Guide to the Human Genome
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Name: PLD5 Sequence: fasta or formatted (444aa) NCBI GI: 22749353
Description:

phospholipase D5

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         27           2
 C cysteine            1.8          8           1
 D aspartate           6.1         27           2
 E glutamate           3.8         17           1
 F phenylalanine       4.5         20           2
 G glycine             4.1         18           2
 H histidine           1.4          6           1
 I isoleucine          5.4         24           2
 K lysine              9.0         40           2
 L leucine            10.6         47           3
 M methionine          2.0          9           1
 N asparagine          6.8         30           2
 P proline             3.4         15           1
 Q glutamine           5.0         22           1
 R arginine            4.5         20           1
 S serine              8.3         37           2
 T threonine           5.2         23           1
 V valine              6.3         28           1
 W tryptophan          2.0          9           1
 Y tyrosine            3.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase D5 
PLD3                  0.289   phospholipase D3 
PLD3                  0.289   phospholipase D3 
PLD4                  0.262   phospholipase D4 
FSCB                  0.007   fibrous sheath CABYR binding protein 
KIAA1432              0.007   connexin 43-interacting protein 150 isoform a 
DUOX1                 0.006   dual oxidase 1 precursor 
DUOX1                 0.006   dual oxidase 1 precursor 
ASMTL                 0.006   acetylserotonin O-methyltransferase-like 
ZKSCAN5               0.006   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.006   zinc finger with KRAB and SCAN domains 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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