Guide to the Human Genome
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Name: ANKLE1 Sequence: fasta or formatted (615aa) NCBI GI: 168229256
Description:

ankyrin repeat domain 41

Referenced in:

Ankyrin Family
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         68           3
 C cysteine            2.4         15           1
 D aspartate           5.5         34           1
 E glutamate           6.7         41           3
 F phenylalanine       1.8         11           1
 G glycine             8.0         49           2
 H histidine           4.1         25           2
 I isoleucine          2.3         14           1
 K lysine              1.3          8           1
 L leucine            12.2         75           3
 M methionine          0.5          3           1
 N asparagine          1.3          8           1
 P proline             8.9         55           2
 Q glutamine           5.7         35           2
 R arginine            8.6         53           4
 S serine              6.0         37           2
 T threonine           5.5         34           1
 V valine              5.4         33           2
 W tryptophan          1.6         10           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 41 
ANK1                  0.034   ankyrin 1 isoform 9 
ANK1                  0.034   ankyrin 1 isoform 1 
ANK1                  0.034   ankyrin 1 isoform 3 
ANK1                  0.034   ankyrin 1 isoform 2 
ANK1                  0.034   ankyrin 1 isoform 4 
ANK2                  0.032   ankyrin 2 isoform 3 
ANK2                  0.032   ankyrin 2 isoform 2 
ANK2                  0.032   ankyrin 2 isoform 1 
ANK3                  0.032   ankyrin 3 isoform 1 
NOTCH3                0.031   Notch homolog 3 
ESPNL                 0.031   espin-like 
TNNI3K                0.030   TNNI3 interacting kinase isoform b 
TNNI3K                0.030   TNNI3 interacting kinase isoform a 
NOTCH4                0.030   notch4 preproprotein 
ANKRD44               0.030   ankyrin repeat domain 44 
ANKRD35               0.029   ankyrin repeat domain 35 
ANKRD54               0.029   ankyrin repeat domain 54 
ANKK1                 0.029   ankyrin repeat and kinase domain containing 1 
ANKRD28               0.029   ankyrin repeat domain 28 
ASB10                 0.028   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB10                 0.028   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.028   ankyrin repeat and SOCS box-containing 10 isoform 3...
PPP1R12C              0.027   protein phosphatase 1, regulatory subunit 12C 
ESPN                  0.027   espin 
ANKRD10               0.026   ankyrin repeat domain 10 
TNKS                  0.026   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
USH1G                 0.026   Usher syndrome 1G protein 
ASB16                 0.024   ankyrin repeat and SOCS box-containing protein 16 [H...
TNKS2                 0.024   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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