USP28 6781

Name: USP28	Sequence: fasta or formatted (1077aa)		NCBI GI: 16507200
Description: ubiquitin specific protease 28		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 73 2 C cysteine 1.9 20 1 D aspartate 5.2 56 2 E glutamate 9.6 103 3 F phenylalanine 3.2 34 2 G glycine 3.9 42 2 H histidine 2.1 23 1 I isoleucine 4.5 48 2 K lysine 5.6 60 2 L leucine 9.7 105 2 M methionine 2.6 28 2 N asparagine 4.5 48 2 P proline 4.8 52 2 Q glutamine 5.7 61 3 R arginine 5.1 55 2 S serine 9.5 102 3 T threonine 4.5 48 2 V valine 6.0 65 2 W tryptophan 1.3 14 1 Y tyrosine 3.7 40 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 28 USP25 0.455 ubiquitin specific peptidase 25 USP48 0.028 ubiquitin specific protease 48 isoform b USP48 0.028 ubiquitin specific protease 48 isoform a USP34 0.019 ubiquitin specific protease 34 USP9X 0.017 ubiquitin specific protease 9, X-linked isoform 4 [... USP9X 0.017 ubiquitin specific protease 9, X-linked isoform 3 [... USP37 0.016 ubiquitin specific peptidase 37 USP40 0.015 ubiquitin thioesterase 40 USP38 0.015 ubiquitin specific peptidase 38 USP7 0.015 ubiquitin specific peptidase 7 USP9Y 0.015 ubiquitin specific protease 9, Y-linked USP24 0.015 ubiquitin specific protease 24 USP47 0.014 ubiquitin specific protease 47 USP35 0.014 ubiquitin specific protease 35 USP46 0.012 ubiquitin specific peptidase 46 isoform 2 USP46 0.012 ubiquitin specific peptidase 46 isoform 1 USP3 0.012 ubiquitin thiolesterase 3 USP18 0.011 ubiquitin specific protease 18 USP16 0.010 ubiquitin specific protease 16 isoform b USP41 0.010 PREDICTED: ubiquitin specific protease 41 USP36 0.010 ubiquitin specific peptidase 36 USP33 0.010 ubiquitin specific protease 33 isoform 3 USP33 0.010 ubiquitin specific protease 33 isoform 1 USP33 0.010 ubiquitin specific protease 33 isoform 2 USP26 0.010 ubiquitin-specific protease 26 USP32 0.010 ubiquitin specific protease 32 USP41 0.009 PREDICTED: ubiquitin specific peptidase 41 USP6 0.009 ubiquitin specific protease 6 USP29 0.009 ubiquitin specific peptidase 29 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.