LOC644006 36717

Name: LOC644006	Sequence: fasta or formatted (190aa)		NCBI GI: 88943822
Description: PREDICTED: hypothetical protein LOC644006		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [190aa] PREDICTED: hypothetical LOC644006 alt prot [74aa] PREDICTED: hypothetical protein LOC644006
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 9 1 C cysteine 4.7 9 1 D aspartate 7.4 14 2 E glutamate 6.8 13 1 F phenylalanine 0.5 1 1 G glycine 4.2 8 2 H histidine 3.7 7 1 I isoleucine 6.3 12 1 K lysine 3.7 7 2 L leucine 6.3 12 2 M methionine 1.6 3 1 N asparagine 4.2 8 1 P proline 4.2 8 1 Q glutamine 3.2 6 1 R arginine 12.1 23 3 S serine 8.9 17 2 T threonine 7.9 15 2 V valine 7.9 15 3 W tryptophan 0.0 0 0 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC644006 LOC100290804 0.994 PREDICTED: hypothetical protein XP_002347917 LOC644006 0.986 PREDICTED: hypothetical LOC644006 RNF4 0.931 ring finger protein 4 RING1 0.061 ring finger protein 1 RNF2 0.058 ring finger protein 2 RFWD2 0.058 ring finger and WD repeat domain 2 isoform a RFWD2 0.058 ring finger and WD repeat domain 2 isoform d24 [Homo... RNF114 0.058 zinc finger protein 313 LONRF2 0.055 LON peptidase N-terminal domain and ring finger 2 [... TRIM21 0.052 tripartite motif protein 21 RNF8 0.052 ring finger protein 8 isoform 1 PHRF1 0.050 PHD and ring finger domains 1 RNF115 0.050 Rabring 7 RNF125 0.050 ring finger protein 125 TRIM40 0.050 tripartite motif-containing 40 TOPORS 0.047 topoisomerase I binding, arginine/serine-rich LONRF1 0.044 LON peptidase N-terminal domain and ring finger 1 [H... TRIM32 0.041 tripartite motif-containing 32 TRIM32 0.041 tripartite motif-containing 32 PCGF3 0.041 ring finger protein 3 RNF166 0.041 ring finger protein 166 LNX2 0.041 ligand of numb-protein X 2 LOC646862 0.041 PREDICTED: hypothetical protein LOC646862 LOC646862 0.041 PREDICTED: hypothetical protein LOC646862 LOC646862 0.041 PREDICTED: hypothetical protein LOC646862 AMFR 0.041 autocrine motility factor receptor TRIML1 0.041 tripartite motif family-like 1 RNF151 0.041 ring finger protein 151 PEX10 0.039 peroxisome biogenesis factor 10 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.