Guide to the Human Genome
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Name: NOL3 Sequence: fasta or formatted (208aa) NCBI GI: 4505419
Description:

nucleolar protein 3

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         22           2
 C cysteine            1.9          4           1
 D aspartate           7.2         15           1
 E glutamate          18.8         39           2
 F phenylalanine       0.5          1           1
 G glycine             8.2         17           2
 H histidine           1.0          2           1
 I isoleucine          0.5          1           1
 K lysine              1.4          3           1
 L leucine             9.6         20           4
 M methionine          0.5          1           1
 N asparagine          0.5          1           1
 P proline            14.4         30           2
 Q glutamine           3.4          7           1
 R arginine            7.2         15           2
 S serine              4.8         10           1
 T threonine           3.8          8           2
 V valine              2.9          6           1
 W tryptophan          1.4          3           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 3 
CARD6                 0.127   caspase recruitment domain family, member 6 
SLC16A2               0.090   solute carrier family 16, member 2 
DGKK                  0.080   diacylglycerol kinase kappa 
TRIM44                0.078   DIPB protein 
RYR1                  0.078   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.078   skeletal muscle ryanodine receptor isoform 1 
RP1L1                 0.073   retinitis pigmentosa 1-like 1 
SLC26A8               0.063   solute carrier family 26, member 8 isoform a 
SLC26A8               0.063   solute carrier family 26, member 8 isoform b 
PDGFRB                0.061   platelet-derived growth factor receptor beta precurso...
PRRT2                 0.061   proline-rich transmembrane protein 2 
PPM1E                 0.058   protein phosphatase 1E 
VSIG1                 0.058   V-set and immunoglobulin domain containing 1 
BASP1                 0.056   brain abundant, membrane attached signal protein 1 [...
OGFR                  0.056   opioid growth factor receptor 
HCLS1                 0.056   hematopoietic cell-specific Lyn substrate 1 
ZNF219                0.051   zinc finger protein 219 
ZNF219                0.051   zinc finger protein 219 
ZNF219                0.051   zinc finger protein 219 
ACAN                  0.051   aggrecan isoform 2 precursor 
ACAN                  0.051   aggrecan isoform 1 precursor 
CCNB1                 0.051   cyclin B1 
PHLDA1                0.051   pleckstrin homology-like domain, family A, member 1 ...
SULT2B1               0.049   sulfotransferase family, cytosolic, 2B, member 1 iso...
SULT2B1               0.049   sulfotransferase family, cytosolic, 2B, member 1 iso...
ZNF358                0.049   zinc finger protein 358 
PRDM2                 0.049   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.049   retinoblastoma protein-binding zinc finger protein i...
CLIC6                 0.049   chloride intracellular channel 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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