LOC644006 7129

Name: LOC644006	Sequence: fasta or formatted (190aa)		NCBI GI: 169160953
Description: PREDICTED: hypothetical LOC644006		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [74aa] PREDICTED: hypothetical protein LOC644006 alt prot [190aa] PREDICTED: hypothetical protein LOC644006
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 9 1 C cysteine 4.2 8 1 D aspartate 7.4 14 2 E glutamate 6.8 13 1 F phenylalanine 0.5 1 1 G glycine 4.2 8 2 H histidine 3.7 7 1 I isoleucine 5.8 11 1 K lysine 3.7 7 2 L leucine 6.3 12 2 M methionine 1.6 3 1 N asparagine 4.2 8 1 P proline 4.2 8 1 Q glutamine 3.2 6 1 R arginine 12.1 23 3 S serine 9.5 18 2 T threonine 8.4 16 2 V valine 7.9 15 3 W tryptophan 0.0 0 0 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical LOC644006 LOC100290804 0.994 PREDICTED: hypothetical protein XP_002347917 LOC644006 0.989 PREDICTED: hypothetical protein LOC644006 RNF4 0.931 ring finger protein 4 RING1 0.061 ring finger protein 1 LONRF2 0.061 LON peptidase N-terminal domain and ring finger 2 [... RNF2 0.058 ring finger protein 2 RFWD2 0.058 ring finger and WD repeat domain 2 isoform a RFWD2 0.058 ring finger and WD repeat domain 2 isoform d24 [Homo... PHRF1 0.058 PHD and ring finger domains 1 RNF114 0.058 zinc finger protein 313 TRIM21 0.053 tripartite motif protein 21 RNF8 0.053 ring finger protein 8 isoform 1 RNF125 0.050 ring finger protein 125 TRIM40 0.050 tripartite motif-containing 40 TOPORS 0.047 topoisomerase I binding, arginine/serine-rich RNF115 0.047 Rabring 7 RNF166 0.047 ring finger protein 166 LONRF1 0.044 LON peptidase N-terminal domain and ring finger 1 [H... TRIM32 0.042 tripartite motif-containing 32 TRIM32 0.042 tripartite motif-containing 32 PCGF3 0.042 ring finger protein 3 LNX2 0.042 ligand of numb-protein X 2 LOC646862 0.042 PREDICTED: hypothetical protein LOC646862 LOC646862 0.042 PREDICTED: hypothetical protein LOC646862 LOC646862 0.042 PREDICTED: hypothetical protein LOC646862 AMFR 0.042 autocrine motility factor receptor TRIML1 0.042 tripartite motif family-like 1 RNF151 0.042 ring finger protein 151 TRIM75 0.042 tripartite motif-containing 75 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.