bits (1322), Expect = e-146
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF
Sbjct: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
Query: 61 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA
Sbjct: 61 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
Query: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR
Sbjct: 121 GHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELR 180
Query: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG
Sbjct: 181 GLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVG 240
Query: 241 GIKCSEVEITLKTGPLAL 258
GIKCSEVEITLKTGPLAL
Sbjct: 241 GIKCSEVEITLKTGPLAL 258
>gi|169162422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 406 bits (1043), Expect = e-113
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 57 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 116
SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS
Sbjct: 48 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 107
Query: 117 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS
Sbjct: 108 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167
Query: 177 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 236
CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE
Sbjct: 168 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 227
Query: 237 QNVGGIKCSEVEITLKTGPLAL 258
QNVGGIKCSEVEITLKTGPLAL
Sbjct: 228 QNVGGIKCSEVEITLKTGPLAL 249
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 12/161 (7%)
Query: 56 GSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQ------SSKYPRLAA 109
G++ P Q + P + P+ P P P T + + +S+ PRL +
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRS 237
Query: 110 PGSVAPSAACAGHRRRLTRRS----PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPA 165
+ P A G R +R P P G AA PG + G L P+
Sbjct: 238 RAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPS 297
Query: 166 LSARDALLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGER 206
+ +DA S C G LR+ + ++ P A SG GER
Sbjct: 298 RARQDAWGLSGCATVG--LRRGDCDRAGSSQPPATSGNGER 336
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
+HS Q S S+ +++ P+ LFVA S S + L L G+ +
Sbjct: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 377
Query: 61 PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
PA P++S P C +L +P PTPA + S PR A P S AP++
Sbjct: 378 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 432
Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
C + PR G G A +PG S ++ G+L P P
Sbjct: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 491
Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
A + LLR+ R R + L EAA P
Sbjct: 492 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 526
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
+HS Q S S+ +++ P+ LFVA S S + L L G+ +
Sbjct: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 365
Query: 61 PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
PA P++S P C +L +P PTPA + S PR A P S AP++
Sbjct: 366 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 420
Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
C + PR G G A +PG S ++ G+L P P
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 479
Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
A + LLR+ R R + L EAA P
Sbjct: 480 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 514
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
+HS Q S S+ +++ P+ LFVA S S + L L G+ +
Sbjct: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 365
Query: 61 PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
PA P++S P C +L +P PTPA + S PR A P S AP++
Sbjct: 366 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 420
Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
C + PR G G A +PG S ++ G+L P P
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 479
Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
A + LLR+ R R + L EAA P
Sbjct: 480 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 514
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
+HS Q S S+ +++ P+ LFVA S S + L L G+ +
Sbjct: 323 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL-----LVDRAAGGGAGSP 377
Query: 61 PACQRPASSTSP-CAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA-- 117
PA P++S P C +L +P PTPA + S PR A P S AP++
Sbjct: 378 PAPLAPSASGPPVCKSSEVLYE--RPQPTPAFS---SRTAGPPDPPRAARPSSAAPASRG 432
Query: 118 ------ACAGHRRRLTRRSPRPRKSRGRGAAN----ACLPGKSSHQERGVLVGCPSP--- 164
C + PR G G A +PG S ++ G+L P P
Sbjct: 433 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD-GLLTMLPGPPPV 491
Query: 165 -ALSARDALLRS-SCELRGLRLRKAKLFQEAAAAP 197
A + LLR+ R R + L EAA P
Sbjct: 492 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGP 526
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.0 bits (84), Expect = 0.017
Identities = 54/151 (35%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 55 AGSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYP 105
AGSR +RPA+ S A QP PL + L A++L SL + S+ P
Sbjct: 237 AGSRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPP 291
Query: 106 RLAAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQE 154
RLAAP GS APS + R RR RSP PR SRG A G +
Sbjct: 292 RLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV 351
Query: 155 RGVLVGCP--SPALSARDALLRSSCELRGLR 183
RG GC SP + A A + E R R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.0 bits (84), Expect = 0.017
Identities = 54/151 (35%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 55 AGSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYP 105
AGSR +RPA+ S A QP PL + L A++L SL + S+ P
Sbjct: 237 AGSRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPP 291
Query: 106 RLAAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQE 154
RLAAP GS APS + R RR RSP PR SRG A G +
Sbjct: 292 RLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV 351
Query: 155 RGVLVGCP--SPALSARDALLRSSCELRGLR 183
RG GC SP + A A + E R R
Sbjct: 352 RGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 37.0 bits (84), Expect = 0.017
Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 22/163 (13%)
Query: 60 FPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKY----QSSKYPRLAAPGSVAP 115
+P P SPC +P L+ PL + Y SK+P AA + A
Sbjct: 176 YPGSHYPEIVRSPC--KPPLNYETAPLQGNYVAFPSDPAYFRSLLCSKHPAAAAAAAAAA 233
Query: 116 SAACAGHRR----RLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDA 171
+AA A +++ P+P+ + G G PG S++ C A+D
Sbjct: 234 AAAAAAAAAAAYYQVSAAGPQPKAAAGAGG-----PGSLSYR-------CKRKRGGAKDC 281
Query: 172 LLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQ 214
LL R L L +AAAA A + A G L+
Sbjct: 282 LLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGATCLE 324
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 66 PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 125
P S +P A P P PTP TL S + S+ P + P S + SAA +
Sbjct: 347 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 400
Query: 126 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
+ S P P S+G + G S+ G L G SP LSA L S+
Sbjct: 401 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 457
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 66 PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 125
P S +P A P P PTP TL S + S+ P + P S + SAA +
Sbjct: 369 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 422
Query: 126 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
+ S P P S+G + G S+ G L G SP LSA L S+
Sbjct: 423 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 479
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 33.9 bits (76), Expect = 0.14
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 61 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 120
P P +S A +P L P A L ++L + P + PG V CA
Sbjct: 37 PGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVN----CA 92
Query: 121 GHRRRLTRRSPRPRKSRGR---GAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSC 177
LTR +P PR+S +A+A P + +E G P S+ + +
Sbjct: 93 VGSAMLTRAAPGPRRSEDEPPAASASAAPPPQRDEEEPD---GVPEKGKSSGPSARKGKG 149
Query: 178 ELRGLRLRKAK 188
++ +LR+ +
Sbjct: 150 QIEKRKLREKR 160
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 33.5 bits (75), Expect = 0.19
Identities = 46/155 (29%), Positives = 57/155 (36%), Gaps = 32/155 (20%)
Query: 5 QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIF-----PAGSRT 59
Q SKS + + D +PSST +F A TS+ SR L + + PA S +
Sbjct: 2186 QVSKSNNPE----DGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSS 2241
Query: 60 FPACQRPASST---------SPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKY------ 104
P SS SP H SP C + L LKY SS Y
Sbjct: 2242 LPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLFKLKYPSSPYSAHISK 2301
Query: 105 -PRLAAPGS-------VAPSAACAGHRRRLTRRSP 131
PR +P S APS A + R SP
Sbjct: 2302 SPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSP 2336
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.1 bits (74), Expect = 0.25
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 95 HSLKYQSSKYPRLAAPGSVAPSAACAGHRRR--LTRRSPRPRKSRGRGAANACLPGKSSH 152
H YQ+ P L+ P SV PS G + + T P P S G A +
Sbjct: 1295 HPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGAL----EAA 1350
Query: 153 QERGVLVGCPSPALSARDALLRS 175
+ G+ +GCPSP + L R+
Sbjct: 1351 ESEGLGLGCPSPCKRLDEELKRN 1373
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 32.7 bits (73), Expect = 0.32
Identities = 55/249 (22%), Positives = 86/249 (34%), Gaps = 53/249 (21%)
Query: 4 AQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPAC 63
AQ +S++ + T+ P P+ T F + VT+ + + I P+ + A
Sbjct: 1676 AQGGQSKTLRSSTVRAMPVPT-TPEFQSPVTTD-------QPISPEPITQPSCIKRQRAA 1727
Query: 64 QRPASSTSPCAHQPMLSPL--------------------CKPLPTPAITLLHSLKYQSSK 103
P S +P H+P +PL +P PA L +S+
Sbjct: 1728 GNPGSLAAPIDHKPCSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHASQ 1787
Query: 104 YPRLAAPG------SVAPSAACAGHRRRLTRRSPRPRKSRGRGAAN-------------A 144
++ G + P A+ + R T SP +K RG + A
Sbjct: 1788 IQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIKEEEEDTA 1847
Query: 145 CLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLALSGCG 204
PGK V P P RD + LR+ KL QE+ A + +G
Sbjct: 1848 EKPGKEED------VVTPKPGKRKRDQAEEEPNRIPSRSLRRTKLNQESTAPKVLFTGVV 1901
Query: 205 ERAGGRGAL 213
+ G R L
Sbjct: 1902 DARGERAVL 1910
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 32.7 bits (73), Expect = 0.32
Identities = 38/131 (29%), Positives = 46/131 (35%), Gaps = 14/131 (10%)
Query: 54 PAGSRT--FPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPG 111
PAG+R P PA+S H PLC P + A + + A P
Sbjct: 45 PAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPP 104
Query: 112 SVAPSAACAGHRRRLTRRSPRPRKSRGR--------GAANACLPGKSSHQERGVLVGCPS 163
AP R TRRSP P +RG GA A G S R + C
Sbjct: 105 CRAPGRG----RAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGG 160
Query: 164 PALSARDALLR 174
+L A LR
Sbjct: 161 TSLGAGSRALR 171
>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
Length = 456
Score = 32.7 bits (73), Expect = 0.32
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 1 MHSAQTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTF 60
+H ++S K P ++ P+S+ T+S +E + PA
Sbjct: 190 IHPTESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPP----PAAPSPL 245
Query: 61 P-ACQRPAS--STSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
P A ++P + T+P A Q S +C+ P PA +++ S + + A V P A
Sbjct: 246 PRAGKKPTTPLKTTPVASQQNASSVCEEKPIPA------ERHRGSSHRQEAVQSPVFPPA 299
Query: 118 ACAGHRRRLTRRSPRPRKSR-GRGAANACLPGKSSH-----QERGVL 158
H++ + P PR + G + LP SS+ QE GVL
Sbjct: 300 QKQIHQKPI----PLPRFTEGGNPTVDGPLPSFSSNSTISEQEAGVL 342
>gi|4505835 polycystin 2 [Homo sapiens]
Length = 968
Score = 32.3 bits (72), Expect = 0.42
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 157 VLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLA---------LSGCGERA 207
++ GC A+ A A CE RGL + ++ Q AA P A LS C +A
Sbjct: 29 LMAGCA--AVGASLAAPGGLCEQRGLEIEMQRIRQAAARDPPAGAAASPSPPLSSCSRQA 86
Query: 208 GGRGALQDSVVSEKLDFPGSEGQFGIVIEQNV 239
R E+ + G EG G+V+E +V
Sbjct: 87 WSRDNPGFEAEEEEEEVEGEEG--GMVVEMDV 116
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 32.3 bits (72), Expect = 0.42
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 5 QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
QT S +LP L PSS ++T + L L P+ S + C
Sbjct: 751 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 807
Query: 65 RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
P S+ + + P+LSP P P+P + + S P L++ S + S++
Sbjct: 808 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 867
Query: 125 RLTRRSPRP 133
+ SP P
Sbjct: 868 SSSSPSPPP 876
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 32.3 bits (72), Expect = 0.42
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 5 QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
QT S +LP L PSS ++T + L L P+ S + C
Sbjct: 952 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 1008
Query: 65 RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
P S+ + + P+LSP P P+P + + S P L++ S + S++
Sbjct: 1009 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 1068
Query: 125 RLTRRSPRP 133
+ SP P
Sbjct: 1069 SSSSPSPPP 1077
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 32.3 bits (72), Expect = 0.42
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 5 QTSKSESTKLPTLDERPSPSSTCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQ 64
QT S +LP L PSS ++T + L L P+ S + C
Sbjct: 952 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPA---PSSSASPHPCP 1008
Query: 65 RPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRR 124
P S+ + + P+LSP P P+P + + S P L++ S + S++
Sbjct: 1009 SPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSS 1068
Query: 125 RLTRRSPRP 133
+ SP P
Sbjct: 1069 SSSSPSPPP 1077
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 32.0 bits (71), Expect = 0.55
Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 24/147 (16%)
Query: 76 QPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRK 135
QP+ P+ + +H+ +Q S + A P A CA
Sbjct: 564 QPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCETCGDAVCA--------------- 608
Query: 136 SRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAA 195
+A C+ + H P P + S+CELR + +EA A
Sbjct: 609 FGAVCSAGQCVCPRCEHPP-------PGPVCGSDGVTYGSACELREAACLQQTQIEEARA 661
Query: 196 APLALSGCGERAGGRGALQDSVVSEKL 222
P + CG +GG G+ +D ++L
Sbjct: 662 GPCEQAECG--SGGSGSGEDGDCEQEL 686
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.0 bits (71), Expect = 0.55
Identities = 39/144 (27%), Positives = 52/144 (36%), Gaps = 33/144 (22%)
Query: 54 PAGSRTFPACQRPASS----TSPCAHQPMLS---PLCKPLPTPAITLLHSLKYQSSKYPR 106
P+G P C P + P A +L PL PLP P L ++ ++ P
Sbjct: 1396 PSGPLLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLPLPLALPAVLRAQARAPT 1455
Query: 107 LAAPGSVAPSAACAGHRRR---LTRRSP-----------RPRKSRGRGAANACLPGK--- 149
P AP A+C +R RRSP RP G LPG+
Sbjct: 1456 PLPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQT 1515
Query: 150 ----SSHQERGVLV-----GCPSP 164
S+H R V + G P+P
Sbjct: 1516 PVFPSTHDPRTVTLDFRNAGIPAP 1539
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 0.72
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 17/71 (23%)
Query: 54 PAGSRTFPACQRPASSTS---PCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAP 110
PA R PA PA++ + P A P + LC P A+ P A+P
Sbjct: 146 PAAVRP-PAAGPPAAALAAVYPAAADPSAASLCAASPLAAV-------------PAAASP 191
Query: 111 GSVAPSAACAG 121
+VAP+A C G
Sbjct: 192 AAVAPAAVCPG 202
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 31.2 bits (69), Expect = 0.93
Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 22/173 (12%)
Query: 12 TKLPTLDERPSPSS--TCLFVAMVTSSVSRQKLFEVHNLSQIIFPAGSRTFPACQRPASS 69
T+ PT RP P+S +A+ S R+ L + +R + ++P
Sbjct: 145 TRGPT-GPRPGPASPGALALIALRVSDPLRKALRQ------------TRVLKSRRKPRRL 191
Query: 70 TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRR 129
C ++ L P P S S++ + APGS+ P+A A RR +R
Sbjct: 192 RLQCMLVRVVLSLTPSFPEP------SALSDPSRWSPVLAPGSLCPAAPGAQDPRR-GKR 244
Query: 130 SPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGL 182
+PRP R R A A P + G P S A L + GL
Sbjct: 245 APRPPLRRRRLPAAASAPAPVPRPSQPRRPGTPEAVASRAVAGLSPALPPGGL 297
>gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
Length = 166
Score = 31.2 bits (69), Expect = 0.93
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 58 RTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
RT P+ S P + P L P L P L + S+ P AP
Sbjct: 35 RTMPSRCHCHSPILP--NPPSLPPSLPTLIPPPFLLWGRFSHSHSQTP--------APRI 84
Query: 118 ACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGVLVGCPSPALSARD 170
G R R R P P+ GRG+A CLP G+S V V PA +AR+
Sbjct: 85 WAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPVRV----PAAAARE 133
>gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
Length = 166
Score = 31.2 bits (69), Expect = 0.93
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 58 RTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 117
RT P+ S P + P L P L P L + S+ P AP
Sbjct: 35 RTMPSRCHCHSPILP--NPPSLPPSLPTLIPPPFLLWGRFSHSHSQTP--------APRI 84
Query: 118 ACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGVLVGCPSPALSARD 170
G R R R P P+ GRG+A CLP G+S V V PA +AR+
Sbjct: 85 WAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPVRV----PAAAARE 133
>gi|38198663 potassium channel tetramerisation domain containing 8
[Homo sapiens]
Length = 473
Score = 31.2 bits (69), Expect = 0.93
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 56 GSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLH--SLKYQSSKYPRLAAPGSV 113
GS P + +SS+SP A C P P P + L+ Y + L+ P S
Sbjct: 10 GSTILPISEMVSSSSSPGASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDST 69
Query: 114 -----APSAACAGHRRRLTRRSPRPRKSRGR 139
+PS+ G R RR PR SR R
Sbjct: 70 LASMFSPSSPRGGAR----RRGELPRDSRAR 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,002,861
Number of Sequences: 37866
Number of extensions: 564621
Number of successful extensions: 2575
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 2499
Number of HSP's gapped (non-prelim): 186
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.