Search of human proteins with 16554564

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16554564 caspase recruitment domain family, member 6 [Homo
sapiens]
         (1037 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16554564 caspase recruitment domain family, member 6 [Homo sa...  2095   0.0  
gi|117968347 up-regulated gene 4 isoform 1 [Homo sapiens]             221   2e-57
gi|117968328 up-regulated gene 4 isoform 3 [Homo sapiens]             221   2e-57
gi|117968345 up-regulated gene 4 isoform 2 [Homo sapiens]             219   1e-56
gi|4505419 nucleolar protein 3 [Homo sapiens]                          77   8e-14
gi|150170670 piccolo isoform 2 [Homo sapiens]                          56   2e-07
gi|150378539 piccolo isoform 1 [Homo sapiens]                          56   2e-07
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       52   4e-06
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     49   2e-05
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     49   2e-05
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]      49   2e-05
gi|38788260 bromodomain PHD finger transcription factor isoform ...    49   3e-05
gi|38788274 bromodomain PHD finger transcription factor isoform ...    49   3e-05
gi|41281612 zinc finger protein 828 [Homo sapiens]                     45   3e-04
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               45   5e-04
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]            45   5e-04
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)...    44   6e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)...    44   6e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)...    44   6e-04
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s...    44   6e-04
gi|54860079 nadrin isoform 1 [Homo sapiens]                            44   0.001
gi|54860105 nadrin isoform 2 [Homo sapiens]                            44   0.001
gi|210147567 hypothetical protein LOC220081 [Homo sapiens]             44   0.001
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             44   0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        43   0.001
gi|157785645 SPEG complex locus [Homo sapiens]                         42   0.002
gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Ho...    42   0.002
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   42   0.003
gi|189181722 proteoglycan 4 isoform C [Homo sapiens]                   42   0.003
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   42   0.003

>gi|16554564 caspase recruitment domain family, member 6 [Homo
            sapiens]
          Length = 1037

 Score = 2095 bits (5427), Expect = 0.0
 Identities = 1037/1037 (100%), Positives = 1037/1037 (100%)

Query: 1    MATESTPSEIIERERKKLLEILQHDPDSILDTLTSRRLISEEEYETLENVTDLLKKSRKL 60
            MATESTPSEIIERERKKLLEILQHDPDSILDTLTSRRLISEEEYETLENVTDLLKKSRKL
Sbjct: 1    MATESTPSEIIERERKKLLEILQHDPDSILDTLTSRRLISEEEYETLENVTDLLKKSRKL 60

Query: 61   LILVQKKGEATCQHFLKCLFSTFPQSAAICGLRHEVLKHENTVPPQSMGASSNSEDAFSP 120
            LILVQKKGEATCQHFLKCLFSTFPQSAAICGLRHEVLKHENTVPPQSMGASSNSEDAFSP
Sbjct: 61   LILVQKKGEATCQHFLKCLFSTFPQSAAICGLRHEVLKHENTVPPQSMGASSNSEDAFSP 120

Query: 121  GIKQPEAPEITVFFSEKEHLDLETSEFFRDKKTSYRETALSARKNEKEYDTPEVTLSYSV 180
            GIKQPEAPEITVFFSEKEHLDLETSEFFRDKKTSYRETALSARKNEKEYDTPEVTLSYSV
Sbjct: 121  GIKQPEAPEITVFFSEKEHLDLETSEFFRDKKTSYRETALSARKNEKEYDTPEVTLSYSV 180

Query: 181  EKVGCEVPATITYIKDGQRYEELDDSLYLGKEEYLGSVDTPEDAEATVEEEVYDDPEHVG 240
            EKVGCEVPATITYIKDGQRYEELDDSLYLGKEEYLGSVDTPEDAEATVEEEVYDDPEHVG
Sbjct: 181  EKVGCEVPATITYIKDGQRYEELDDSLYLGKEEYLGSVDTPEDAEATVEEEVYDDPEHVG 240

Query: 241  YDGEEDFENSETTEFSGEEPSYEGSETSLSLEEEQEKSIEERKKVFKDVLLCLNMDRSRK 300
            YDGEEDFENSETTEFSGEEPSYEGSETSLSLEEEQEKSIEERKKVFKDVLLCLNMDRSRK
Sbjct: 241  YDGEEDFENSETTEFSGEEPSYEGSETSLSLEEEQEKSIEERKKVFKDVLLCLNMDRSRK 300

Query: 301  VLPDFVKQFSLDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDEDSKEDLLA 360
            VLPDFVKQFSLDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDEDSKEDLLA
Sbjct: 301  VLPDFVKQFSLDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDEDSKEDLLA 360

Query: 361  GVENLEIRDIQTINPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLLLPDAENNKSILM 420
            GVENLEIRDIQTINPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLLLPDAENNKSILM
Sbjct: 361  GVENLEIRDIQTINPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLLLPDAENNKSILM 420

Query: 421  LGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKSRILNTLLSPAQL 480
            LGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKSRILNTLLSPAQL
Sbjct: 421  LGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKSRILNTLLSPAQL 480

Query: 481  KLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVALANLRGNLESFW 540
            KLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVALANLRGNLESFW
Sbjct: 481  KLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVALANLRGNLESFW 540

Query: 541  TQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSSQARESEEAQIFQRIL 600
            TQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSSQARESEEAQIFQRIL
Sbjct: 541  TQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSSQARESEEAQIFQRIL 600

Query: 601  NLKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAALARELGIQVDED 660
            NLKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAALARELGIQVDED
Sbjct: 601  NLKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAALARELGIQVDED 660

Query: 661  FENTQRIQVSSGENMAGTAEGEGQQRHSQLKSSSKSQALMPIQEPGTQCELSQNLQNLYG 720
            FENTQRIQVSSGENMAGTAEGEGQQRHSQLKSSSKSQALMPIQEPGTQCELSQNLQNLYG
Sbjct: 661  FENTQRIQVSSGENMAGTAEGEGQQRHSQLKSSSKSQALMPIQEPGTQCELSQNLQNLYG 720

Query: 721  TPVFRPVLENSWLFPTRIGGNFNHVSLKASWVMGRPFGSEQRPKWFHPLPFQNAGAQGRG 780
            TPVFRPVLENSWLFPTRIGGNFNHVSLKASWVMGRPFGSEQRPKWFHPLPFQNAGAQGRG
Sbjct: 721  TPVFRPVLENSWLFPTRIGGNFNHVSLKASWVMGRPFGSEQRPKWFHPLPFQNAGAQGRG 780

Query: 781  KSFGIQSFHPQIFYSGERFMKFSRVARGCHSNGTFGRLPRPICQHVQACPERPQMMGTLE 840
            KSFGIQSFHPQIFYSGERFMKFSRVARGCHSNGTFGRLPRPICQHVQACPERPQMMGTLE
Sbjct: 781  KSFGIQSFHPQIFYSGERFMKFSRVARGCHSNGTFGRLPRPICQHVQACPERPQMMGTLE 840

Query: 841  RSRAVASKIGHSYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQ 900
            RSRAVASKIGHSYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQ
Sbjct: 841  RSRAVASKIGHSYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQ 900

Query: 901  PAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPF 960
            PAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPF
Sbjct: 901  PAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPF 960

Query: 961  HSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPS 1020
            HSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPS
Sbjct: 961  HSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPS 1020

Query: 1021 QAKAHHSKAGQKRGGKH 1037
            QAKAHHSKAGQKRGGKH
Sbjct: 1021 QAKAHHSKAGQKRGGKH 1037


>gi|117968347 up-regulated gene 4 isoform 1 [Homo sapiens]
          Length = 922

 Score =  221 bits (564), Expect = 2e-57
 Identities = 153/437 (35%), Positives = 234/437 (53%), Gaps = 26/437 (5%)

Query: 251 ETTEFSGEEPSYEGSETSLSLEEEQEKSIEERKKVFKDVLLCLNMDRSRKVLPDFVKQFS 310
           E  E  G++  +   + +   ++    ++E  +      LL L   + +K+      Q S
Sbjct: 31  EWREMEGDDCEFRYGDGTNEAQDNDFPTVERSRLQEMLSLLGLETYQVQKLSLQDSLQIS 90

Query: 311 LDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDE-----------------D 353
            D    W P+ P DL WNFL K+QA +  AR++ +   VL +                 D
Sbjct: 91  FDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKESQMEEEIIYWD 150

Query: 354 SKEDLLAGVENL-EIRDIQT-INPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLLLPD 411
             +DL A + +  E+    T +NPLD+LCA +L SDS LQ+++   M  CQFALPL+LPD
Sbjct: 151 PADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALCQFALPLVLPD 210

Query: 412 AENNKSILMLGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKSRIL 471
           +EN+    +L AM+ IV+   +Q   G     E  + L + P  +FVR+   S SKS++L
Sbjct: 211 SENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVRMDVSSNSKSQLL 270

Query: 472 NTLLSPAQLKLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVALAN 531
           N +LSP   +    F H+DL L    R+ISDGLVEI+W FP    R++   F +PVA  N
Sbjct: 271 NAVLSPGH-RQWDCFWHRDLNLGTNAREISDGLVEISWFFPSG--REDLDIFPEPVAFLN 327

Query: 532 LRGNLESFWTQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSS-QARES 590
           LRG++ S W QF  L E+SSAVF  TD + +KE+ LL  + E+   + YF+LS  + + +
Sbjct: 328 LRGDIGSHWLQFKLLTEISSAVFILTDNISKKEYKLLYSMKEST-TKYYFILSPYRGKRN 386

Query: 591 EEAQIFQRILN-LKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAAL 649
              +   +++  LK        +  + D    ++ ++A +  V+ + C R VSVEDMA  
Sbjct: 387 TNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIVGNVLRAPCRR-VSVEDMAHA 445

Query: 650 ARELGIQVDEDFENTQR 666
           AR+LG++VDED E  Q+
Sbjct: 446 ARKLGLKVDEDCEECQK 462


>gi|117968328 up-regulated gene 4 isoform 3 [Homo sapiens]
          Length = 931

 Score =  221 bits (564), Expect = 2e-57
 Identities = 153/437 (35%), Positives = 234/437 (53%), Gaps = 26/437 (5%)

Query: 251 ETTEFSGEEPSYEGSETSLSLEEEQEKSIEERKKVFKDVLLCLNMDRSRKVLPDFVKQFS 310
           E  E  G++  +   + +   ++    ++E  +      LL L   + +K+      Q S
Sbjct: 40  EWREMEGDDCEFRYGDGTNEAQDNDFPTVERSRLQEMLSLLGLETYQVQKLSLQDSLQIS 99

Query: 311 LDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDE-----------------D 353
            D    W P+ P DL WNFL K+QA +  AR++ +   VL +                 D
Sbjct: 100 FDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKESQMEEEIIYWD 159

Query: 354 SKEDLLAGVENL-EIRDIQT-INPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLLLPD 411
             +DL A + +  E+    T +NPLD+LCA +L SDS LQ+++   M  CQFALPL+LPD
Sbjct: 160 PADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALCQFALPLVLPD 219

Query: 412 AENNKSILMLGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKSRIL 471
           +EN+    +L AM+ IV+   +Q   G     E  + L + P  +FVR+   S SKS++L
Sbjct: 220 SENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVRMDVSSNSKSQLL 279

Query: 472 NTLLSPAQLKLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVALAN 531
           N +LSP   +    F H+DL L    R+ISDGLVEI+W FP    R++   F +PVA  N
Sbjct: 280 NAVLSPGH-RQWDCFWHRDLNLGTNAREISDGLVEISWFFPSG--REDLDIFPEPVAFLN 336

Query: 532 LRGNLESFWTQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSS-QARES 590
           LRG++ S W QF  L E+SSAVF  TD + +KE+ LL  + E+   + YF+LS  + + +
Sbjct: 337 LRGDIGSHWLQFKLLTEISSAVFILTDNISKKEYKLLYSMKEST-TKYYFILSPYRGKRN 395

Query: 591 EEAQIFQRILN-LKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAAL 649
              +   +++  LK        +  + D    ++ ++A +  V+ + C R VSVEDMA  
Sbjct: 396 TNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIVGNVLRAPCRR-VSVEDMAHA 454

Query: 650 ARELGIQVDEDFENTQR 666
           AR+LG++VDED E  Q+
Sbjct: 455 ARKLGLKVDEDCEECQK 471


>gi|117968345 up-regulated gene 4 isoform 2 [Homo sapiens]
          Length = 888

 Score =  219 bits (558), Expect = 1e-56
 Identities = 145/380 (38%), Positives = 213/380 (56%), Gaps = 26/380 (6%)

Query: 308 QFSLDRGCKWTPESPGDLAWNFLMKVQARDVTARDSILSHKVLDE--------------- 352
           Q S D    W P+ P DL WNFL K+QA +  AR++ +   VL +               
Sbjct: 54  QISFDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKESQMEEEII 113

Query: 353 --DSKEDLLAGVENL-EIRDIQT-INPLDVLCATMLCSDSSLQRQVMSNMYQCQFALPLL 408
             D  +DL A + +  E+    T +NPLD+LCA +L SDS LQ+++   M  CQFALPL+
Sbjct: 114 YWDPADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALCQFALPLV 173

Query: 409 LPDAENNKSILMLGAMKDIVKKQSTQFSGGPTEDTEKFLTLMKMPVISFVRLGYCSFSKS 468
           LPD+EN+    +L AM+ IV+   +Q   G     E  + L + P  +FVR+   S SKS
Sbjct: 174 LPDSENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVRMDVSSNSKS 233

Query: 469 RILNTLLSPAQLKLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSDDRKENPFFQKPVA 528
           ++LN +LSP   +    F H+DL L    R+ISDGLVEI+W FP    R++   F +PVA
Sbjct: 234 QLLNAVLSPGH-RQWDCFWHRDLNLGTNAREISDGLVEISWFFPSG--REDLDIFPEPVA 290

Query: 529 LANLRGNLESFWTQFGFLMEVSSAVFFFTDCLGEKEWDLLMFLGEAAIERCYFVLSS-QA 587
             NLRG++ S W QF  L E+SSAVF  TD + +KE+ LL  + E+   + YF+LS  + 
Sbjct: 291 FLNLRGDIGSHWLQFKLLTEISSAVFILTDNISKKEYKLLYSMKEST-TKYYFILSPYRG 349

Query: 588 RESEEAQIFQRILN-LKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDM 646
           + +   +   +++  LK        +  + D    ++ ++A +  V+ + C R VSVEDM
Sbjct: 350 KRNTNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIVGNVLRAPCRR-VSVEDM 408

Query: 647 AALARELGIQVDEDFENTQR 666
           A  AR+LG++VDED E  Q+
Sbjct: 409 AHAARKLGLKVDEDCEECQK 428


>gi|4505419 nucleolar protein 3 [Homo sapiens]
          Length = 208

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 11/125 (8%)

Query: 4   ESTPSEIIERERKKLLEILQHDPDSILDTLTSRRLISEEEYETLENVTDLLKKSRKLLIL 63
           +  PSE I+RERK+L+E LQ D   +LD L +R +++  EYE L+ + D  ++ R+LL+L
Sbjct: 5   QERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRRLLLL 64

Query: 64  VQKKGEATCQHFLKCLFSTFPQSAAICGLRHEVLKHENTVPPQSMGASSNSEDAFSPGIK 123
           VQ KGEA CQ  L+C   T        G        ++  P    G    S D   PG  
Sbjct: 65  VQGKGEAACQELLRCAQRT-------AGAPDPAWDWQHVGP----GYRDRSYDPPCPGHW 113

Query: 124 QPEAP 128
            PEAP
Sbjct: 114 TPEAP 118


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 888  TSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIG----SHPMCKSSQFK 943
            T  +G P P + QP   +    P   +   ++  G    PA Q G    S      ++  
Sbjct: 412  TQQVGTPKPLAQQPGLQSPAKAPGPTK-TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPP 470

Query: 944  SDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK 1003
            S    P+     QP P    P QP S++  S   QP  TKP P +    KPS   P  +K
Sbjct: 471  SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS--QQPGSTKPPPQQPGPAKPSPQQPGSTK 528

Query: 1004 PSQPRPPQPKSSSTNPSQAK 1023
            P   +P   K S+  PS AK
Sbjct: 529  PPSQQPGSAKPSAQQPSPAK 548



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 11/156 (7%)

Query: 892  GKPHPQSFQPAAATQKLRPASQQGVQMKTQ----GGASNPALQIGSHPMCKSSQFKSDQS 947
            G P   S Q     +   P + + +Q  TQ      A  P  +  S P  K +     +S
Sbjct: 234  GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES 293

Query: 948  -NPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKP--SPCKSTQPKPSQPW---PPQ 1001
              PS    S+P      P +P + Q    +SQP   KP   P   T+P   QP    PP 
Sbjct: 294  VKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPV 353

Query: 1002 SKPSQPRPP-QPKSSSTNPSQAKAHHSKAGQKRGGK 1036
              P   +PP QP   +  P+Q       + ++ G K
Sbjct: 354  QPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK 389



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 49/174 (28%), Positives = 63/174 (36%), Gaps = 26/174 (14%)

Query: 859  PARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQM 918
            P + VG P P      +    +A G     + + +P P       A      A Q G   
Sbjct: 411  PTQQVGTPKPLAQQPGLQSPAKAPGPT--KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468

Query: 919  ---KTQGGASNPALQIG--SHPMCKSSQFKSDQSNPSTVKH--SQPKPFHSVPSQPKSSQ 971
               +  G A  P  Q G    P  +    K     P + K    QP P    P QP S++
Sbjct: 469  PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528

Query: 972  TKSCQ--------SQPSQTKPSPCKSTQP-------KPSQPWPPQSKPSQPRPP 1010
              S Q         QPS  KPS  +ST+P       KP Q  PP   PS  +PP
Sbjct: 529  PPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ--PPTVSPSAKQPP 580



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 49/185 (26%), Positives = 64/185 (34%), Gaps = 35/185 (18%)

Query: 882  TGKLIRTSHIGK--PHPQSFQP---AAATQKLRPASQQG-----VQMKTQGGASNPALQI 931
            T  +  TS + K  P PQ   P   AA  Q L  A +       V+  T  G+  P+ + 
Sbjct: 663  TAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGS--PSAKA 720

Query: 932  GSHPMCKSSQFKSDQSNPSTVKHSQPKPF-HSVPSQPK------------SSQTK----- 973
               P   S    +    PS        P     P QPK            S+ TK     
Sbjct: 721  KQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPS 780

Query: 974  -SCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQP----RPPQPKSSSTNPSQAKAHHSK 1028
               QSQ  +    P K+   KPSQ +PP  +   P      P+P S S   S        
Sbjct: 781  SKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSES 840

Query: 1029 AGQKR 1033
             GQK+
Sbjct: 841  KGQKQ 845



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKS---SQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQS 1002
            Q  P++   S      S+P++P+    S +    +QP    P P     P P  P PP  
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428

Query: 1003 KPSQPRP---PQPKSSSTNP 1019
             P+ P+P   P+ K +  +P
Sbjct: 2429 PPTSPKPTILPKKKLTVASP 2448



 Score = 35.4 bits (80), Expect = 0.28
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 7/125 (5%)

Query: 909  RPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPK 968
            RP ++Q   ++  G +  P+L   S P  +        +     + SQP P    P+QP 
Sbjct: 280  RPQTKQADIVR--GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKP-PAQP- 335

Query: 969  SSQTKSCQSQPSQTKP--SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHH 1026
            S  TK    QP   KP   P  +T+P P+QP  P   P+Q    +  SS     +A A  
Sbjct: 336  SGLTKPLAQQPGTVKPPVQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP 394

Query: 1027 SKAGQ 1031
               G+
Sbjct: 395  PGVGK 399



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 935  PMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKP 994
            P  K+   K  QS P T +   P    ++P     S+  S     S++K         K 
Sbjct: 793  PPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKK 852

Query: 995  SQPWPPQSKPSQPRP---PQPKSSSTNP 1019
             +P   Q+K S P+P   P PK S T P
Sbjct: 853  EEPKKAQTKMS-PKPDAKPMPKGSPTPP 879



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 31/203 (15%)

Query: 819  PRPICQHVQACPERPQMMGTLERSRAVASKIGH-SYSLDSQPARAVGKPWPQQACTRV-- 875
            PRP     Q  P   Q     E+SR  +  +G  + +  SQP        PQ+  T    
Sbjct: 881  PRPTAG--QTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTT------PQETVTGKLF 932

Query: 876  ---TELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIG 932
                 +      LI T+  G+P P S     A  K  PA  Q     T  G      Q  
Sbjct: 933  GFGASIFSQASNLISTA--GQPGPHSQSGPGAPMKQAPAPSQP---PTSQGPPKSTGQAP 987

Query: 933  SHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQP 992
              P  KS   K +   P+  K            +PK+ Q  + +   ++ KP P K ++ 
Sbjct: 988  PAP-AKSIPVKKETKAPAAEK-----------LEPKAEQAPTVKRTETEKKPPPIKDSKS 1035

Query: 993  KPSQPWPPQSKPSQPRPPQPKSS 1015
              ++P          + P+P+S+
Sbjct: 1036 LTAEPQKAVLPTKLEKSPKPEST 1058



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 33/141 (23%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 892  GKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPST 951
            G   P + QP      ++P        +  G A  PA Q GS          S+Q  P  
Sbjct: 337  GLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKP------SSEQPGPKA 390

Query: 952  VKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQ-PRPP 1010
            +  +QP      P+Q           QP   KP   +   PKP    P    P++ P P 
Sbjct: 391  L--AQPPGVGKTPAQ-----------QPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437

Query: 1011 QPKSSSTNPSQAKAHHSKAGQ 1031
            +       P +  A  +  G+
Sbjct: 438  KTPVQQPGPGKIPAQQAGPGK 458



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 926  NPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPS 985
            NP L      +C + Q K           S P+P   + + P ++ +   +S P   + S
Sbjct: 626  NPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQP--KLKTAPVTTTSAVSKSSPQPQQTS 683

Query: 986  PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAK 1023
            P K   PK      P+ K   P   QP    +  ++AK
Sbjct: 684  PKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 21/120 (17%)

Query: 897  QSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQ 956
            QSF P    +K+ P   + +             +I SHP   S      Q +P   K   
Sbjct: 804  QSFPPTG--EKVSPFDSKAIPRPASDS------KIISHPGPSSESKGQKQVDPVQKKE-- 853

Query: 957  PKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSS 1016
                     +PK +QTK   S     KP P  S  P   +P   Q+ P+  + P+P+  S
Sbjct: 854  ---------EPKKAQTK--MSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS 902



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 894  PHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVK 953
            P  ++  P      L  +  Q  + K +G  +   +Q G  P  K       +  PS   
Sbjct: 1250 PEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKM------EGLPSGTP 1303

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPK 1013
             S PK         K      C ++P Q +P   K+ +          S   QP+ PQ  
Sbjct: 1304 QSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKS---DTSSSQQPKSPQGL 1360

Query: 1014 SSS 1016
            S +
Sbjct: 1361 SDT 1363


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 888  TSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIG----SHPMCKSSQFK 943
            T  +G P P + QP   +    P   +   ++  G    PA Q G    S      ++  
Sbjct: 412  TQQVGTPKPLAQQPGLQSPAKAPGPTK-TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPP 470

Query: 944  SDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK 1003
            S    P+     QP P    P QP S++  S   QP  TKP P +    KPS   P  +K
Sbjct: 471  SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS--QQPGSTKPPPQQPGPAKPSPQQPGSTK 528

Query: 1004 PSQPRPPQPKSSSTNPSQAK 1023
            P   +P   K S+  PS AK
Sbjct: 529  PPSQQPGSAKPSAQQPSPAK 548



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 11/156 (7%)

Query: 892  GKPHPQSFQPAAATQKLRPASQQGVQMKTQ----GGASNPALQIGSHPMCKSSQFKSDQS 947
            G P   S Q     +   P + + +Q  TQ      A  P  +  S P  K +     +S
Sbjct: 234  GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES 293

Query: 948  -NPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKP--SPCKSTQPKPSQPW---PPQ 1001
              PS    S+P      P +P + Q    +SQP   KP   P   T+P   QP    PP 
Sbjct: 294  VKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPV 353

Query: 1002 SKPSQPRPP-QPKSSSTNPSQAKAHHSKAGQKRGGK 1036
              P   +PP QP   +  P+Q       + ++ G K
Sbjct: 354  QPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK 389



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 49/174 (28%), Positives = 63/174 (36%), Gaps = 26/174 (14%)

Query: 859  PARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQM 918
            P + VG P P      +    +A G     + + +P P       A      A Q G   
Sbjct: 411  PTQQVGTPKPLAQQPGLQSPAKAPGPT--KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468

Query: 919  ---KTQGGASNPALQIG--SHPMCKSSQFKSDQSNPSTVKH--SQPKPFHSVPSQPKSSQ 971
               +  G A  P  Q G    P  +    K     P + K    QP P    P QP S++
Sbjct: 469  PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528

Query: 972  TKSCQ--------SQPSQTKPSPCKSTQP-------KPSQPWPPQSKPSQPRPP 1010
              S Q         QPS  KPS  +ST+P       KP Q  PP   PS  +PP
Sbjct: 529  PPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ--PPTVSPSAKQPP 580



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 49/185 (26%), Positives = 64/185 (34%), Gaps = 35/185 (18%)

Query: 882  TGKLIRTSHIGK--PHPQSFQP---AAATQKLRPASQQG-----VQMKTQGGASNPALQI 931
            T  +  TS + K  P PQ   P   AA  Q L  A +       V+  T  G+  P+ + 
Sbjct: 663  TAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGS--PSAKA 720

Query: 932  GSHPMCKSSQFKSDQSNPSTVKHSQPKPF-HSVPSQPK------------SSQTK----- 973
               P   S    +    PS        P     P QPK            S+ TK     
Sbjct: 721  KQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPS 780

Query: 974  -SCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQP----RPPQPKSSSTNPSQAKAHHSK 1028
               QSQ  +    P K+   KPSQ +PP  +   P      P+P S S   S        
Sbjct: 781  SKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSES 840

Query: 1029 AGQKR 1033
             GQK+
Sbjct: 841  KGQKQ 845



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKS---SQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQS 1002
            Q  P++   S      S+P++P+    S +    +QP    P P     P P  P PP  
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428

Query: 1003 KPSQPRP---PQPKSSSTNP 1019
             P+ P+P   P+ K +  +P
Sbjct: 2429 PPTSPKPTILPKKKLTVASP 2448



 Score = 35.4 bits (80), Expect = 0.28
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 7/125 (5%)

Query: 909  RPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPK 968
            RP ++Q   ++  G +  P+L   S P  +        +     + SQP P    P+QP 
Sbjct: 280  RPQTKQADIVR--GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKP-PAQP- 335

Query: 969  SSQTKSCQSQPSQTKP--SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHH 1026
            S  TK    QP   KP   P  +T+P P+QP  P   P+Q    +  SS     +A A  
Sbjct: 336  SGLTKPLAQQPGTVKPPVQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP 394

Query: 1027 SKAGQ 1031
               G+
Sbjct: 395  PGVGK 399



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 935  PMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKP 994
            P  K+   K  QS P T +   P    ++P     S+  S     S++K         K 
Sbjct: 793  PPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKK 852

Query: 995  SQPWPPQSKPSQPRP---PQPKSSSTNP 1019
             +P   Q+K S P+P   P PK S T P
Sbjct: 853  EEPKKAQTKMS-PKPDAKPMPKGSPTPP 879



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 31/203 (15%)

Query: 819  PRPICQHVQACPERPQMMGTLERSRAVASKIGH-SYSLDSQPARAVGKPWPQQACTRV-- 875
            PRP     Q  P   Q     E+SR  +  +G  + +  SQP        PQ+  T    
Sbjct: 881  PRPTAG--QTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTT------PQETVTGKLF 932

Query: 876  ---TELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIG 932
                 +      LI T+  G+P P S     A  K  PA  Q     T  G      Q  
Sbjct: 933  GFGASIFSQASNLISTA--GQPGPHSQSGPGAPMKQAPAPSQP---PTSQGPPKSTGQAP 987

Query: 933  SHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQP 992
              P  KS   K +   P+  K            +PK+ Q  + +   ++ KP P K ++ 
Sbjct: 988  PAP-AKSIPVKKETKAPAAEK-----------LEPKAEQAPTVKRTETEKKPPPIKDSKS 1035

Query: 993  KPSQPWPPQSKPSQPRPPQPKSS 1015
              ++P          + P+P+S+
Sbjct: 1036 LTAEPQKAVLPTKLEKSPKPEST 1058



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 33/141 (23%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 892  GKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPST 951
            G   P + QP      ++P        +  G A  PA Q GS          S+Q  P  
Sbjct: 337  GLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKP------SSEQPGPKA 390

Query: 952  VKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQ-PRPP 1010
            +  +QP      P+Q           QP   KP   +   PKP    P    P++ P P 
Sbjct: 391  L--AQPPGVGKTPAQ-----------QPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437

Query: 1011 QPKSSSTNPSQAKAHHSKAGQ 1031
            +       P +  A  +  G+
Sbjct: 438  KTPVQQPGPGKIPAQQAGPGK 458



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 926  NPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPS 985
            NP L      +C + Q K           S P+P   + + P ++ +   +S P   + S
Sbjct: 626  NPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQP--KLKTAPVTTTSAVSKSSPQPQQTS 683

Query: 986  PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAK 1023
            P K   PK      P+ K   P   QP    +  ++AK
Sbjct: 684  PKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 21/120 (17%)

Query: 897  QSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQ 956
            QSF P    +K+ P   + +             +I SHP   S      Q +P   K   
Sbjct: 804  QSFPPTG--EKVSPFDSKAIPRPASDS------KIISHPGPSSESKGQKQVDPVQKKE-- 853

Query: 957  PKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSS 1016
                     +PK +QTK   S     KP P  S  P   +P   Q+ P+  + P+P+  S
Sbjct: 854  ---------EPKKAQTK--MSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS 902



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 894  PHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVK 953
            P  ++  P      L  +  Q  + K +G  +   +Q G  P  K       +  PS   
Sbjct: 1250 PEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKM------EGLPSGTP 1303

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPK 1013
             S PK         K      C ++P Q +P   K+ +          S   QP+ PQ  
Sbjct: 1304 QSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKS---DTSSSQQPKSPQGL 1360

Query: 1014 SSS 1016
            S +
Sbjct: 1361 SDT 1363


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 54/200 (27%), Positives = 74/200 (37%), Gaps = 31/200 (15%)

Query: 840  ERSRAVASKIGHSYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSF 899
            ER  A   ++G     D Q   A+      +   R+ EL+   G+++RT           
Sbjct: 278  ERDMAWVKRVG-----DDQVNLALAYTELTEELGRLRELSSLQGRILRTL-------LQE 325

Query: 900  QPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKP 959
            Q  +  Q+  P SQ+          S PA      P C+S         P   + S   P
Sbjct: 326  QARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQS---------PVPQRRSPVPP 376

Query: 960  FHSVPSQPKSSQTKSCQSQPSQTK---PSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSS 1016
              S P Q +S  + SC S   Q +   P  C+S  P+   P PP     QPRPP P    
Sbjct: 377  CPS-PQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPPG 435

Query: 1017 TNPSQAKA------HHSKAG 1030
                  +A      HH KAG
Sbjct: 436  ERTLAERAYAKPPSHHVKAG 455


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)

Query: 894  PHPQSFQPAAATQ--KLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNP-- 949
            PHPQ  QP  + Q     P +Q   Q + Q  +  P LQ    P  +       Q +P  
Sbjct: 476  PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ--SQPPQLQSSQPPYSQQPSQPPHQQSPAP 533

Query: 950  ------STVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC--KSTQPKPSQPWPPQ 1001
                  +T +H Q +P +S P     +Q+   Q QP Q  PS    ++  P+P      Q
Sbjct: 534  YPSQQSTTQQHPQSQPPYSQP----QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQ 589

Query: 1002 SKPSQPR--PPQPKSSSTNPSQAKAHHSKAGQKRG 1034
            +  SQ R  PPQ  S  +  SQA +  S    K G
Sbjct: 590  TAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGG 624



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 20/134 (14%)

Query: 905  TQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQP------- 957
            TQ++ P  QQG     Q G +    Q   HP  +   +   Q  PS   H+QP       
Sbjct: 448  TQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS--QQPPSQTPHAQPSYQQQPQ 505

Query: 958  -KPFHSVPSQPKSSQTKSCQSQPSQTKPSPC---KSTQPKPSQPWPPQSKPS-----QPR 1008
             +P     SQP  SQ  S    P Q  P+P    +ST  +  Q  PP S+P      Q +
Sbjct: 506  SQPPQLQSSQPPYSQQPS--QPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ 563

Query: 1009 PPQPKSSSTNPSQA 1022
             PQ  + ST   QA
Sbjct: 564  QPQQPAPSTLSQQA 577



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 46/162 (28%), Positives = 60/162 (37%), Gaps = 38/162 (23%)

Query: 896  PQSFQPAAATQKLRP---------ASQQGVQMKTQGGASNPALQIGS-----HPMCKSSQ 941
            PQ   P     K+RP         + QQG     Q G   P    GS     +PM    +
Sbjct: 378  PQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGR 437

Query: 942  FKS--------------DQSNPSTVKHSQPKPFHSVPS-QPKSSQTKSCQSQPSQTKPSP 986
             +S               Q  PS        P+++  S  P+  Q    Q  PSQT P  
Sbjct: 438  AQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQT-PHA 496

Query: 987  CKSTQPKPSQPWPPQSKPSQP-------RPPQPKSSSTNPSQ 1021
              S Q +P Q  PPQ + SQP       +PP  +S +  PSQ
Sbjct: 497  QPSYQQQP-QSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQ 537



 Score = 31.6 bits (70), Expect = 4.1
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 13/121 (10%)

Query: 892  GKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPST 951
            G   P  + P    Q+ +     G Q  TQG  S         P  +++ ++  Q N   
Sbjct: 1317 GMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPF-----PSQQTTMYQQQQQN--- 1368

Query: 952  VKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP-PQSKPSQPRPP 1010
                  +P       P         S P  T     +  Q  P+QP P  Q + +QP P 
Sbjct: 1369 ----YKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQ 1424

Query: 1011 Q 1011
            Q
Sbjct: 1425 Q 1425



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 979  PSQTKPSPCKSTQPKPSQPWPPQSKPSQPRP-PQPKSSSTNPSQAKAHHSKAGQKRGG 1035
            P  T+P P     P   Q   PQ   S P P P+P  + T+PS++   HS    ++ G
Sbjct: 1562 PPMTRPPPSNYQPPPSMQNHIPQ--VSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAG 1617


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)

Query: 894  PHPQSFQPAAATQ--KLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNP-- 949
            PHPQ  QP  + Q     P +Q   Q + Q  +  P LQ    P  +       Q +P  
Sbjct: 476  PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ--SQPPQLQSSQPPYSQQPSQPPHQQSPAP 533

Query: 950  ------STVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC--KSTQPKPSQPWPPQ 1001
                  +T +H Q +P +S P     +Q+   Q QP Q  PS    ++  P+P      Q
Sbjct: 534  YPSQQSTTQQHPQSQPPYSQP----QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQ 589

Query: 1002 SKPSQPR--PPQPKSSSTNPSQAKAHHSKAGQKRG 1034
            +  SQ R  PPQ  S  +  SQA +  S    K G
Sbjct: 590  TAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGG 624



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 20/134 (14%)

Query: 905  TQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQP------- 957
            TQ++ P  QQG     Q G +    Q   HP  +   +   Q  PS   H+QP       
Sbjct: 448  TQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS--QQPPSQTPHAQPSYQQQPQ 505

Query: 958  -KPFHSVPSQPKSSQTKSCQSQPSQTKPSPC---KSTQPKPSQPWPPQSKPS-----QPR 1008
             +P     SQP  SQ  S    P Q  P+P    +ST  +  Q  PP S+P      Q +
Sbjct: 506  SQPPQLQSSQPPYSQQPS--QPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ 563

Query: 1009 PPQPKSSSTNPSQA 1022
             PQ  + ST   QA
Sbjct: 564  QPQQPAPSTLSQQA 577



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 46/162 (28%), Positives = 60/162 (37%), Gaps = 38/162 (23%)

Query: 896  PQSFQPAAATQKLRP---------ASQQGVQMKTQGGASNPALQIGS-----HPMCKSSQ 941
            PQ   P     K+RP         + QQG     Q G   P    GS     +PM    +
Sbjct: 378  PQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGR 437

Query: 942  FKS--------------DQSNPSTVKHSQPKPFHSVPS-QPKSSQTKSCQSQPSQTKPSP 986
             +S               Q  PS        P+++  S  P+  Q    Q  PSQT P  
Sbjct: 438  AQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQT-PHA 496

Query: 987  CKSTQPKPSQPWPPQSKPSQP-------RPPQPKSSSTNPSQ 1021
              S Q +P Q  PPQ + SQP       +PP  +S +  PSQ
Sbjct: 497  QPSYQQQP-QSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQ 537



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 947  SNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQP---WPPQSK 1003
            SNP +  +S  +     P Q +  Q +   S  +Q       S  P PSQ    +  Q +
Sbjct: 1312 SNPDSGMYSPSR----YPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQ 1367

Query: 1004 PSQPRP-PQPKSSSTNPSQAKAHHSKAGQKRGG 1035
             S P P P+P  + T+PS++   HS    ++ G
Sbjct: 1368 VSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAG 1400


>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
          Length = 1446

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 945  DQSNPSTVKHSQPKPFHSV-----PSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP 999
            DQ +PS V  SQ  P          SQ   SQ  + Q  PSQ  PS   ++    SQ  P
Sbjct: 644  DQGSPSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNPSQRSTSHANSSQGSP 703

Query: 1000 PQSKPSQPRPPQPKSSSTNPS 1020
             Q  PSQ  P Q  +S  +PS
Sbjct: 704  SQGSPSQESPSQGSTSQASPS 724



 Score = 47.0 bits (110), Expect = 9e-05
 Identities = 34/105 (32%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 914  QGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTK 973
            +GV+ +    A    +  GS      SQ    Q +PS     Q     + PSQ  +SQ  
Sbjct: 628  KGVEQEVPSTAPGLGMDQGS-----PSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGS 682

Query: 974  SCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTN 1018
              Q  PSQ   S   S+Q  PSQ  P Q  PSQ    Q   S  N
Sbjct: 683  PSQVNPSQRSTSHANSSQGSPSQGSPSQESPSQGSTSQASPSHRN 727



 Score = 37.7 bits (86), Expect = 0.057
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 910  PASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKS 969
            P++  G+ M  QG  S      GS       Q  + Q++PS    SQ  P     SQ   
Sbjct: 635  PSTAPGLGMD-QGSPSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGSP-----SQVNP 688

Query: 970  SQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHS 1027
            SQ  +  +  SQ  PS    +Q  PSQ    Q+ PS         ++++P    + HS
Sbjct: 689  SQRSTSHANSSQGSPSQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHS 746



 Score = 31.6 bits (70), Expect = 4.1
 Identities = 39/165 (23%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 852  SYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIR--TSHIGKPHPQSFQPAAATQKLR 909
            +++L   P    G P   QA T           ++    ++ GK   Q     A    + 
Sbjct: 585  NFTLSPSPGYPQGTPAAGQAWTPEPSPRRGGSNVVGYDRNNTGKGVEQEVPSTAPGLGMD 644

Query: 910  PASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHS------- 962
              S   V   +QG  S  +L+  S      SQ  + Q +PS V  SQ    H+       
Sbjct: 645  QGSPSQVN-PSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNPSQRSTSHANSSQGSP 703

Query: 963  ---VPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKP 1004
                PSQ   SQ  + Q+ PS         T   P       S P
Sbjct: 704  SQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHSFP 748


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 11/140 (7%)

Query: 887  RTSHIG--KPHPQSFQPAAATQ-KLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFK 943
            ++S +G  +  PQ+ QP+A  Q + +P S    +++TQ         + SH   ++    
Sbjct: 2385 QSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTT-VSSHVPSEAQPTH 2443

Query: 944  SDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK 1003
            +  S P     SQP+      S  +       QS PSQT+  P   +Q  P Q    Q+ 
Sbjct: 2444 AQSSKPQVAAQSQPQ------SNVQGQSPVRVQS-PSQTRIRPSTPSQLSPGQQSQVQTT 2496

Query: 1004 PSQPRPPQPKSSSTNPSQAK 1023
             SQP P QP +S   PSQ +
Sbjct: 2497 TSQPIPIQPHTSLQIPSQGQ 2516



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 14/112 (12%)

Query: 935  PMCKSSQFKSDQSNPSTVKHS-QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPK 993
            P  +SS     ++ P T + S QP+P     +QP+S      Q+QP     +   S  P 
Sbjct: 2382 PPAQSSSVGPAEAQPQTAQPSAQPQP----QTQPQSPAQPEVQTQPEVQTQTTVSSHVPS 2437

Query: 994  PSQPWPPQ-SKPSQPRPPQPKSS--------STNPSQAKAHHSKAGQKRGGK 1036
             +QP   Q SKP      QP+S+          +PSQ +   S   Q   G+
Sbjct: 2438 EAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQ 2489



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 898  SFQPAAATQKLRP--ASQQGVQMKTQ---GGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            SFQP  AT  +RP  +   G    +Q   G    P + +   P+ +S+  K+    P  V
Sbjct: 2151 SFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMV 2210

Query: 953  KHSQPKPFHS--VPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPP 1010
            +   P+   +  +  QP S+      S P+    +P + +    +     QS  SQP  P
Sbjct: 2211 QPGAPQQVMTQIIRGQPVSTAV----SAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRP 2266

Query: 1011 Q 1011
            Q
Sbjct: 2267 Q 2267


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 11/140 (7%)

Query: 887  RTSHIG--KPHPQSFQPAAATQ-KLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFK 943
            ++S +G  +  PQ+ QP+A  Q + +P S    +++TQ         + SH   ++    
Sbjct: 2259 QSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTT-VSSHVPSEAQPTH 2317

Query: 944  SDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK 1003
            +  S P     SQP+      S  +       QS PSQT+  P   +Q  P Q    Q+ 
Sbjct: 2318 AQSSKPQVAAQSQPQ------SNVQGQSPVRVQS-PSQTRIRPSTPSQLSPGQQSQVQTT 2370

Query: 1004 PSQPRPPQPKSSSTNPSQAK 1023
             SQP P QP +S   PSQ +
Sbjct: 2371 TSQPIPIQPHTSLQIPSQGQ 2390



 Score = 36.2 bits (82), Expect = 0.16
 Identities = 46/166 (27%), Positives = 59/166 (35%), Gaps = 11/166 (6%)

Query: 854  SLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQ 913
            S   QP      P   +  T+    T+ T      S     H QS +P  A Q      Q
Sbjct: 2276 SAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQS---QPQ 2332

Query: 914  QGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTK 973
              VQ ++     +P+ Q    P   S      QS   T   SQP     +P QP +S   
Sbjct: 2333 SNVQGQSPVRVQSPS-QTRIRPSTPSQLSPGQQSQVQTTT-SQP-----IPIQPHTSLQI 2385

Query: 974  SCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
              Q QP Q++P    STQ   S     Q   S P  PQ +     P
Sbjct: 2386 PSQGQP-QSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQP 2430



 Score = 35.8 bits (81), Expect = 0.22
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 14/112 (12%)

Query: 935  PMCKSSQFKSDQSNPSTVKHS-QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPK 993
            P  +SS     ++ P T + S QP+P     +QP+S      Q+QP     +   S  P 
Sbjct: 2256 PPAQSSSVGPAEAQPQTAQPSAQPQP----QTQPQSPAQPEVQTQPEVQTQTTVSSHVPS 2311

Query: 994  PSQPWPPQ-SKPSQPRPPQPKSS--------STNPSQAKAHHSKAGQKRGGK 1036
             +QP   Q SKP      QP+S+          +PSQ +   S   Q   G+
Sbjct: 2312 EAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQ 2363



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 898  SFQPAAATQKLRP--ASQQGVQMKTQ---GGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            SFQP  AT  +RP  +   G    +Q   G    P + +   P+ +S+  K+    P  V
Sbjct: 2025 SFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMV 2084

Query: 953  KHSQPKPFHS--VPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPP 1010
            +   P+   +  +  QP S+      S P+    +P + +    +     QS  SQP  P
Sbjct: 2085 QPGAPQQVMTQIIRGQPVSTAV----SAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRP 2140

Query: 1011 Q 1011
            Q
Sbjct: 2141 Q 2141


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 12/136 (8%)

Query: 887  RTSHIGKPHPQSFQPAAATQKLRPASQQGVQM-------KTQGGASNPALQIGSHPMCKS 939
            + + +  P P    P   +QKL P      Q          +   SNP  Q  SH   ++
Sbjct: 178  KPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSH-FPET 236

Query: 940  SQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP 999
                S  S  S V  + P+P+   P+    S+  +  + P   KPSP +S  P+P +P+P
Sbjct: 237  LGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSES--PEPWKPFP 294

Query: 1000 PQSKPSQPRPPQPKSS 1015
              S   +PR P P  S
Sbjct: 295  AVS--PEPRRPAPAVS 308



 Score = 34.3 bits (77), Expect = 0.63
 Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 16/163 (9%)

Query: 856  DSQPARAVGKPWPQQACTRVTELTEAT---GKLIRTSHIGKPHPQSFQPAAATQKLRPAS 912
            +SQ    V  P PQ+      E  +AT    K  + SH     P++  P +A+    P  
Sbjct: 195  ESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHF----PETLGPPSASSPESPV- 249

Query: 913  QQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQT 972
               +    +    +PA    S    +++  +  + +PS      P+P+   P+     + 
Sbjct: 250  ---LAASPEPWGPSPAASPESRKSARTTSPEPRKPSPS----ESPEPWKPFPAVSPEPRR 302

Query: 973  KSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSS 1015
             +    P   KP P  S +P  S P    S P +P  P P  S
Sbjct: 303  PAPAVSPGSWKPGPPGSPRPWKSNP-SASSGPWKPAKPAPSVS 344



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 24/114 (21%)

Query: 937  CKSSQFKS-------DQSNPSTVKHSQPKPFHSVPSQPK------SSQTKSCQSQPSQTK 983
            C S++ KS        Q   S +    PKP    P +P+      S + ++    P  +K
Sbjct: 119  CNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSK 178

Query: 984  PSPCKSTQPKPSQPW--------PPQSKPSQPRPPQP---KSSSTNPSQAKAHH 1026
            P+   S +P  S P          P  +P +P P  P   K++ +NP   K  H
Sbjct: 179  PASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSH 232



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 34/138 (24%), Positives = 48/138 (34%), Gaps = 22/138 (15%)

Query: 894  PHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVK 953
            P P    PA + +  RPA          G   +P     S+P   S  +K  +  PS   
Sbjct: 287  PEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPR-PWKSNPSASSGPWKPAKPAPSV-- 343

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQ-- 1011
               P P+  +PS             P   KP+P  S+    S    P S  S P  P+  
Sbjct: 344  --SPGPWKPIPSV-----------SPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESW 390

Query: 1012 ----PKSSSTNPSQAKAH 1025
                P+   T P+ +  H
Sbjct: 391  KSGPPELRKTAPTLSPEH 408


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 4/130 (3%)

Query: 896  PQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHS 955
            P     + A   + PAS  G     +  A+ P+ +I +  + KS   K    + S V   
Sbjct: 324  PAKLSASNALDPMLPASVGGSTRTPRPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIK 383

Query: 956  QPKPFH-SVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKS 1014
             P P   + PS    S   + +  P  ++P P + ++P      P Q  P  PRPP P +
Sbjct: 384  SPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEK---PIQRNPGMPRPPPPST 440

Query: 1015 SSTNPSQAKA 1024
                P+ + +
Sbjct: 441  RPLPPTTSSS 450



 Score = 36.2 bits (82), Expect = 0.16
 Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 40/244 (16%)

Query: 830  PERPQMMGTLERSRAVASKIGHSYSLDSQPARAVG------KPWPQQACTRVTEL----- 878
            P +   +G   ++  + +K+  S +LD     +VG      +P   Q   ++T       
Sbjct: 308  PHQHMAVGGPAQTPLLPAKLSASNALDPMLPASVGGSTRTPRPAAAQPSQKITATKIPKS 367

Query: 879  --TEATGKLIRTSHIGKPHP------QSFQPAAA-TQKLRPASQQGVQMKTQGGASNPAL 929
              T+ +        I  PHP       SF  +A  TQK  P + + V  +    A  P  
Sbjct: 368  LPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKPIQ 427

Query: 930  QIGSHPMCKSSQFKSDQSNPSTVKHSQPKP--------FHSVPSQPKSSQTKSCQSQP-- 979
            +    P  +     +    P+T    +P P          S  S+P S++T + +  P  
Sbjct: 428  RNPGMP--RPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKPPPFT 485

Query: 980  ---SQTKPSP--CKSTQPKPSQPWPPQSKPSQPR--PPQPKSSSTNPSQAKAHHSKAGQK 1032
               S   P+P   +ST+P P+   PP S  S PR  P  P   S      K   S+A +K
Sbjct: 486  ALSSSPAPTPGSTRSTRP-PATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKK 544

Query: 1033 RGGK 1036
             G K
Sbjct: 545  AGPK 548



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 42/168 (25%), Positives = 56/168 (33%), Gaps = 22/168 (13%)

Query: 865  KPWPQQACTRVTELTEATGKLIRTSHIGKPHP---QSFQPAAATQKLRPASQQGVQMKTQ 921
            KP P  A T     + A+      +   KP P    S  PA      R        +   
Sbjct: 452  KPIPTLARTEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPT 511

Query: 922  GGASNPALQI-----GSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQ 976
             G S P         GS P        S+ S  +  K S  KP   VP +P         
Sbjct: 512  SGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKP---VPLRP--------- 559

Query: 977  SQPSQTKPSPCKSTQPKPSQPWPPQSKPSQ--PRPPQPKSSSTNPSQA 1022
             + ++  P    +T+P P QP P Q         P Q  SSS  P+ +
Sbjct: 560  GKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSS 607


>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
          Length = 1352

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 44/234 (18%)

Query: 833  PQMMGTLERSRAVASKIGHSYSLDSQPARAVGKPWPQQACTRVTELTEATGKLIRTSHIG 892
            P + G  + +  +A  +  S S+DS P + V  P    +  +  E T             
Sbjct: 977  PPLSGPFDNNNQIAY-VDQSDSVDSSPVKEVKAPSHPGSLAKKPESTT------------ 1023

Query: 893  KPHPQS---FQPAAATQKLRPA-SQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSN 948
            K  P S    +P  + +K RPA + Q   + +   +S   +++   P    S+ K+D S+
Sbjct: 1024 KRSPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSPLPVKVSLKP--SRSRSKADSSS 1081

Query: 949  PSTVKHSQPKPFH-SVPSQPKSSQTKSCQSQPSQ----------TKPSPCKSTQPKPSQP 997
              + +HS P P      S PKS  + S  S   Q          +  S  K++ P    P
Sbjct: 1082 RGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASALTYTASSTSAKKASGPATRSP 1141

Query: 998  WPP-------------QSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQKRG-GKH 1037
            +PP              S+ S        +S++ P+  +   ++AG+ RG GKH
Sbjct: 1142 FPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKH 1195


>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 898  SFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQS----NPSTVK 953
            S+   +++  L  +S    Q     G+S   +Q  S     +   KS QS     P + +
Sbjct: 1588 SYGGLSSSSSLTQSSCVVTQQMASMGSSCSMMQQSSVQPAANCSIKSPQSCVVERPPSNQ 1647

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP---PQSKPSQPRPP 1010
              QP P    P QP        Q  P Q +P+P    QP P Q  P   PQ +P QP PP
Sbjct: 1648 QQQPPP--PPPQQP--------QPPPPQPQPAP----QPPPPQQQPQQQPQPQPQQPPPP 1693

Query: 1011 QPKSSSTNPSQAKAHHS 1027
             P       SQ   ++S
Sbjct: 1694 PPPQQQPPLSQCSMNNS 1710



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 219  DTPEDAEATVEEEVYDDPEHVGYDGEEDFENSE-----------TTEFSGEEPSYEGSET 267
            D P   E   EEE+  + E      EED  +SE           + E   +EP  E  E 
Sbjct: 1216 DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEE 1275

Query: 268  SLSLEEEQEKSIEERKKV 285
               + EEQ +S EE++++
Sbjct: 1276 KPRVSEEQRQSEEEQQEL 1293


>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 898  SFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQS----NPSTVK 953
            S+   +++  L  +S    Q     G+S   +Q  S     +   KS QS     P + +
Sbjct: 1588 SYGGLSSSSSLTQSSCVVTQQMASMGSSCSMMQQSSVQPAANCSIKSPQSCVVERPPSNQ 1647

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP---PQSKPSQPRPP 1010
              QP P    P QP        Q  P Q +P+P    QP P Q  P   PQ +P QP PP
Sbjct: 1648 QQQPPP--PPPQQP--------QPPPPQPQPAP----QPPPPQQQPQQQPQPQPQQPPPP 1693

Query: 1011 QPKSSSTNPSQAKAHHS 1027
             P       SQ   ++S
Sbjct: 1694 PPPQQQPPLSQCSMNNS 1710



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 219  DTPEDAEATVEEEVYDDPEHVGYDGEEDFENSE-----------TTEFSGEEPSYEGSET 267
            D P   E   EEE+  + E      EED  +SE           + E   +EP  E  E 
Sbjct: 1216 DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEE 1275

Query: 268  SLSLEEEQEKSIEERKKV 285
               + EEQ +S EE++++
Sbjct: 1276 KPRVSEEQRQSEEEQQEL 1293


>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 898  SFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQS----NPSTVK 953
            S+   +++  L  +S    Q     G+S   +Q  S     +   KS QS     P + +
Sbjct: 1588 SYGGLSSSSSLTQSSCVVTQQMASMGSSCSMMQQSSVQPAANCSIKSPQSCVVERPPSNQ 1647

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWP---PQSKPSQPRPP 1010
              QP P    P QP        Q  P Q +P+P    QP P Q  P   PQ +P QP PP
Sbjct: 1648 QQQPPP--PPPQQP--------QPPPPQPQPAP----QPPPPQQQPQQQPQPQPQQPPPP 1693

Query: 1011 QPKSSSTNPSQAKAHHS 1027
             P       SQ   ++S
Sbjct: 1694 PPPQQQPPLSQCSMNNS 1710



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 219  DTPEDAEATVEEEVYDDPEHVGYDGEEDFENSE-----------TTEFSGEEPSYEGSET 267
            D P   E   EEE+  + E      EED  +SE           + E   +EP  E  E 
Sbjct: 1216 DMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEE 1275

Query: 268  SLSLEEEQEKSIEERKKV 285
               + EEQ +S EE++++
Sbjct: 1276 KPRVSEEQRQSEEEQQEL 1293


>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
            sapiens]
          Length = 691

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 897  QSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQ 956
            Q    AAA   +     Q +Q  +   +    LQ+    + +  Q +  Q  PST +H Q
Sbjct: 150  QGLVAAAAAGGIMTLPLQNLQATSSLNSQLQQLQL---QLQQQQQQQQQQPPPSTNQHPQ 206

Query: 957  PKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQ-----PWPPQSKP------- 1004
            P      P  P  SQ +  Q  P Q +P P     P P+      P P Q +P       
Sbjct: 207  P-----APQAPSQSQQQPLQPTPPQ-QPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQ 260

Query: 1005 SQPRPPQPKSS-STNPSQAKAH 1025
            +QP P Q  SS    PSQ+  H
Sbjct: 261  NQPSPTQQSSSPPQKPSQSPGH 282



 Score = 38.9 bits (89), Expect = 0.025
 Identities = 36/139 (25%), Positives = 47/139 (33%), Gaps = 14/139 (10%)

Query: 900  QPAAATQKLRPASQQ---GVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNP-STVKHS 955
            Q   AT  L    QQ    +Q + Q     P      HP          Q  P       
Sbjct: 167  QNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQ 226

Query: 956  QPKPFHSVPSQPKSSQTKSCQSQP--------SQTKPSPCKSTQPKPSQPW--PPQSKPS 1005
            QP P    P  P S   ++ Q Q         +Q +PSP + +   P +P   P    PS
Sbjct: 227  QPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPS 286

Query: 1006 QPRPPQPKSSSTNPSQAKA 1024
               PP P     NP  ++A
Sbjct: 287  PLTPPNPLQLVNNPLASQA 305



 Score = 37.0 bits (84), Expect = 0.097
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 976  QSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPP-QPKSSSTNPSQAKAHHSKAGQ 1031
            Q Q  Q  PS  +  QP P  P   Q +P QP PP QP  +S  P    +   +A Q
Sbjct: 191  QQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQ 247


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 923  GASNPALQIGSHPMCKSSQFKSDQSNPSTVKHS-------QPKPFHSVPSQPKSSQTKSC 975
            G + P    GSH +       +   +P T++ +        PKP +  P  P    +   
Sbjct: 600  GQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGT 659

Query: 976  QSQPSQTKPSPCKSTQPKPSQ----PWPPQSKPSQPRPPQPKSSSTNPSQAKAH 1025
               P    P P   +   P+Q    P    S PSQ   P+  SSS +P QA  H
Sbjct: 660  SQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNH 713



 Score = 40.4 bits (93), Expect = 0.009
 Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 16/139 (11%)

Query: 888  TSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQS 947
            T H G+P  Q   P+  +   R +S              P  Q  + P+  +        
Sbjct: 679  TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ--ATPLMHTKPNSQGPP 736

Query: 948  NPSTV--KHSQPKPFHSVPSQPKSSQTKSCQSQ-PSQTKPS-----------PCKSTQPK 993
            NP  +  +H   +P H+ P  P    T     Q PS   P            P   T P+
Sbjct: 737  NPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPR 796

Query: 994  PSQPWPPQSKPSQPRPPQP 1012
            P     P+++PS P PPQP
Sbjct: 797  PRPVPKPRNRPSVPPPPQP 815



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 19/151 (12%)

Query: 894  PHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVK 953
            P P + + A       P           GG S+       HP   S +  +   +P T  
Sbjct: 624  PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTS--QHPPSLSPKPPTRSPSPPTQH 681

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQ----------TKPSPCKSTQPKPSQPWPPQSK 1003
              QP    S PSQ  + +  S    P Q          T+ +P   T+P    P  P + 
Sbjct: 682  TGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 741

Query: 1004 PS-----QP--RPPQPKSSSTNPSQAKAHHS 1027
            PS     QP   PPQ  +  + P   K + S
Sbjct: 742  PSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 772


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 923  GASNPALQIGSHPMCKSSQFKSDQSNPSTVKHS-------QPKPFHSVPSQPKSSQTKSC 975
            G + P    GSH +       +   +P T++ +        PKP +  P  P    +   
Sbjct: 522  GQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGT 581

Query: 976  QSQPSQTKPSPCKSTQPKPSQ----PWPPQSKPSQPRPPQPKSSSTNPSQAKAH 1025
               P    P P   +   P+Q    P    S PSQ   P+  SSS +P QA  H
Sbjct: 582  SQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNH 635



 Score = 40.4 bits (93), Expect = 0.009
 Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 16/139 (11%)

Query: 888  TSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQS 947
            T H G+P  Q   P+  +   R +S              P  Q  + P+  +        
Sbjct: 601  TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ--ATPLMHTKPNSQGPP 658

Query: 948  NPSTV--KHSQPKPFHSVPSQPKSSQTKSCQSQ-PSQTKPS-----------PCKSTQPK 993
            NP  +  +H   +P H+ P  P    T     Q PS   P            P   T P+
Sbjct: 659  NPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPR 718

Query: 994  PSQPWPPQSKPSQPRPPQP 1012
            P     P+++PS P PPQP
Sbjct: 719  PRPVPKPRNRPSVPPPPQP 737



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 19/151 (12%)

Query: 894  PHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVK 953
            P P + + A       P           GG S+       HP   S +  +   +P T  
Sbjct: 546  PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTS--QHPPSLSPKPPTRSPSPPTQH 603

Query: 954  HSQPKPFHSVPSQPKSSQTKSCQSQPSQ----------TKPSPCKSTQPKPSQPWPPQSK 1003
              QP    S PSQ  + +  S    P Q          T+ +P   T+P    P  P + 
Sbjct: 604  TGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 663

Query: 1004 PS-----QP--RPPQPKSSSTNPSQAKAHHS 1027
            PS     QP   PPQ  +  + P   K + S
Sbjct: 664  PSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 694


>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
          Length = 696

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 48/231 (20%)

Query: 108 MGASSNSEDAFSPGIKQPEAPEITV--FFSEKEHLDLETSEFFRDKKTSYRETALSARKN 165
           M A +N     SP    P  P+ +     SEKE  ++E  E     ++ +     S    
Sbjct: 1   MSAENNQLSGASPP-HPPTTPQYSTQNLPSEKEDTEVELDEESLQDESPFSPEGESLE-- 57

Query: 166 EKEYDTPEVTLSYSVEKVGCEVPATITYIKDGQRYEELDDSLYLGKEEYLGSVDTPEDAE 225
           +KEY   E  L    E +G E              E L +  YLGKEE+L   +  E A 
Sbjct: 58  DKEYLEEEEDLEEE-EYLGKE--------------EYLKEEEYLGKEEHLEEEEYLEKAG 102

Query: 226 ATVEEEVYDDPEHVGYDG---EEDF----ENSETTEFSG-----------EEPSYEGSET 267
              EEE  ++ E++G +G   EE++    E+ E  E+ G           EE  Y G + 
Sbjct: 103 YLEEEEYIEEEEYLGKEGYLEEEEYLGKEEHLEEEEYLGKEGYLEKEDYIEEVDYLGKKA 162

Query: 268 SLSLEE--------EQEKSIEERKKVFKDVLLCL--NMDRSRKVLPDFVKQ 308
            L  EE        E+EK++E+ + + ++  L    N+D    +   ++K+
Sbjct: 163 YLEEEEYLGKKSYLEEEKALEKEENLEEEEALEKEENLDGKENLYKKYLKE 213



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 136 EKEHLD----LETSEFFRDKKTSYRETALSARKNEKEYDTPEVTLSYSVEKVGCEVPATI 191
           E+E+L+    LE  E+  +++   +E  L     E+EY   E  L    E +G E     
Sbjct: 94  EEEYLEKAGYLEEEEYIEEEEYLGKEGYLE----EEEYLGKEEHLEEE-EYLGKE----- 143

Query: 192 TYIKDGQRYEELD---DSLYLGKEEYLGSVDTPEDAEATVEEEVYDDPEHVGYDGEEDFE 248
            Y++     EE+D      YL +EEYLG     E+ +A  +EE  ++ E +  +   D +
Sbjct: 144 GYLEKEDYIEEVDYLGKKAYLEEEEYLGKKSYLEEEKALEKEENLEEEEALEKEENLDGK 203

Query: 249 NSETTEFSGEEPSYEGSETSL 269
            +   ++  E  +   S+T L
Sbjct: 204 ENLYKKYLKEPKASYSSQTML 224


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 12/139 (8%)

Query: 896  PQSFQPAAATQKLRPASQQG---VQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            P S   AA T    PAS      +       AS   L   S P+  S+   +    P+  
Sbjct: 1820 PASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPA 1879

Query: 953  KHSQPKPFHSVPSQPKSSQTKSCQSQPSQTK---PSPCKSTQPKPSQPWPPQSKPSQPRP 1009
              S   P  + P+ P S+ T S    P+      P+P   + P P+ P P Q++    +P
Sbjct: 1880 ASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQTHKP 1939

Query: 1010 PQPKSSSTNPSQAKAHHSK 1028
             Q      NP Q  +  SK
Sbjct: 1940 VQ------NPLQTTSQSSK 1952



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 935  PMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQP--SQTKPS-PCKSTQ 991
            P   S  FK  Q        S P  F     Q K  Q +  Q Q    QT PS P  ST 
Sbjct: 657  PAVLSGYFKQFQK-------SLPPRFQRQQEQMKQQQWQQQQQQGVLPQTVPSQPSSSTV 709

Query: 992  PKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
            P P  P  P  +P QP P    S   +P
Sbjct: 710  PPP--PHRPLYQPMQPHPQHLASMGFDP 735



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 841  RSRAVASKIGHSYSLDSQPAR-AVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSF 899
            R R+V+    H+   D Q +  + G P     C    E  E   +        KP  + F
Sbjct: 921  RKRSVSHGSNHTQKPDEQRSEPSAGIPKVTSRCIDSKEPIERPEE--------KPKKEGF 972

Query: 900  QPAAATQKLRPASQQGVQMKTQGG---ASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQ 956
                +++  +P      + +T+ G   +SN   ++   P+ +S   K         +  Q
Sbjct: 973  --IRSSEGPKPEKVYKSKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQ 1030

Query: 957  PKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSS 1016
             K      ++ K ++    + + ++ K  P     P+P  P  PQS P   +P   K  S
Sbjct: 1031 RKEKEGEKAE-KVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS 1089

Query: 1017 TNPSQAKAHHSKAGQK 1032
            T  +      S+  +K
Sbjct: 1090 TETATLAQKPSQDTEK 1105


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 6/127 (4%)

Query: 905  TQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVP 964
            T + R  S    + K +   S    +  S P  K S+  S +S   +   S+ K   S+ 
Sbjct: 717  TPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSL- 775

Query: 965  SQPKSSQTKSCQSQPSQTKP--SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQA 1022
             +   S +  C  Q SQT P  S   S+QPK     PP+   S   PP PK  S  PS+ 
Sbjct: 776  -RRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPP-PKQKSKTPSR- 832

Query: 1023 KAHHSKA 1029
            ++H S +
Sbjct: 833  QSHSSSS 839



 Score = 39.3 bits (90), Expect = 0.019
 Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 38/244 (15%)

Query: 816  GRLPRPICQHVQAC--PERP-QMMGTLERSRAVASKIGHSYS------LDSQPARAVGKP 866
            GR   P+    ++   P  P Q   T ER+ + +S++G + S         QP   V   
Sbjct: 2395 GRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSA 2454

Query: 867  WPQQACTRVTELTEATGK--------------------LIRTSHIGKPHPQSFQPAAATQ 906
            +  Q+   + + T   G                     ++     G PH    +P A+T 
Sbjct: 2455 FSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTG 2514

Query: 907  KLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQ 966
              +P++   +Q   +  +S+ +    S     SS   S  S+ S+   S+     S+P Q
Sbjct: 2515 AQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGS---SLPVQ 2571

Query: 967  PKSSQTKSCQSQPSQTKPSPCKSTQP-KPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAH 1025
            P+ +  +     PS T P+P ++ +  +P +P P + K          SSS++ S + + 
Sbjct: 2572 PEVALKRV----PSPT-PAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSS 2626

Query: 1026 HSKA 1029
             S +
Sbjct: 2627 SSSS 2630



 Score = 39.3 bits (90), Expect = 0.019
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 939  SSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPW 998
            SS   S  S+ S+   S      S  S   SS + S  S PS  KP P     PKP+ P 
Sbjct: 2609 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP--QALPKPASPK 2666

Query: 999  PPQSKPSQPRPPQPKSSSTNPSQAKAH 1025
             P     + R P+    S   S++ ++
Sbjct: 2667 KPPPGERRSRSPRKPIDSLRDSRSLSY 2693



 Score = 37.7 bits (86), Expect = 0.057
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 15/145 (10%)

Query: 887  RTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSS------ 940
            R S  G   P++ +     ++ R +S    + K++  +         HP  KS       
Sbjct: 795  RRSRSGSSQPKA-KSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853

Query: 941  QFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPP 1000
               S Q+N  +V   +   F S P     S+T S  S    + P    ST        PP
Sbjct: 854  SITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSST--------PP 905

Query: 1001 QSKPSQPRPPQPKSSSTNPSQAKAH 1025
            +  PS+   PQPK  +    + ++H
Sbjct: 906  RQSPSRSSSPQPKVKAIISPRQRSH 930



 Score = 34.3 bits (77), Expect = 0.63
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 18/170 (10%)

Query: 868  PQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNP 927
            P+ A  + +   E   K  +     +P P    P  ++    P +   +  +  GG+  P
Sbjct: 324  PETATKQPSSPYEDKDKDKKEKSATRPSPS---PERSSTGPEPPAPTPLLAERHGGSPQP 380

Query: 928  ALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987
               + + P+ +       +++P T   S PK   S    P+SS ++S    P  TK S  
Sbjct: 381  ---LATTPLSQEPVNPPSEASP-TRDRSPPK---SPEKLPQSSSSESSPPSPQPTKVSRH 433

Query: 988  KSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQKRGGKH 1037
             S+ P        +S    P P   +  S++P+     H +A + +   H
Sbjct: 434  ASSSP--------ESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSH 475



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 944  SDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC---KSTQPKPSQPWP- 999
            S+    ST + S P+     PS P   + K  + + S T+PSP     ST P+P  P P 
Sbjct: 311  SEPGTTSTQRPSSPETATKQPSSPYEDKDKD-KKEKSATRPSPSPERSSTGPEPPAPTPL 369

Query: 1000 -PQSKPSQPRP----PQPKSSSTNPSQAKAHHSKAGQK 1032
              +     P+P    P  +     PS+A     ++  K
Sbjct: 370  LAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPK 407



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 3/113 (2%)

Query: 924  ASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQ-TKSCQSQPSQT 982
            A+ P  Q   +P  ++S  +      S  K  Q     S P  P+ ++ ++   S P   
Sbjct: 382  ATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESP 441

Query: 983  KPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAH-HSKAGQKRG 1034
            KP+P   +  + S   P     S  R  + KS S  PS+      S A  KRG
Sbjct: 442  KPAPAPGSHREISSS-PTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRG 493



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 894  PHPQSFQPAAATQKLRP-ASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            P P++  P A  ++ R  +S +G     +G +S  +     HP    +  +  +S+P   
Sbjct: 1622 PEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSP--EHPPKSRTARRGSRSSP--- 1676

Query: 953  KHSQPKPFHSVPSQPKSSQTKSCQSQPSQ-TKPSPCKSTQPKPSQPWPPQSK----PSQP 1007
               +PK     P + +SS++    ++ ++ ++ S   S+ P+     PP+ +     S P
Sbjct: 1677 ---EPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSP 1733

Query: 1008 RPPQPKSSSTNPSQAKAHHSKAGQKRG 1034
             P +   SS     A +  +K   +RG
Sbjct: 1734 EPAEKSRSSRRRRSASSPRTKTTSRRG 1760



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 8/132 (6%)

Query: 905  TQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVP 964
            T + R  S    +MK    +S  +  + S      S+ KS  S   ++  S P P     
Sbjct: 736  TSQRRSRSNSSPEMKKSRISSRRSRSLSS----PRSKAKSRLSLRRSLSGSSPCPKQKSQ 791

Query: 965  SQPKSSQTKSCQSQP-SQTKPSPCKSTQ---PKPSQPWPPQSKPSQPRPPQPKSSSTNPS 1020
            + P+ S++ S Q +  S+T P   +S+    PK     P +   S   P     S T P 
Sbjct: 792  TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPR 851

Query: 1021 QAKAHHSKAGQK 1032
            Q      +A ++
Sbjct: 852  QGSITSPQANEQ 863


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 946  QSNPSTVKHSQPKPFHSV-PSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKP 1004
            Q +PS    S+ +P     PS PK S  KS  ++PS T PS      P+P  P P Q K 
Sbjct: 2162 QESPSLSALSEAQPSSPARPSAPKPSTPKS--AEPSATTPSDA----PQPPAPQPAQDKA 2215

Query: 1005 SQPRPPQPKSSSTNP 1019
             +PRP   ++S   P
Sbjct: 2216 PEPRPEPVRASKPAP 2230



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 17/164 (10%)

Query: 858  QPARAVGKPWPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQ 917
            QP    G PW     ++  E   A G +     + +    S      T++  PAS   ++
Sbjct: 438  QPKSERGAPWGTPGASQ--EELRAPGSVAERRRLFQQKAASLDER--TRQRSPASDLELR 493

Query: 918  MKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQS 977
               + G    +           S   + Q  PS  +  +P P  S PS PK+S+  S   
Sbjct: 494  FAQELGRIRRSTSREELVRSHESLRATLQRAPSPREPGEP-PLFSRPSTPKTSRAVS--- 549

Query: 978  QPSQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQ 1021
                    P  +  P PS    P  +P +PR   P +  T P +
Sbjct: 550  --------PAAAQPPSPSSAEKPGDEPGRPRSRGP-AGRTEPGE 584


>gi|61175248 spermidine/spermine N1-acetyl transferase-like 1 [Homo
            sapiens]
          Length = 445

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 49/172 (28%), Positives = 65/172 (37%), Gaps = 32/172 (18%)

Query: 867  WPQQACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASN 926
            WPQ     V  L+EA+        I +P P    P+ +  +    SQ G     Q G S 
Sbjct: 145  WPQSLSELV--LSEAS--------ISQPGPPQRAPSQSGPRQSSTSQAGTN---QSGISQ 191

Query: 927  PAL-------QIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQP 979
            P +         GS P  +  Q  + QS  S +  SQP  + +  SQP           P
Sbjct: 192  PVMWQLDMRQSGGSQPSMR--QVGTSQSGTSQIGMSQPGTWQTGLSQPV----------P 239

Query: 980  SQTKPSPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQ 1031
             Q   SP    Q    QP   Q  PSQ    QP +S ++ +Q    H   GQ
Sbjct: 240  RQPNKSPPGMWQRGMWQPGMSQQVPSQLGMRQPGTSQSSKNQTGMSHPGRGQ 291



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQ---TKSCQSQPSQTKPSPCKSTQPKPSQPWPPQS 1002
            Q  PS    SQP     VPSQP   Q   ++SC++Q   ++P   +S+    +Q    Q 
Sbjct: 18   QQVPSHPDMSQPGMSQQVPSQPGIRQPDTSQSCKNQTDMSQPDANQSSLSDSNQTGIIQP 77

Query: 1003 KPS 1005
             PS
Sbjct: 78   SPS 80


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +S P+T K   P    S P+ PK     + +     T   P  +T  KP+   P +  P+
Sbjct: 394  KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 453

Query: 1006 QPRPPQP----KSSSTNPSQ 1021
             P+ P P    K + T P +
Sbjct: 454  TPKEPAPTTTKKPAPTTPKE 473



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            +P P + +PA  T K  PA     +         PA      P   +++    + +P+T 
Sbjct: 332  EPAPTTKEPAPTTPK-EPAPT-APKKPAPTTPKEPAPTTPKEPAPTTTK----EPSPTTP 385

Query: 953  KHSQPKPFHSVPS---QPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQP-WPPQSKPSQPR 1008
            K   P    S P+   +P  + TKS  + P +  PSP  + +P P+ P  P  + P +P 
Sbjct: 386  KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE--PSPTTTKEPAPTTPKEPAPTTPKKPA 443

Query: 1009 PPQPKS-SSTNPSQ 1021
            P  PK  + T P +
Sbjct: 444  PTTPKEPAPTTPKE 457



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 24/181 (13%)

Query: 860  ARAVGKPWPQQ-------ACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPAS 912
            ++ + KP P+        A T   E T  T K   ++   +P P + + A  T K  PA 
Sbjct: 191  SKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK-EPAP 249

Query: 913  QQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQT 972
                   T      PA      P   + +    +  P+T K   P    S P+ PK    
Sbjct: 250  TTTKSAPTT--PKEPAPTTTKEPAPTTPK----EPAPTTTKEPAPTTTKSAPTTPK---- 299

Query: 973  KSCQSQPSQTKP-SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQ 1031
                 +P+ T P  P  +T  +P+   P +  P+ P+ P P +    P+  K     A +
Sbjct: 300  -----EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 354

Query: 1032 K 1032
            K
Sbjct: 355  K 355



 Score = 36.6 bits (83), Expect = 0.13
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +  P+T K   P      P+ PK     + +     T   P  +T  +P+     +  P+
Sbjct: 324  EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT 383

Query: 1006 QPRPPQPKSSSTNPSQAK 1023
             P+ P P ++ + P+  K
Sbjct: 384  TPKEPAPTTTKSAPTTTK 401



 Score = 34.7 bits (78), Expect = 0.48
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 938  KSSQFKSDQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQ 996
            KS+     + +P+T K   P  P    P+ PK     + +     T   P  +T  KP+ 
Sbjct: 409  KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 468

Query: 997  PWPPQSKPSQPRPPQP----KSSSTNPSQ 1021
              P +  P+ P+   P    K + T P +
Sbjct: 469  TTPKEPAPTTPKETAPTTPKKLTPTTPEK 497



 Score = 34.3 bits (77), Expect = 0.63
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 938  KSSQFKSDQSNPST-VKHSQPKPFHSVPSQPKSSQTK-----SCQSQPSQTKPSPCKSTQ 991
            K++  K  QS   T  K   P         PK+  T      +   +P+ T P    ST 
Sbjct: 169  KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 228

Query: 992  PKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAK 1023
            PK   P   +S P+ P+ P P ++ + P+  K
Sbjct: 229  PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 260



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 877  ELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPM 936
            EL   T K   ++   KP P + +  A T    PA        T      P    G+ P 
Sbjct: 598  ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP-------TTPKEPAPTTPKGTAPT 650

Query: 937  CKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPK-PS 995
                     +  P+T K   PK     P+  K   T +   +P+ T P     T PK P+
Sbjct: 651  TLK------EPAPTTPKKPAPKEL--APTTTK-GPTSTTSDKPAPTTPKETAPTTPKEPA 701

Query: 996  QPWPPQSKPSQPRPPQPKSSSTN 1018
               P +  P+ P  P P +S  +
Sbjct: 702  PTTPKKPAPTTPETPPPTTSEVS 724



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 949  PSTVKHSQPKPFHSVPSQPKS-SQTKSCQSQPSQTK-PSPCKSTQPKPSQPWPP-----Q 1001
            P+T + +   P    P+ PK  + T   +  P+  K P+P  + +P P+ P  P     +
Sbjct: 335  PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 394

Query: 1002 SKPSQPRPPQPKSSSTNPSQAK 1023
            S P+  + P P ++ + P+  K
Sbjct: 395  SAPTTTKEPAPTTTKSAPTTPK 416



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            KP P+   P    +       +      +G A     +       + +      + P+T+
Sbjct: 593  KPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 652

Query: 953  KHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK-PSQPRPP 1010
            K   P  P    P +   + TK   S  S  KP+P   T PK + P  P+   P+ P+ P
Sbjct: 653  KEPAPTTPKKPAPKELAPTTTKGPTSTTSD-KPAP---TTPKETAPTTPKEPAPTTPKKP 708

Query: 1011 QPKSSSTNP 1019
             P +  T P
Sbjct: 709  APTTPETPP 717



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPK--SSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ-SKP 1004
            P+T K   P  P  + P+ PK  +  T    +  +  KP+P    +  P+ P  P  + P
Sbjct: 468  PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTP 527

Query: 1005 SQPRPPQPKSSSTNPSQAKA 1024
             +P P  PK+++ N  +  A
Sbjct: 528  EEPAPTTPKAAAPNTPKEPA 547



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 949  PSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPR 1008
            P+T K   PK     P+  K   + +C  +P+ T P     T PK     P  + P +P 
Sbjct: 588  PTTPKKPAPKEL--APTTTKEPTSTTC-DKPAPTTPKGTAPTTPKE----PAPTTPKEPA 640

Query: 1009 PPQPKSSS 1016
            P  PK ++
Sbjct: 641  PTTPKGTA 648



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQP 1007
            P+T K   P  P    P+ PK +   + +     T      +T  KP+   P +  P+ P
Sbjct: 460  PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 519

Query: 1008 RPPQP----KSSSTNPSQAKAHHSK 1028
              P P    + + T P  A  +  K
Sbjct: 520  EEPTPTTPEEPAPTTPKAAAPNTPK 544



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ----SK 1003
            P+T +   P  P    P+ P+   T +   +P+ T P       PK   P  P+    + 
Sbjct: 500  PTTPEKPAPTTPEELAPTTPEEP-TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 558

Query: 1004 PSQPRPPQPKSSSTNPSQAKA 1024
            P +P P  PK ++    +  A
Sbjct: 559  PKEPAPTTPKETAPTTPKGTA 579



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 11/79 (13%)

Query: 945  DQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPP--- 1000
            ++  P+T +   P  P  + P+ PK     +   +P+ T P     T PK + P  P   
Sbjct: 520  EEPTPTTPEEPAPTTPKAAAPNTPKEP-APTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 578

Query: 1001 ------QSKPSQPRPPQPK 1013
                  +  P+ P+ P PK
Sbjct: 579  APTTLKEPAPTTPKKPAPK 597


>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
          Length = 1311

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +S P+T K   P    S P+ PK     + +     T   P  +T  KP+   P +  P+
Sbjct: 435  KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 494

Query: 1006 QPRPPQP----KSSSTNPSQ 1021
             P+ P P    K + T P +
Sbjct: 495  TPKEPAPTTTKKPAPTTPKE 514



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            +P P + +PA  T K  PA     +         PA      P   +++    + +P+T 
Sbjct: 373  EPAPTTKEPAPTTPK-EPAPT-APKKPAPTTPKEPAPTTPKEPAPTTTK----EPSPTTP 426

Query: 953  KHSQPKPFHSVPS---QPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQP-WPPQSKPSQPR 1008
            K   P    S P+   +P  + TKS  + P +  PSP  + +P P+ P  P  + P +P 
Sbjct: 427  KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE--PSPTTTKEPAPTTPKEPAPTTPKKPA 484

Query: 1009 PPQPKS-SSTNPSQ 1021
            P  PK  + T P +
Sbjct: 485  PTTPKEPAPTTPKE 498



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 24/181 (13%)

Query: 860  ARAVGKPWPQQ-------ACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPAS 912
            ++ + KP P+        A T   E T  T K   ++   +P P + + A  T K  PA 
Sbjct: 232  SKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK-EPAP 290

Query: 913  QQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQT 972
                   T      PA      P   + +    +  P+T K   P    S P+ PK    
Sbjct: 291  TTTKSAPTT--PKEPAPTTTKEPAPTTPK----EPAPTTTKEPAPTTTKSAPTTPK---- 340

Query: 973  KSCQSQPSQTKP-SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQ 1031
                 +P+ T P  P  +T  +P+   P +  P+ P+ P P +    P+  K     A +
Sbjct: 341  -----EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 395

Query: 1032 K 1032
            K
Sbjct: 396  K 396



 Score = 36.6 bits (83), Expect = 0.13
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +  P+T K   P      P+ PK     + +     T   P  +T  +P+     +  P+
Sbjct: 365  EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT 424

Query: 1006 QPRPPQPKSSSTNPSQAK 1023
             P+ P P ++ + P+  K
Sbjct: 425  TPKEPAPTTTKSAPTTTK 442



 Score = 34.7 bits (78), Expect = 0.48
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 938  KSSQFKSDQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQ 996
            KS+     + +P+T K   P  P    P+ PK     + +     T   P  +T  KP+ 
Sbjct: 450  KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 509

Query: 997  PWPPQSKPSQPRPPQP----KSSSTNPSQ 1021
              P +  P+ P+   P    K + T P +
Sbjct: 510  TTPKEPAPTTPKETAPTTPKKLTPTTPEK 538



 Score = 34.3 bits (77), Expect = 0.63
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 938  KSSQFKSDQSNPST-VKHSQPKPFHSVPSQPKSSQTK-----SCQSQPSQTKPSPCKSTQ 991
            K++  K  QS   T  K   P         PK+  T      +   +P+ T P    ST 
Sbjct: 210  KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 269

Query: 992  PKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAK 1023
            PK   P   +S P+ P+ P P ++ + P+  K
Sbjct: 270  PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 301



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 877  ELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPM 936
            EL   T K   ++   KP P + +  A T    PA        T      P    G+ P 
Sbjct: 639  ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP-------TTPKEPAPTTPKGTAPT 691

Query: 937  CKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPK-PS 995
                     +  P+T K   PK     P+  K   T +   +P+ T P     T PK P+
Sbjct: 692  TLK------EPAPTTPKKPAPKEL--APTTTK-GPTSTTSDKPAPTTPKETAPTTPKEPA 742

Query: 996  QPWPPQSKPSQPRPPQPKSSSTN 1018
               P +  P+ P  P P +S  +
Sbjct: 743  PTTPKKPAPTTPETPPPTTSEVS 765



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 949  PSTVKHSQPKPFHSVPSQPKS-SQTKSCQSQPSQTK-PSPCKSTQPKPSQPWPP-----Q 1001
            P+T + +   P    P+ PK  + T   +  P+  K P+P  + +P P+ P  P     +
Sbjct: 376  PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 435

Query: 1002 SKPSQPRPPQPKSSSTNPSQAK 1023
            S P+  + P P ++ + P+  K
Sbjct: 436  SAPTTTKEPAPTTTKSAPTTPK 457



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            KP P+   P    +       +      +G A     +       + +      + P+T+
Sbjct: 634  KPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 693

Query: 953  KHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK-PSQPRPP 1010
            K   P  P    P +   + TK   S  S  KP+P   T PK + P  P+   P+ P+ P
Sbjct: 694  KEPAPTTPKKPAPKELAPTTTKGPTSTTSD-KPAP---TTPKETAPTTPKEPAPTTPKKP 749

Query: 1011 QPKSSSTNP 1019
             P +  T P
Sbjct: 750  APTTPETPP 758



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPK--SSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ-SKP 1004
            P+T K   P  P  + P+ PK  +  T    +  +  KP+P    +  P+ P  P  + P
Sbjct: 509  PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTP 568

Query: 1005 SQPRPPQPKSSSTNPSQAKA 1024
             +P P  PK+++ N  +  A
Sbjct: 569  EEPAPTTPKAAAPNTPKEPA 588



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 949  PSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPR 1008
            P+T K   PK     P+  K   + +C  +P+ T P     T PK     P  + P +P 
Sbjct: 629  PTTPKKPAPKEL--APTTTKEPTSTTC-DKPAPTTPKGTAPTTPKE----PAPTTPKEPA 681

Query: 1009 PPQPKSSS 1016
            P  PK ++
Sbjct: 682  PTTPKGTA 689



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQP 1007
            P+T K   P  P    P+ PK +   + +     T      +T  KP+   P +  P+ P
Sbjct: 501  PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 560

Query: 1008 RPPQP----KSSSTNPSQAKAHHSK 1028
              P P    + + T P  A  +  K
Sbjct: 561  EEPTPTTPEEPAPTTPKAAAPNTPK 585



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ----SK 1003
            P+T +   P  P    P+ P+   T +   +P+ T P       PK   P  P+    + 
Sbjct: 541  PTTPEKPAPTTPEELAPTTPEEP-TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 599

Query: 1004 PSQPRPPQPKSSSTNPSQAKA 1024
            P +P P  PK ++    +  A
Sbjct: 600  PKEPAPTTPKETAPTTPKGTA 620



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 11/79 (13%)

Query: 945  DQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPP--- 1000
            ++  P+T +   P  P  + P+ PK     +   +P+ T P     T PK + P  P   
Sbjct: 561  EEPTPTTPEEPAPTTPKAAAPNTPKEP-APTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 619

Query: 1001 ------QSKPSQPRPPQPK 1013
                  +  P+ P+ P PK
Sbjct: 620  APTTLKEPAPTTPKKPAPK 638


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +S P+T K   P    S P+ PK     + +     T   P  +T  KP+   P +  P+
Sbjct: 487  KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 546

Query: 1006 QPRPPQP----KSSSTNPSQ 1021
             P+ P P    K + T P +
Sbjct: 547  TPKEPAPTTTKKPAPTTPKE 566



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            +P P + +PA  T K  PA     +         PA      P   +++    + +P+T 
Sbjct: 425  EPAPTTKEPAPTTPK-EPAPT-APKKPAPTTPKEPAPTTPKEPAPTTTK----EPSPTTP 478

Query: 953  KHSQPKPFHSVPS---QPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQP-WPPQSKPSQPR 1008
            K   P    S P+   +P  + TKS  + P +  PSP  + +P P+ P  P  + P +P 
Sbjct: 479  KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE--PSPTTTKEPAPTTPKEPAPTTPKKPA 536

Query: 1009 PPQPKS-SSTNPSQ 1021
            P  PK  + T P +
Sbjct: 537  PTTPKEPAPTTPKE 550



 Score = 40.0 bits (92), Expect = 0.011
 Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 24/181 (13%)

Query: 860  ARAVGKPWPQQ-------ACTRVTELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPAS 912
            ++ + KP P+        A T   E T  T K   ++   +P P + + A  T K  PA 
Sbjct: 284  SKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK-EPAP 342

Query: 913  QQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQT 972
                   T      PA      P   + +    +  P+T K   P    S P+ PK    
Sbjct: 343  TTTKSAPTT--PKEPAPTTTKEPAPTTPK----EPAPTTTKEPAPTTTKSAPTTPK---- 392

Query: 973  KSCQSQPSQTKP-SPCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAKAHHSKAGQ 1031
                 +P+ T P  P  +T  +P+   P +  P+ P+ P P +    P+  K     A +
Sbjct: 393  -----EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 447

Query: 1032 K 1032
            K
Sbjct: 448  K 448



 Score = 36.6 bits (83), Expect = 0.13
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 946  QSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS 1005
            +  P+T K   P      P+ PK     + +     T   P  +T  +P+     +  P+
Sbjct: 417  EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT 476

Query: 1006 QPRPPQPKSSSTNPSQAK 1023
             P+ P P ++ + P+  K
Sbjct: 477  TPKEPAPTTTKSAPTTTK 494



 Score = 34.7 bits (78), Expect = 0.48
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 938  KSSQFKSDQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQ 996
            KS+     + +P+T K   P  P    P+ PK     + +     T   P  +T  KP+ 
Sbjct: 502  KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 561

Query: 997  PWPPQSKPSQPRPPQP----KSSSTNPSQ 1021
              P +  P+ P+   P    K + T P +
Sbjct: 562  TTPKEPAPTTPKETAPTTPKKLTPTTPEK 590



 Score = 34.3 bits (77), Expect = 0.63
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 938  KSSQFKSDQSNPST-VKHSQPKPFHSVPSQPKSSQTK-----SCQSQPSQTKPSPCKSTQ 991
            K++  K  QS   T  K   P         PK+  T      +   +P+ T P    ST 
Sbjct: 262  KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 321

Query: 992  PKPSQPWPPQSKPSQPRPPQPKSSSTNPSQAK 1023
            PK   P   +S P+ P+ P P ++ + P+  K
Sbjct: 322  PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 353



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 877  ELTEATGKLIRTSHIGKPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPM 936
            EL   T K   ++   KP P + +  A T    PA        T      P    G+ P 
Sbjct: 691  ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP-------TTPKEPAPTTPKGTAPT 743

Query: 937  CKSSQFKSDQSNPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPK-PS 995
                     +  P+T K   PK     P+  K   T +   +P+ T P     T PK P+
Sbjct: 744  TLK------EPAPTTPKKPAPKEL--APTTTK-GPTSTTSDKPAPTTPKETAPTTPKEPA 794

Query: 996  QPWPPQSKPSQPRPPQPKSSSTN 1018
               P +  P+ P  P P +S  +
Sbjct: 795  PTTPKKPAPTTPETPPPTTSEVS 817



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 949  PSTVKHSQPKPFHSVPSQPKS-SQTKSCQSQPSQTK-PSPCKSTQPKPSQPWPP-----Q 1001
            P+T + +   P    P+ PK  + T   +  P+  K P+P  + +P P+ P  P     +
Sbjct: 428  PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 487

Query: 1002 SKPSQPRPPQPKSSSTNPSQAK 1023
            S P+  + P P ++ + P+  K
Sbjct: 488  SAPTTTKEPAPTTTKSAPTTPK 509



 Score = 33.5 bits (75), Expect = 1.1
 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 893  KPHPQSFQPAAATQKLRPASQQGVQMKTQGGASNPALQIGSHPMCKSSQFKSDQSNPSTV 952
            KP P+   P    +       +      +G A     +       + +      + P+T+
Sbjct: 686  KPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 745

Query: 953  KHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSK-PSQPRPP 1010
            K   P  P    P +   + TK   S  S  KP+P   T PK + P  P+   P+ P+ P
Sbjct: 746  KEPAPTTPKKPAPKELAPTTTKGPTSTTSD-KPAP---TTPKETAPTTPKEPAPTTPKKP 801

Query: 1011 QPKSSSTNP 1019
             P +  T P
Sbjct: 802  APTTPETPP 810



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPK--SSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ-SKP 1004
            P+T K   P  P  + P+ PK  +  T    +  +  KP+P    +  P+ P  P  + P
Sbjct: 561  PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTP 620

Query: 1005 SQPRPPQPKSSSTNPSQAKA 1024
             +P P  PK+++ N  +  A
Sbjct: 621  EEPAPTTPKAAAPNTPKEPA 640



 Score = 32.0 bits (71), Expect = 3.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 949  PSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQPR 1008
            P+T K   PK     P+  K   + +C  +P+ T P     T PK     P  + P +P 
Sbjct: 681  PTTPKKPAPKEL--APTTTKEPTSTTC-DKPAPTTPKGTAPTTPKE----PAPTTPKEPA 733

Query: 1009 PPQPKSSS 1016
            P  PK ++
Sbjct: 734  PTTPKGTA 741



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPSQP 1007
            P+T K   P  P    P+ PK +   + +     T      +T  KP+   P +  P+ P
Sbjct: 553  PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTP 612

Query: 1008 RPPQP----KSSSTNPSQAKAHHSK 1028
              P P    + + T P  A  +  K
Sbjct: 613  EEPTPTTPEEPAPTTPKAAAPNTPK 637



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 949  PSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQ----SK 1003
            P+T +   P  P    P+ P+   T +   +P+ T P       PK   P  P+    + 
Sbjct: 593  PTTPEKPAPTTPEELAPTTPEEP-TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 651

Query: 1004 PSQPRPPQPKSSSTNPSQAKA 1024
            P +P P  PK ++    +  A
Sbjct: 652  PKEPAPTTPKETAPTTPKGTA 672



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 11/79 (13%)

Query: 945  DQSNPSTVKHSQPK-PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPP--- 1000
            ++  P+T +   P  P  + P+ PK     +   +P+ T P     T PK + P  P   
Sbjct: 613  EEPTPTTPEEPAPTTPKAAAPNTPKEP-APTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 671

Query: 1001 ------QSKPSQPRPPQPK 1013
                  +  P+ P+ P PK
Sbjct: 672  APTTLKEPAPTTPKKPAPK 690


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,090,877
Number of Sequences: 37866
Number of extensions: 2239976
Number of successful extensions: 21882
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 651
Number of HSP's that attempted gapping in prelim test: 14908
Number of HSP's gapped (non-prelim): 5080
length of query: 1037
length of database: 18,247,518
effective HSP length: 112
effective length of query: 925
effective length of database: 14,006,526
effective search space: 12956036550
effective search space used: 12956036550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.