Guide to the Human Genome
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Name: PLD3 Sequence: fasta or formatted (490aa) NCBI GI: 166197683
Description:

phospholipase D3

Referenced in:

Acetylcholine
Lipid Metabolism

Other entries for this name:
alt mRNA [490aa] phospholipase D3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         46           2
 C cysteine            1.6          8           1
 D aspartate           4.7         23           2
 E glutamate           5.1         25           2
 F phenylalanine       3.5         17           1
 G glycine             5.9         29           2
 H histidine           2.7         13           1
 I isoleucine          3.1         15           1
 K lysine              3.3         16           2
 L leucine            11.8         58           2
 M methionine          2.4         12           1
 N asparagine          4.5         22           2
 P proline             6.5         32           3
 Q glutamine           4.7         23           2
 R arginine            5.1         25           2
 S serine              6.9         34           2
 T threonine           5.9         29           1
 V valine              6.5         32           2
 W tryptophan          2.7         13           1
 Y tyrosine            3.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase D3 
PLD3                  1.000   phospholipase D3 
PLD4                  0.383   phospholipase D4 
PLD5                  0.256   phospholipase D5 
GALNS                 0.014   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
NR2C2                 0.013   nuclear receptor subfamily 2, group C, member 2 [Hom...
GBA                   0.010   glucocerebrosidase precursor 
GBA                   0.010   glucocerebrosidase precursor 
GBA                   0.010   glucocerebrosidase precursor 
GBA                   0.010   glucocerebrosidase precursor 
GBA                   0.010   glucocerebrosidase precursor 
LOC100287807          0.008   PREDICTED: hypothetical protein 
PLD6                  0.008   phospholipase D6 
NFYC                  0.006   nuclear transcription factor Y, gamma isoform 5 [Ho...
MUM1                  0.006   melanoma ubiquitous mutated protein 
RTN4RL1               0.006   reticulon 4 receptor-like 1 
NCOA1                 0.006   nuclear receptor coactivator 1 isoform 2 
NCOA1                 0.006   nuclear receptor coactivator 1 isoform 3 
NCOA1                 0.006   nuclear receptor coactivator 1 isoform 1 
CTSF                  0.006   cathepsin F 
LGALS9                0.005   galectin-9 isoform short 
KDM6A                 0.005   ubiquitously transcribed tetratricopeptide repeat, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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