Guide to the Human Genome
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Name: GBA Sequence: fasta or formatted (536aa) NCBI GI: 54607051
Description:

glucocerebrosidase precursor

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids
Lysosomes and Related Organelles

Other entries for this name:
alt mRNA [536aa] glucocerebrosidase precursor
alt mRNA [536aa] glucocerebrosidase precursor
alt mRNA [536aa] glucocerebrosidase precursor
alt mRNA [536aa] glucocerebrosidase precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         42           3
 C cysteine            1.5          8           1
 D aspartate           4.9         26           2
 E glutamate           3.9         21           2
 F phenylalanine       5.0         27           1
 G glycine             6.9         37           2
 H histidine           3.4         18           2
 I isoleucine          4.1         22           2
 K lysine              4.3         23           1
 L leucine            11.2         60           4
 M methionine          2.1         11           1
 N asparagine          3.5         19           1
 P proline             6.9         37           2
 Q glutamine           3.9         21           1
 R arginine            4.5         24           2
 S serine              8.2         44           2
 T threonine           6.0         32           1
 V valine              6.0         32           4
 W tryptophan          2.4         13           1
 Y tyrosine            3.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucocerebrosidase precursor 
GBA                   1.000   glucocerebrosidase precursor 
GBA                   1.000   glucocerebrosidase precursor 
GBA                   1.000   glucocerebrosidase precursor 
GBA                   1.000   glucocerebrosidase precursor 
PLD3                  0.009   phospholipase D3 
PLD3                  0.009   phospholipase D3 
ADAMTS20              0.006   a disintegrin-like and metalloprotease with thrombo...
ARHGEF10L             0.004   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.004   Rho guanine nucleotide exchange factor (GEF) 10-like...
KIRREL2               0.004   kin of IRRE-like 2 isoform c 
KIRREL2               0.004   kin of IRRE-like 2 isoform a 
CCNF                  0.004   cyclin F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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