Guide to the Human Genome
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Name: GALNS Sequence: fasta or formatted (522aa) NCBI GI: 4503899
Description:

galactosamine (N-acetyl)-6-sulfate sulfatase precursor

Referenced in:

Lysosomes and Related Organelles
Phosphatases and Sulfatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         46           2
 C cysteine            1.5          8           1
 D aspartate           4.6         24           2
 E glutamate           4.8         25           2
 F phenylalanine       4.8         25           2
 G glycine             8.8         46           2
 H histidine           3.6         19           2
 I isoleucine          3.8         20           1
 K lysine              3.3         17           2
 L leucine            11.3         59           4
 M methionine          2.1         11           1
 N asparagine          4.4         23           1
 P proline             7.9         41           2
 Q glutamine           4.6         24           2
 R arginine            4.8         25           1
 S serine              5.2         27           1
 T threonine           5.4         28           2
 V valine              4.4         23           2
 W tryptophan          2.9         15           2
 Y tyrosine            3.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galactosamine (N-acetyl)-6-sulfate sulfatase precurso... 
ARSA                  0.226   arylsulfatase A isoform a precursor 
ARSA                  0.226   arylsulfatase A isoform a precursor 
ARSA                  0.226   arylsulfatase A isoform a precursor 
ARSA                  0.226   arylsulfatase A isoform a precursor 
ARSD                  0.205   arylsulfatase D isoform a precursor 
ARSG                  0.205   Arylsulfatase G 
ARSA                  0.145   arylsulfatase A isoform b 
ARSB                  0.140   arylsulfatase B isoform 1 precursor 
ARSI                  0.139   arylsulfatase family, member I 
ARSB                  0.139   arylsulfatase B isoform 2 precursor 
ARSH                  0.122   arylsulfatase family, member H 
STS                   0.121   steryl-sulfatase precursor 
ARSF                  0.119   arylsulfatase F precursor 
ARSE                  0.114   arylsulfatase E precursor 
ARSJ                  0.114   arylsulfatase J 
ARSD                  0.098   arylsulfatase D isoform b precursor 
SGSH                  0.067   N-sulfoglucosamine sulfohydrolase precursor 
IDS                   0.053   iduronate-2-sulfatase isoform a precursor 
GNS                   0.048   glucosamine (N-acetyl)-6-sulfatase precursor 
IDS                   0.045   iduronate-2-sulfatase isoform b precursor 
SULF1                 0.040   sulfatase 1 
SULF1                 0.040   sulfatase 1 
SULF1                 0.040   sulfatase 1 
SULF1                 0.040   sulfatase 1 
SULF2                 0.037   sulfatase 2 isoform a precursor 
SULF2                 0.037   sulfatase 2 isoform b precursor 
SULF2                 0.037   sulfatase 2 isoform a precursor 
ARSK                  0.032   arylsulfatase K 
LOC727913             0.029   PREDICTED: similar to iduronate 2-sulfatase (Hunter...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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