Search of human proteins with 169160905

Search of human proteins with 169160905

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169160905 PREDICTED: similar to nuclear transport factor 2
[Homo sapiens]
         (340 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169160905 PREDICTED: similar to nuclear transport factor 2 [H...   704   0.0  
gi|88952306 PREDICTED: similar to nuclear transport factor 2 [Ho...   264   7e-71
gi|17451119 PREDICTED: similar to nuclear transport factor 2 [Ho...   262   4e-70
gi|5031985 nuclear transport factor 2 [Homo sapiens]                  228   8e-60
gi|7019471 NTF2-like export factor 1 [Homo sapiens]                    38   0.011
gi|21361724 nuclear transport factor 2-like export factor 2 [Hom...    38   0.015
gi|19923399 Ras-GTPase activating protein SH3 domain-binding pro...    36   0.056
gi|45359849 Ras-GTPase activating protein SH3 domain-binding pro...    36   0.056
gi|45359846 Ras-GTPase activating protein SH3 domain-binding pro...    36   0.056
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    35   0.13 
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    35   0.13 
gi|54792090 hypothetical protein LOC23351 [Homo sapiens]               33   0.28 
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot...    33   0.37 
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro...    33   0.37 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            32   0.82 
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            32   0.82 
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    32   0.82 
gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]    32   1.1  
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]     31   1.4  
gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...    31   1.4  
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...    31   1.4  
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...    31   1.4  
gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B...    31   1.8  
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            31   1.8  
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            31   1.8  
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]            31   1.8  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         31   1.8  
gi|158508476 mbt domain containing 1 [Homo sapiens]                    31   1.8  
gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]            30   2.4  

>gi|169160905 PREDICTED: similar to nuclear transport factor 2 [Homo
           sapiens]
          Length = 340

 Score =  704 bits (1816), Expect = 0.0
 Identities = 340/340 (100%), Positives = 340/340 (100%)

Query: 1   MSSDGFFSEGRKADAEKVTRLDSRDQSGQLWDSQSSQRRWSKNQEQRERLPSSIPLLSCI 60
           MSSDGFFSEGRKADAEKVTRLDSRDQSGQLWDSQSSQRRWSKNQEQRERLPSSIPLLSCI
Sbjct: 1   MSSDGFFSEGRKADAEKVTRLDSRDQSGQLWDSQSSQRRWSKNQEQRERLPSSIPLLSCI 60

Query: 61  DQGPSGPGGGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGD 120
           DQGPSGPGGGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGD
Sbjct: 61  DQGPSGPGGGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGD 120

Query: 121 RGVRWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRVGAAFGVLRE 180
           RGVRWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRVGAAFGVLRE
Sbjct: 121 RGVRWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRVGAAFGVLRE 180

Query: 181 QVRRTCLESVVWTSGLWVRSNPSRQDCNRGGLQLTGDKPVWEPIGSSFNQHYYQLFDNDR 240
           QVRRTCLESVVWTSGLWVRSNPSRQDCNRGGLQLTGDKPVWEPIGSSFNQHYYQLFDNDR
Sbjct: 181 QVRRTCLESVVWTSGLWVRSNPSRQDCNRGGLQLTGDKPVWEPIGSSFNQHYYQLFDNDR 240

Query: 241 TQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVV 300
           TQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVV
Sbjct: 241 TQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVV 300

Query: 301 GQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFALHNFG 340
           GQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFALHNFG
Sbjct: 301 GQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFALHNFG 340


>gi|88952306 PREDICTED: similar to nuclear transport factor 2 [Homo
           sapiens]
          Length = 126

 Score =  264 bits (675), Expect = 7e-71
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 216 GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 275
           GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF
Sbjct: 2   GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 61

Query: 276 QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA 335
           QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA
Sbjct: 62  QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA 121

Query: 336 LHNFG 340
           LHNFG
Sbjct: 122 LHNFG 126


>gi|17451119 PREDICTED: similar to nuclear transport factor 2 [Homo
           sapiens]
          Length = 126

 Score =  262 bits (669), Expect = 4e-70
 Identities = 124/125 (99%), Positives = 124/125 (99%)

Query: 216 GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 275
           GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF
Sbjct: 2   GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 61

Query: 276 QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA 335
           QKIQNSL AQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA
Sbjct: 62  QKIQNSLTAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGFCANDMFRFA 121

Query: 336 LHNFG 340
           LHNFG
Sbjct: 122 LHNFG 126


>gi|5031985 nuclear transport factor 2 [Homo sapiens]
          Length = 127

 Score =  228 bits (580), Expect = 8e-60
 Identities = 109/126 (86%), Positives = 115/126 (91%), Gaps = 1/126 (0%)

Query: 216 GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 275
           GDKP+WE IGSSF QHYYQLFDNDRTQLGAIYIDASCLTWE +QFQGKAA VEKLSSLPF
Sbjct: 2   GDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPF 61

Query: 276 QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGF-CANDMFRF 334
           QKIQ+S+ AQDHQPTPDSCII +VVGQLKADEDPI GFHQMFLLKNIND + C NDMFR 
Sbjct: 62  QKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121

Query: 335 ALHNFG 340
           ALHNFG
Sbjct: 122 ALHNFG 127


>gi|7019471 NTF2-like export factor 1 [Homo sapiens]
          Length = 140

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 232 YYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPFQKIQNSLRAQDHQPTP 291
           YY   D  R  L  +Y+  + L W      G+ +  E    LP  + Q S+   D QP  
Sbjct: 24  YYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSEFQISV--VDCQPVH 81

Query: 292 D------SCIIGVVVGQLKADEDPIKGFHQMFLL 319
           D      + ++ V+ G +K + +  + F+Q F+L
Sbjct: 82  DEATPSQTTVLVVICGSVKFEGNKQRDFNQNFIL 115


>gi|21361724 nuclear transport factor 2-like export factor 2 [Homo
           sapiens]
          Length = 197

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 9/112 (8%)

Query: 232 YYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPFQKIQ-NSLRAQD-HQP 289
           YY+  D  R  L  +Y+D + L W      G  A      +LP  + Q N L  Q  H+ 
Sbjct: 80  YYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLPSSEFQVNMLDCQPVHEQ 139

Query: 290 TPDS--CIIGVVVGQLKADEDPIKGFHQMFLL-----KNINDGFCANDMFRF 334
              S   ++ V  G +K D +    F+Q FLL      N      A+D FRF
Sbjct: 140 ATQSQTTVLVVTSGTVKFDGNKQHFFNQNFLLTAQSTPNNTVWKIASDCFRF 191


>gi|19923399 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform a [Homo sapiens]
          Length = 482

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 217 DKPVWEPIGSSFNQHYYQLFDNDRTQLGAIY----------IDASCLTWEVRQFQGKAAA 266
           +KP    +G  F + YY L +     L   Y          +DAS    E     G+   
Sbjct: 4   EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEA--VYGQNDI 61

Query: 267 VEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLL----KNI 322
             K+ SL F +    +R  D   T    ++  V+G L     P + F Q F+L       
Sbjct: 62  HHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVP 121

Query: 323 NDGFCANDMFRFALHNFG 340
           N  +  NDMFR+    FG
Sbjct: 122 NKFYVHNDMFRYEDEVFG 139


>gi|45359849 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform a [Homo sapiens]
          Length = 482

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 217 DKPVWEPIGSSFNQHYYQLFDNDRTQLGAIY----------IDASCLTWEVRQFQGKAAA 266
           +KP    +G  F + YY L +     L   Y          +DAS    E     G+   
Sbjct: 4   EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEA--VYGQNDI 61

Query: 267 VEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLL----KNI 322
             K+ SL F +    +R  D   T    ++  V+G L     P + F Q F+L       
Sbjct: 62  HHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVP 121

Query: 323 NDGFCANDMFRFALHNFG 340
           N  +  NDMFR+    FG
Sbjct: 122 NKFYVHNDMFRYEDEVFG 139


>gi|45359846 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform b [Homo sapiens]
          Length = 449

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 217 DKPVWEPIGSSFNQHYYQLFDNDRTQLGAIY----------IDASCLTWEVRQFQGKAAA 266
           +KP    +G  F + YY L +     L   Y          +DAS    E     G+   
Sbjct: 4   EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEA--VYGQNDI 61

Query: 267 VEKLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLL----KNI 322
             K+ SL F +    +R  D   T    ++  V+G L     P + F Q F+L       
Sbjct: 62  HHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVP 121

Query: 323 NDGFCANDMFRFALHNFG 340
           N  +  NDMFR+    FG
Sbjct: 122 NKFYVHNDMFRYEDEVFG 139


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 137 GSVPRPGGPRWPASIVSVPPTPINAGSRCGG 167
           GS P PGGPR P+   + PP P N G+  GG
Sbjct: 202 GSPPVPGGPRQPSPGPTPPPFPGNRGTALGG 232


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 137 GSVPRPGGPRWPASIVSVPPTPINAGSRCGG 167
           GS P PGGPR P+   + PP P N G+  GG
Sbjct: 202 GSPPVPGGPRQPSPGPTPPPFPGNRGTALGG 232


>gi|54792090 hypothetical protein LOC23351 [Homo sapiens]
          Length = 678

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 16/106 (15%)

Query: 43  NQEQRERLPSSIP--LLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAGAGCVSKRASV 100
           ++E   +LP ++   LLS + +  SG G G   +W   S +L       GA C   RA  
Sbjct: 175 HREALLQLPLAVQEELLSLVQEASSGQGPGALASWEGRSSAL------LGAQCQGVRAPP 228

Query: 101 SKRASSLSWAVSTKCASVGDRGVRWGLGGSWAIPSTGSVPRPGGPR 146
           S    SL         S+G    R   G ++A+   G   + GGPR
Sbjct: 229 SDGRESLD------TGSMGPGDCRGARGDTYAVEKEGG--KQGGPR 266


>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
           [Homo sapiens]
          Length = 466

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 217 DKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAV--------E 268
           +KP    +G  F + YY L +     L   Y   S          GK A           
Sbjct: 4   EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHR 63

Query: 269 KLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLL----KNIND 324
           K+ S  F      +R  D   T +  ++  V+G L  +   ++ F Q F+L       N 
Sbjct: 64  KVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANK 123

Query: 325 GFCANDMFRFALHNFG 340
            +  ND+FR+    FG
Sbjct: 124 FYVHNDIFRYQDEVFG 139


>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
           protein [Homo sapiens]
          Length = 466

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 217 DKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAV--------E 268
           +KP    +G  F + YY L +     L   Y   S          GK A           
Sbjct: 4   EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHR 63

Query: 269 KLSSLPFQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLL----KNIND 324
           K+ S  F      +R  D   T +  ++  V+G L  +   ++ F Q F+L       N 
Sbjct: 64  KVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANK 123

Query: 325 GFCANDMFRFALHNFG 340
            +  ND+FR+    FG
Sbjct: 124 FYVHNDIFRYQDEVFG 139


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 42/134 (31%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 51  PSSIPLLSCIDQGPSGPGGGI-----GRAWASPSRSLRVRRRFAGAGCVSKRASVSKRAS 105
           P+  P  S   Q   G GG +       AW  P+R+ R   R AG      RA    RA+
Sbjct: 55  PTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAA 114

Query: 106 SLSWAVSTKCASVGDRGVRWGLGGSWAIPSTG--SVPRPGGPRWPASIVSVPP---TPIN 160
           +   + +   A     GV    GG+ A  S G  SVP    P         PP   T + 
Sbjct: 115 ATRRSPAPGTARGSPAGVE-RAGGATAASSAGTRSVPARRLP---------PPCGGTSLG 164

Query: 161 AGSRCGGFRRVGAA 174
           AGSR    RR G+A
Sbjct: 165 AGSR--ALRRPGSA 176


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 8/122 (6%)

Query: 31  WDSQSSQRRWSKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAG 90
           + +Q+  RR S +     RL        C   G  GPGGG        + +  +  R A 
Sbjct: 127 FSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAA 186

Query: 91  AGCVSKRASVSKRASSLSWAVSTK--CASVGDRGVRWGLGGSWAIPSTGSVPRP-GGPRW 147
            G  S+ A V+ R ++L+ A   +    +   RG+R  LG           PRP G PR 
Sbjct: 187 GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGA-----GERPAPRPRGPPRA 241

Query: 148 PA 149
           PA
Sbjct: 242 PA 243



 Score = 28.5 bits (62), Expect = 9.0
 Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 64  PSGPG--GGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGDR 121
           P+GPG    + R + S S S + R R   A  +       +RAS         C+S G R
Sbjct: 109 PAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASP-------GCSSPGVR 161

Query: 122 GVRWGLG----GSWAIPSTGSVPRPGGPRWPASIVS----------VPPTPINAGSRCGG 167
           G   G      G  A  +  +    GG R  ++ V+          +P  P  AG+R G 
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221

Query: 168 FRRVGA 173
            RR+GA
Sbjct: 222 RRRLGA 227


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 8/122 (6%)

Query: 31  WDSQSSQRRWSKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAG 90
           + +Q+  RR S +     RL        C   G  GPGGG        + +  +  R A 
Sbjct: 127 FSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAA 186

Query: 91  AGCVSKRASVSKRASSLSWAVSTK--CASVGDRGVRWGLGGSWAIPSTGSVPRP-GGPRW 147
            G  S+ A V+ R ++L+ A   +    +   RG+R  LG           PRP G PR 
Sbjct: 187 GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGA-----GERPAPRPRGPPRA 241

Query: 148 PA 149
           PA
Sbjct: 242 PA 243



 Score = 28.5 bits (62), Expect = 9.0
 Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 64  PSGPG--GGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGDR 121
           P+GPG    + R + S S S + R R   A  +       +RAS         C+S G R
Sbjct: 109 PAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASP-------GCSSPGVR 161

Query: 122 GVRWGLG----GSWAIPSTGSVPRPGGPRWPASIVS----------VPPTPINAGSRCGG 167
           G   G      G  A  +  +    GG R  ++ V+          +P  P  AG+R G 
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221

Query: 168 FRRVGA 173
            RR+GA
Sbjct: 222 RRRLGA 227


>gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]
          Length = 1090

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 133 IPSTGSVPRPGGPRWPASIVSVPPTP 158
           +P+TGS P+PG  +     +SVPP+P
Sbjct: 503 LPATGSTPQPGSSQQIQQRISVPPSP 528


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 35/135 (25%), Positives = 43/135 (31%), Gaps = 33/135 (24%)

Query: 31  WDSQSSQRRWSKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAG 90
           W S  S   W+          SS    SCI    SG        WASPS           
Sbjct: 207 WASSPSDFGWASTPSDSGWASSSA---SCISPSASGASTSSDSGWASPS----------- 252

Query: 91  AGCVSKRASVSKRASSLSWAVSTKC--ASVGDRGVRWGLGGSWAIPSTGSVPRPGGPRWP 148
           A  VS   S +  +S   WA S+    +   D G        W  PS           W 
Sbjct: 253 ASWVSTSTSRASTSSDSGWASSSASWDSITSDSG--------WVCPSAS---------WA 295

Query: 149 ASIVSVPPTPINAGS 163
           +S  S    P ++GS
Sbjct: 296 SSSASWASAPSDSGS 310



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/60 (30%), Positives = 22/60 (36%)

Query: 103 RASSLSWAVSTKCASVGDRGVRWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAG 162
           RAS +S    +  AS    G        WA PS      P    W +   S   TP N+G
Sbjct: 8   RASGVSTPSGSGWASSSASGASTPSNSGWASPSASGASIPSDSGWASPSASGASTPSNSG 67



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 50/179 (27%), Positives = 58/179 (32%), Gaps = 41/179 (22%)

Query: 27  SGQLWDSQSSQRRW---SKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRA-------WA 76
           S   WDS +S   W   S +        +S P     D G S P   + RA       WA
Sbjct: 274 SSASWDSITSDSGWVCPSASWASSSASWASAPS----DSGSSSPS--VSRASTLSVSGWA 327

Query: 77  SPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWAVSTKCASVGDRGVRWGLGGSWAIPST 136
           S S S        GA   S     S  AS +S    +  AS    G        WA PS 
Sbjct: 328 SFSAS--------GASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASPSA 379

Query: 137 ---------GSVPRPGGPRWP-ASIVSVPPTPINAGSRC-------GGFRRVGAAFGVL 178
                     S P   G   P AS  S+P  P      C        GF  VG  F +L
Sbjct: 380 SWASPSASGASTPSDSGWASPSASGASMPSAPSLCPGSCFPQLTARTGFTVVGFPFSLL 438



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 30/112 (26%), Positives = 35/112 (31%), Gaps = 11/112 (9%)

Query: 51  PSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAGAGCVSKRASVSKRASSLSWA 110
           PS     S    G S P       WASPS S        GA   S     S  AS  S  
Sbjct: 15  PSGSGWASSSASGASTPSNS---GWASPSAS--------GASIPSDSGWASPSASGASTP 63

Query: 111 VSTKCASVGDRGVRWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAG 162
            ++  AS             WA PS      P    W +   S    P ++G
Sbjct: 64  SNSGWASFSASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSDSG 115



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 30/119 (25%), Positives = 33/119 (27%), Gaps = 26/119 (21%)

Query: 31  WDSQSSQRRWSKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVRRRFAG 90
           W S SS   W+           + P  SC     SG        WASPS           
Sbjct: 154 WASTSSDSGWASPSASW-----TSPSASCASSSASGASTPSDSGWASPS----------- 197

Query: 91  AGCVSKRASVSKRASSLSWA----------VSTKCASVGDRGVRWGLGGSWAIPSTGSV 139
              VS   S +   S   WA           S  C S    G        WA PS   V
Sbjct: 198 VFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSSDSGWASPSASWV 256


>gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]
          Length = 394

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 10/45 (22%)

Query: 45  EQRERLPSSIPLL---------SCIDQGPSGPGGGIGRAWASPSR 80
           + RE+L  SIP++         +C++Q  S PGGG GR   +PSR
Sbjct: 316 KSREKLQYSIPMIIPRDLSTSDTCVEQSHSSPGGG-GRYSDTPSR 359


>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 44  QEQRERLPSSIPLLSCIDQGPS-------GPGGGIGRAWASPSRSLRVRRRFAGAGCVSK 96
           Q +R  L   +P  + I    S       GPG   GR W S  RS + R+R     C   
Sbjct: 109 QRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGR-WVSLHRSQQERKRVMQEACAKY 167

Query: 97  RASVSKRA 104
           RAS S+RA
Sbjct: 168 RASSSRRA 175


>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 44  QEQRERLPSSIPLLSCIDQGPS-------GPGGGIGRAWASPSRSLRVRRRFAGAGCVSK 96
           Q +R  L   +P  + I    S       GPG   GR W S  RS + R+R     C   
Sbjct: 109 QRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGR-WVSLHRSQQERKRVMQEACAKY 167

Query: 97  RASVSKRA 104
           RAS S+RA
Sbjct: 168 RASSSRRA 175


>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 44  QEQRERLPSSIPLLSCIDQGPS-------GPGGGIGRAWASPSRSLRVRRRFAGAGCVSK 96
           Q +R  L   +P  + I    S       GPG   GR W S  RS + R+R     C   
Sbjct: 109 QRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGR-WVSLHRSQQERKRVMQEACAKY 167

Query: 97  RASVSKRA 104
           RAS S+RA
Sbjct: 168 RASSSRRA 175


>gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B,
           member 2 isoform 1 [Homo sapiens]
          Length = 598

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 134 PSTGSVPRPGGP-RWPASIVSVPPTPINAGSRCGGFRRVGAAFGVL 178
           PS GS P P GP   PA     P TP  +  + G  R +G   G+L
Sbjct: 421 PSMGSSPPPTGPISTPAGPEDQPLTPTGSDPQSGLGRHLGVVIGIL 466


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 127 LGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRV 171
           LGG W  P     PR  GP   ++  S PP+P+    R G + RV
Sbjct: 11  LGGQWGTPL---YPRARGPAIASAGYSRPPSPVGRARRRGTWLRV 52


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 127 LGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRV 171
           LGG W  P     PR  GP   ++  S PP+P+    R G + RV
Sbjct: 11  LGGQWGTPL---YPRARGPAIASAGYSRPPSPVGRARRRGTWLRV 52


>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 127 LGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINAGSRCGGFRRV 171
           LGG W  P     PR  GP   ++  S PP+P+    R G + RV
Sbjct: 11  LGGQWGTPL---YPRARGPAIASAGYSRPPSPVGRARRRGTWLRV 52


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 12   KADAEKVTRLDSRDQSGQLWDSQSSQRRWSKNQEQRERLPSSIPL-LSCIDQGPSGPGGG 70
            +A  E+V+R + +    Q+   +++++   + +E+  RLP          D+   G GGG
Sbjct: 2321 EASLEEVSREELKQAEEQV---EAARKDLDQAKEEVFRLPQEEEEGPGAGDESSCGTGGG 2377

Query: 71   IGR----AWASPSRSLRVRRRFAGAGCVSKRAS---VSKRASSLSWAVSTKCASVGDRGV 123
              R    A A      RV  R  GA   ++ A+   V     + S     +C+   +R  
Sbjct: 2378 THRRSKKAKAPERPGTRVSERLRGARAETQGANHTPVISAHQTRSTTTPPRCSPARER-- 2435

Query: 124  RWGLGGSWAIPSTGSVPRPGGPRWPASIVSVPPTPINA 161
                     +P     PRP     PA+I ++ P P++A
Sbjct: 2436 ---------VPRPAPRPRPTPASAPAAIPALVPVPVSA 2464


>gi|158508476 mbt domain containing 1 [Homo sapiens]
          Length = 628

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 32  DSQSSQRRWSKNQEQRERLPSSIPLLSCIDQGPSGPGGGIGRAWASPSRSLRVR------ 85
           +  SS     +++E+   LPS++P++    Q  + P G  G A       + VR      
Sbjct: 10  EDTSSSSSSEESEEEVAPLPSNLPIIKNNGQVYTYPDGKSGMATCEMCGMVGVRDAFYSK 69

Query: 86  -RRFAGAGCVSKRASVSKRASSLS 108
            +RF    C    +S SK+AS L+
Sbjct: 70  TKRFCSVSCSRSYSSNSKKASILA 93


>gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 527

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 145 PRWPASIVSVPPTP---INAGSRCGGFRRVGAAFGVLREQVRRTCLESVVWTSGLWVRSN 201
           P+ PA ++  PP+P   +  GS C   +++G  F +     R    +S VW S    R++
Sbjct: 408 PKDPAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRAS 467

Query: 202 PSRQDCNRGGLQLTG 216
            S Q      L  TG
Sbjct: 468 HSAQLPRSSSLASTG 482


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,108,807
Number of Sequences: 37866
Number of extensions: 768039
Number of successful extensions: 2884
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 2825
Number of HSP's gapped (non-prelim): 94
length of query: 340
length of database: 18,247,518
effective HSP length: 103
effective length of query: 237
effective length of database: 14,347,320
effective search space: 3400314840
effective search space used: 3400314840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.