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Search of human proteins with 164664518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
(483 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 963 0.0
gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 277 2e-74
gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 276 2e-74
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 273 3e-73
gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi... 245 7e-65
gi|4758112 HLA-B associated transcript 1 [Homo sapiens] 244 1e-64
gi|18375623 HLA-B associated transcript 1 [Homo sapiens] 244 1e-64
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi... 225 8e-59
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 215 8e-56
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap... 211 1e-54
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 205 8e-53
gi|8922886 DDX19-like protein [Homo sapiens] 204 2e-52
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H... 203 3e-52
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 196 3e-50
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 195 7e-50
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi... 195 7e-50
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap... 193 3e-49
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 193 3e-49
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... 193 3e-49
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [... 189 6e-48
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 185 9e-47
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 185 9e-47
gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapi... 185 9e-47
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... 183 3e-46
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... 183 3e-46
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ... 183 3e-46
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi... 181 1e-45
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 181 1e-45
gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapi... 181 2e-45
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 180 2e-45
>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
Length = 483
Score = 963 bits (2489), Expect = 0.0
Identities = 483/483 (100%), Positives = 483/483 (100%)
Query: 1 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ 60
MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
Sbjct: 1 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ 60
Query: 61 SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS 120
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
Sbjct: 61 SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS 120
Query: 121 PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV 180
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
Sbjct: 121 PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV 180
Query: 181 SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV 240
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
Sbjct: 181 SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV 240
Query: 241 QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL 300
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
Sbjct: 241 QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL 300
Query: 301 MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS 360
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
Sbjct: 301 MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS 360
Query: 361 CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH 420
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
Sbjct: 361 CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH 420
Query: 421 RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED 480
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
Sbjct: 421 RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED 480
Query: 481 EKP 483
EKP
Sbjct: 481 EKP 483
>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
[Homo sapiens]
Length = 406
Score = 277 bits (708), Expect = 2e-74
Identities = 144/372 (38%), Positives = 232/372 (62%), Gaps = 4/372 (1%)
Query: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
+ F+D L LL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L
Sbjct: 32 DSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISIL 91
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD-D 214
++++L QA+V+ PTRELA Q+ ++ + + +MG A A GGTN+R ++ +L +
Sbjct: 92 QQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG-ASCHACIGGTNVRAEVQKLQME 150
Query: 215 TVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQIL 274
H+++ TPGR+ D++ + +++M VLDEAD++LS+ F + DI L N Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 275 LYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRL 332
L SAT P V + ++ P I + EELTL+G+ Q+Y V E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 333 QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
I Q++IF N+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQ 452
L RGID+Q V++VIN+D P E Y+HRIGR GRFG G+AIN++T +D+ L+ IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 453 LGTEIKPIPSNI 464
T I+ +P N+
Sbjct: 391 YNTSIEEMPLNV 402
>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
[Homo sapiens]
Length = 411
Score = 276 bits (707), Expect = 2e-74
Identities = 143/378 (37%), Positives = 237/378 (62%), Gaps = 7/378 (1%)
Query: 89 DVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSG 148
DVT T F+ L+ +LL GI+ G+EKPS IQ+ +I + GRD++A++++GTGK+
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 149 AYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD 208
+ I +L+ LD++ QA+++ PTRELA+Q+ + + + +M + A GGTN+ +D
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGED 149
Query: 209 IMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP 268
I +LD HVV TPGR+ D+I++ + ++M+VLDEAD++L++ F + + D+ LP
Sbjct: 150 IRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP 209
Query: 269 KNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLN 326
Q++L SAT P + + N + P I + +ELTL+G+ Q++ V E K L
Sbjct: 210 PATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 269
Query: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386
L+ L I Q++IFCN+ ++V+ L +K+ + ++ +H M Q+ R + +FR+G R
Sbjct: 270 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASR 329
Query: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNL 446
L+ TD++ RG+D+ V+++IN+D P E Y+HRIGRSGR+G G+AIN + DD L
Sbjct: 330 VLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRIL 389
Query: 447 KSIEEQLGTEIKPIPSNI 464
+ IE+ T+I +P N+
Sbjct: 390 RDIEQYYSTQIDEMPMNV 407
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 273 bits (698), Expect = 3e-73
Identities = 143/372 (38%), Positives = 233/372 (62%), Gaps = 4/372 (1%)
Query: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155
+ F+D LK LL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD-D 214
++L+++ QA+V+ PTRELA Q+ ++ + + +MG A A GGTN+R+++ +L +
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMG-ATCHACIGGTNVRNEMQKLQAE 151
Query: 215 TVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQIL 274
H+V+ TPGR+ D++ + ++M VLDEAD++LS+ F + +I L + Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 275 LYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRL 332
L SAT P V + ++ P I + EELTL+G+ Q+Y V E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 333 QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
I Q++IF N+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQ 452
L RGID+Q V++VIN+D P E Y+HRIGR GRFG G+AIN +T +D+ L+ IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 453 LGTEIKPIPSNI 464
T ++ +P N+
Sbjct: 392 YNTTVEEMPMNV 403
>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
sapiens]
Length = 427
Score = 245 bits (625), Expect = 7e-65
Identities = 141/399 (35%), Positives = 227/399 (56%), Gaps = 8/399 (2%)
Query: 79 PPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILA 138
P KD++ S + F D+ LK ELL I + G+E PS +Q E IP A+ G D+L
Sbjct: 30 PKKDIK---GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 139 RAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMA 198
+AK+G GK+ +++ L++++ + +V+ TRELA Q+S+ + SK+M KV
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
Query: 199 TTGGTNLR-DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DF 256
GG +++ D+ + + HVV+ TPGRIL L++ + +V+ VLDE DK+L Q D
Sbjct: 147 FFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDM 206
Query: 257 VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYA 314
+ +++I P +Q +++SAT ++ +Q P E+ + +E LTL G+ QYY
Sbjct: 207 RRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV 266
Query: 315 YVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRN 374
+ + +K L L L+ NQ IIF S QR LA+ + + + IH M QE R
Sbjct: 267 KLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 375 RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 434
+ F++ R LV T+LF RG+DI+ VN+V N+D P+ ++TYLHR+ R+GRFG GLA
Sbjct: 327 SRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA 386
Query: 435 INLIT-YDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAE 472
I ++ +D L ++++ + +P ID S Y+ +
Sbjct: 387 ITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 244 bits (624), Expect = 1e-64
Identities = 145/429 (33%), Positives = 234/429 (54%), Gaps = 11/429 (2%)
Query: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
N ++N T GD + K KD++ S + F D+ LK ELL
Sbjct: 4 NDVDNELLDYEDDEVETAAGGDGAEAPAK---KDVK---GSYVSIHSSGFRDFLLKPELL 57
Query: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
I + G+E PS +Q E IP A+ G D+L +AK+G GK+ +++ L++L+ + +
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR-DDIMRLDDTVHVVIATPGRIL 227
V+ TRELA Q+S+ + SK+M KV GG +++ D+ + + H+V+ TPGRIL
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 228 DLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSATFPLSVQK 286
L + + H++ +LDE DK+L Q D + +++I P +Q++++SAT ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 287 FMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSS 344
+Q P EI + +E LTL G+ QYY + + +K L L L+ NQ +IF S
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSV 297
Query: 345 QRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 404
QR LA+ + + + IH M QE R + F++ R LV T+LF RG+DI+ VN
Sbjct: 298 QRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVN 357
Query: 405 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTEIKPIPSN 463
+ N+D P+ ++TYLHR+ R+GRFG GLAI ++ +D L ++++ I +P
Sbjct: 358 IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDE 417
Query: 464 IDKSLYVAE 472
ID S Y+ +
Sbjct: 418 IDISSYIEQ 426
>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 244 bits (624), Expect = 1e-64
Identities = 145/429 (33%), Positives = 234/429 (54%), Gaps = 11/429 (2%)
Query: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
N ++N T GD + K KD++ S + F D+ LK ELL
Sbjct: 4 NDVDNELLDYEDDEVETAAGGDGAEAPAK---KDVK---GSYVSIHSSGFRDFLLKPELL 57
Query: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
I + G+E PS +Q E IP A+ G D+L +AK+G GK+ +++ L++L+ + +
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR-DDIMRLDDTVHVVIATPGRIL 227
V+ TRELA Q+S+ + SK+M KV GG +++ D+ + + H+V+ TPGRIL
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 228 DLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSATFPLSVQK 286
L + + H++ +LDE DK+L Q D + +++I P +Q++++SAT ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 287 FMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSS 344
+Q P EI + +E LTL G+ QYY + + +K L L L+ NQ +IF S
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSV 297
Query: 345 QRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 404
QR LA+ + + + IH M QE R + F++ R LV T+LF RG+DI+ VN
Sbjct: 298 QRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVN 357
Query: 405 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTEIKPIPSN 463
+ N+D P+ ++TYLHR+ R+GRFG GLAI ++ +D L ++++ I +P
Sbjct: 358 IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDE 417
Query: 464 IDKSLYVAE 472
ID S Y+ +
Sbjct: 418 IDISSYIEQ 426
>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
sapiens]
Length = 824
Score = 225 bits (573), Expect = 8e-59
Identities = 134/396 (33%), Positives = 212/396 (53%), Gaps = 12/396 (3%)
Query: 84 RIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNG 143
R +T DV + +FE L R +L G+ G+E+PSP+Q ++IP+ G D++ +AK+G
Sbjct: 50 RTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 109
Query: 144 TGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGT 203
TGK+ + L+ L L+ + Q +++ PTRE+A+Q+ + + M G + GGT
Sbjct: 110 TGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169
Query: 204 NLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMED 262
L D RL H+ + +PGRI LI+ +++ +LDEADKLL + F + +
Sbjct: 170 PLSQDKTRLKKC-HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINW 228
Query: 263 IILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL-MEELTLKGVTQYYAYVTE--- 318
I +LP ++Q+L SAT+P + + +++ P + L + +L G+ QYY V
Sbjct: 229 IYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPL 288
Query: 319 -----RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHR 373
+K L LFSR+ NQ+++F N R + LA +S G+ I M Q R
Sbjct: 289 AHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQR 348
Query: 374 NRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGL 433
++ CR L+ TDL +RGID + VN+V+N D P ETY+HRIGR+GRFG LGL
Sbjct: 349 LDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGL 408
Query: 434 AINLITYDDRFN-LKSIEEQLGTEIKPIPSNIDKSL 468
+ + N + I ++ + P+P I L
Sbjct: 409 TVTYCCRGEEENMMMRIAQKCNINLLPLPDPIPSGL 444
>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Homo sapiens]
Length = 455
Score = 215 bits (547), Expect = 8e-56
Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 5/382 (1%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
F+D + L ++GW KP+ IQ E+IP+AL GRDI+ A+ G+GK+GA+ +P+L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
L + A+V+ PTRELA Q+S+ + +G + GG + + L H
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIG-VQSAVIVGGIDSMSQSLALAKKPH 144
Query: 218 VVIATPGRILDLIK--KGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275
++IATPGR++D ++ KG + ++ +V+DEAD++L+ DF ++ I+ +P++R+ L
Sbjct: 145 IIIATPGRLIDHLENTKGF-NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 203
Query: 276 YSATFPLSVQKFMNSHLQKPYEINLMEEL-TLKGVTQYYAYVTERQKVHCLNTLFSRLQI 334
+SAT VQK + L+ P + + + T++ + QYY ++ + K L + + L
Sbjct: 204 FSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAG 263
Query: 335 NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLF 394
N +IFC++ + A + LG++ +H +M Q R + F+ L+ TD+
Sbjct: 264 NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVA 323
Query: 395 TRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454
+RG+DI V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D + IE +G
Sbjct: 324 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIG 383
Query: 455 TEIKPIPSNIDKSLYVAEYHSE 476
++ P+ D+ + + E +E
Sbjct: 384 KKLPGFPTQDDEVMMLTERVAE 405
>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
sapiens]
Length = 483
Score = 211 bits (537), Expect = 1e-54
Identities = 132/375 (35%), Positives = 210/375 (56%), Gaps = 15/375 (4%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155
FE+ LK ELL GI+ MG+ +PS IQE ++P+ L+ ++++A++++GTGK+ A+++ +L
Sbjct: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
R++ + Q + + PT ELALQ ++ Q+ K +VM G + D T
Sbjct: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGT---DIT 215
Query: 216 VHVVIATPGRILD-LIKKGVAKVDHVQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQI 273
++I TPG +LD K + + +++ VLDEAD ++ +Q F I LP Q+
Sbjct: 216 KQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQM 275
Query: 274 LLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSR 331
LL+SATF SV F + P I L EELTL + QYY R+ K L ++
Sbjct: 276 LLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGS 335
Query: 332 LQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT 391
+ I Q+IIFC + + + L ++ Q G+ + ++ E R + FR+G + L+ T
Sbjct: 336 ITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITT 395
Query: 392 DLFTRGIDIQAVNVVINFDFPKLA------ETYLHRIGRSGRFGHLGLAINLITYDDRFN 445
++ RGID++ V +V+NFD P ETYLHRIGR+GRFG GLA N+I D+ +
Sbjct: 396 NVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPS 455
Query: 446 LKSIEEQLGTEIKPI 460
L I++ + IK +
Sbjct: 456 LMKIQDHFNSSIKQL 470
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 205 bits (521), Expect = 8e-53
Identities = 117/374 (31%), Positives = 206/374 (55%), Gaps = 11/374 (2%)
Query: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162
+ ++L + + G+EKP+PIQ ++IP +SGRD++ AK G+GK+ A+L+P+ + ++
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
Query: 163 DNIQ-----AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
+ A+++ PTRELALQ+++ C + SK +G +V+ GGT + + I L
Sbjct: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG-LRVVCVYGGTGISEQIAELKRGAE 497
Query: 218 VVIATPGRILDLIKKGVAKVDH---VQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQIL 274
+++ TPGR++D++ +V + V +VLDEAD++ F + I+ + +RQ +
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557
Query: 275 LYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
++SATFP +++ L KP E+ + + V Q + E +K L L Q
Sbjct: 558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617
Query: 334 INQS-IIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
+ S IIF + + + L K + + Y C +H + Q R+ + +DF+NG C+ LV T
Sbjct: 618 ESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATS 677
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQ 452
+ RG+D++ + +V+N+ P E Y+HR GR+GR G+ G A IT D I +
Sbjct: 678 VAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKA 737
Query: 453 LGTEIKPIPSNIDK 466
L +P +++K
Sbjct: 738 LELSGTAVPPDLEK 751
>gi|8922886 DDX19-like protein [Homo sapiens]
Length = 478
Score = 204 bits (518), Expect = 2e-52
Identities = 135/380 (35%), Positives = 215/380 (56%), Gaps = 18/380 (4%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155
FE+ LK +LL G++ MG+ +PS IQE ++P+ L+ ++++A++++GTGK+ A+++ +L
Sbjct: 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
R++ Q + + PT ELALQ ++ Q+ K K+ G L ++ +
Sbjct: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE- 210
Query: 216 VHVVIATPGRILDLIKKGVAKVD--HVQMIVLDEADKLLSQDFVQIME-DIILTLPKNRQ 272
+VI TPG +LD K + +D +++ VLDEAD +++ Q I LP+N Q
Sbjct: 211 -QIVIGTPGTVLDWCSK-LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268
Query: 273 ILLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTER-QKVHCLNTLFS 330
+LL+SATF SV KF + P I L EE TL + QYY + R +K L L+
Sbjct: 269 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYG 328
Query: 331 RLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVC 390
+ I Q++IFC++ + LA ++S+ G+ + +M E R V FR G + LV
Sbjct: 329 AITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVT 388
Query: 391 TDLFTRGIDIQAVNVVINFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYDDRF 444
T++ RGID++ V+VVINFD P ETYLHRIGR+GRFG GLA+N++
Sbjct: 389 TNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSM 448
Query: 445 N-LKSIEEQLGTEIKPIPSN 463
N L I+E +I+ + ++
Sbjct: 449 NILNRIQEHFNKKIERLDTD 468
>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
sapiens]
Length = 479
Score = 203 bits (516), Expect = 3e-52
Identities = 134/380 (35%), Positives = 215/380 (56%), Gaps = 18/380 (4%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155
FE+ LK +LL G++ MG+ +PS IQE ++P+ L+ ++++A++++GTGK+ A+++ +L
Sbjct: 94 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 153
Query: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
+++ Q + + PT ELALQ ++ Q+ K K+ G L ++ +
Sbjct: 154 SQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE- 211
Query: 216 VHVVIATPGRILDLIKKGVAKVD--HVQMIVLDEADKLLSQDFVQIME-DIILTLPKNRQ 272
+VI TPG +LD K + +D +++ VLDEAD +++ Q I LP+N Q
Sbjct: 212 -QIVIGTPGTVLDWCSK-LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 269
Query: 273 ILLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTER-QKVHCLNTLFS 330
+LL+SATF SV KF + P I L EE TL + QYY + R +K L L+
Sbjct: 270 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYG 329
Query: 331 RLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVC 390
+ I Q++IFC++ + LA ++S+ G+ + +M E R V FR G + LV
Sbjct: 330 AITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVT 389
Query: 391 TDLFTRGIDIQAVNVVINFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYDDRF 444
T++ RGID++ V+VVINFD P ETYLHRIGR+GRFG GLA+N++
Sbjct: 390 TNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSM 449
Query: 445 N-LKSIEEQLGTEIKPIPSN 463
N L I+E +I+ + ++
Sbjct: 450 NILNRIQEHFNKKIERLDTD 469
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 196 bits (499), Expect = 3e-50
Identities = 121/381 (31%), Positives = 201/381 (52%), Gaps = 8/381 (2%)
Query: 97 EFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156
+FE L L + + G+E P+PIQ + IP+ L GRDILA A G+GK+ A+L+P++
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 157 RLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTV 216
R + A+++ PTRELA+Q+ + ++ + K + GG L + RL V
Sbjct: 264 RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
Query: 217 HVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLY 276
V+IATPGR+LD+IK+ ++ V+++V+DEAD +L F Q + DI+ +P + Q +L
Sbjct: 324 KVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILV 383
Query: 277 SATFPLSVQKFMNSHLQKPYEINLMEE-LTLKGVTQYYAYVTERQKVHCLNTLFSRLQIN 335
SAT P S+++ + L P I E+ L V Q +V + K L + + ++
Sbjct: 384 SATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLF 443
Query: 336 QS--IIFCNSSQRVELLAKKISQL-GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392
+ ++F + +LL++ + ++ G IH++ Q R + G +V T
Sbjct: 444 KPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTG 503
Query: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQ 452
+ RG+D+ +V +V+NFD P + Y+H+IGR GR G G AI I N K +
Sbjct: 504 VLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINN----NSKRLFWD 559
Query: 453 LGTEIKPIPSNIDKSLYVAEY 473
+ +KP S + L + Y
Sbjct: 560 IAKRVKPTGSILPPQLLNSPY 580
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 195 bits (496), Expect = 7e-50
Identities = 129/414 (31%), Positives = 216/414 (52%), Gaps = 45/414 (10%)
Query: 73 KKTLKLPPKDLRIKTSDVT-STKGNE-------FEDYCLKRELLMGIFEMGWEKPSPIQE 124
KK ++ +D RI D + +TKG + ++D L +L I + G+++P+PIQ
Sbjct: 360 KKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQR 419
Query: 125 ESIPIALSGRDILARAKNGTGKSGAYLIPLL---------ERLDLKKDNIQAMVIVPTRE 175
++IPI L RDI+ A+ G+GK+ A+LIPLL +R++ A+++ PTRE
Sbjct: 420 QAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRE 479
Query: 176 LALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVA 235
LA Q+ + I+ K +G + +A GG + D RL +VIATPGR++D+++
Sbjct: 480 LAQQIEEETIKFGKPLG-IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYL 538
Query: 236 KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP--------------------------K 269
+ +VLDEAD+++ F ++ I+ +P K
Sbjct: 539 VLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHK 598
Query: 270 NRQILLYSATFPLSVQKFMNSHLQKPYEINLMEE-LTLKGVTQYYAYVTERQKVHCLNTL 328
RQ ++++AT P +V++ S+L++P + + + V Q ++E +K L +
Sbjct: 599 YRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAI 658
Query: 329 FSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNL 388
+ IIF N + ++LAK + ++GY+ +H QE R + + G L
Sbjct: 659 LEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDIL 718
Query: 389 VCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDD 442
V TD+ RGIDIQ V++V+N+D K E Y+HRIGR+GR G G+AI +T +D
Sbjct: 719 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKED 772
>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
sapiens]
Length = 483
Score = 195 bits (496), Expect = 7e-50
Identities = 118/355 (33%), Positives = 196/355 (55%), Gaps = 10/355 (2%)
Query: 113 EMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVP 172
++G ++P+P+Q IP L GRD L AK G+GK+ A+++P+L++L I +V+ P
Sbjct: 19 QLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTP 78
Query: 173 TRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKK 232
TRELA Q+++ + K +G K GG ++ + L HVVIATPGR+ D ++
Sbjct: 79 TRELAYQIAEQFRVLGKPLG-LKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRS 137
Query: 233 G-VAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTLPKNRQILLYSATFPLSVQKFM 288
+ ++ +V+DEAD+LL Q DF +E I+ +P RQ LL+SAT ++++
Sbjct: 138 SNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQ 197
Query: 289 NSHLQKPYEINLMEEL-TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQS----IIFCNS 343
+P+ + T++ + Q Y V E+ K L L R Q IIF N+
Sbjct: 198 GLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNT 257
Query: 344 SQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAV 403
+ ++L + + + +H+ M+Q+ R F++ + R L+ TD+ +RG+DI V
Sbjct: 258 CKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTV 317
Query: 404 NVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIK 458
VVIN + P L + Y+HR+GR+ R G G AI L+T D + +IEEQ+ +++
Sbjct: 318 QVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLE 372
>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
sapiens]
Length = 648
Score = 193 bits (491), Expect = 3e-49
Identities = 122/361 (33%), Positives = 193/361 (53%), Gaps = 14/361 (3%)
Query: 91 TSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAY 150
T T + F+ Y E++ I + G++KP+PIQ ++ PI L G D++ A+ GTGK+ Y
Sbjct: 240 TCTFDDAFQCY---PEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCY 296
Query: 151 LIP------LLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTN 204
L+P L L +++ +V+ PTRELALQV C + S G + + GG N
Sbjct: 297 LMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYK--GLRSVCVYGGGN 354
Query: 205 LRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264
+ I L V ++IATPGR+ DL + ++ +VLDEADK+L F + I+
Sbjct: 355 RDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKIL 414
Query: 265 LTLPKNRQILLYSATFPLSVQKFMNSHLQKPY--EINLMEELTLKGVTQYYAYVTERQK- 321
L + +RQ ++ SAT+P SV + S+L++P + ++ + + V Q TE +K
Sbjct: 415 LDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKW 474
Query: 322 VHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFR 381
H L S ++ I+F + + L+ + S +H Q R + +F+
Sbjct: 475 SHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFK 534
Query: 382 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 441
G R L+ TDL +RG+D+ V V NFDFP+ E Y+HRIGR+GR G G++I +T +
Sbjct: 535 TGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRN 594
Query: 442 D 442
D
Sbjct: 595 D 595
>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
[Homo sapiens]
Length = 881
Score = 193 bits (490), Expect = 3e-49
Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 6/363 (1%)
Query: 85 IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGT 144
++ + K F+ L + GI + G++ P+PIQ ++IP+ L G+D++A A+ G+
Sbjct: 85 VRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGS 144
Query: 145 GKSGAYLIPLLERLDLK--KDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGG 202
GK+ +L+P+ ERL + +A+++ PTRELALQ + ++ K G K GG
Sbjct: 145 GKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG-LKTALILGG 203
Query: 203 TNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMED 262
+ D L + ++IATPGR++ + + K+ V+ +V DEAD+L F + +++
Sbjct: 204 DRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQE 263
Query: 263 IILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTL-KGVTQYYAYVTERQK 321
II LP Q +L+SAT P + +F + L +P I L + L + + + V E K
Sbjct: 264 IIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTK 323
Query: 322 VHCLNTLFSRL--QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHD 379
L L + +Q+++F + E L + ++ SC +I++ + R
Sbjct: 324 AAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAK 383
Query: 380 FRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 439
F G C L+ TDL RG+DI ++ VIN+ FP + +LHR+GR R G G A +L+
Sbjct: 384 FTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVA 443
Query: 440 YDD 442
D+
Sbjct: 444 PDE 446
>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
[Homo sapiens]
Length = 882
Score = 193 bits (490), Expect = 3e-49
Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 6/363 (1%)
Query: 85 IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGT 144
++ + K F+ L + GI + G++ P+PIQ ++IP+ L G+D++A A+ G+
Sbjct: 85 VRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGS 144
Query: 145 GKSGAYLIPLLERLDLK--KDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGG 202
GK+ +L+P+ ERL + +A+++ PTRELALQ + ++ K G K GG
Sbjct: 145 GKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG-LKTALILGG 203
Query: 203 TNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMED 262
+ D L + ++IATPGR++ + + K+ V+ +V DEAD+L F + +++
Sbjct: 204 DRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQE 263
Query: 263 IILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTL-KGVTQYYAYVTERQK 321
II LP Q +L+SAT P + +F + L +P I L + L + + + V E K
Sbjct: 264 IIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTK 323
Query: 322 VHCLNTLFSRL--QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHD 379
L L + +Q+++F + E L + ++ SC +I++ + R
Sbjct: 324 AAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAK 383
Query: 380 FRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 439
F G C L+ TDL RG+DI ++ VIN+ FP + +LHR+GR R G G A +L+
Sbjct: 384 FTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVA 443
Query: 440 YDD 442
D+
Sbjct: 444 PDE 446
>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
[Homo sapiens]
Length = 370
Score = 189 bits (479), Expect = 6e-48
Identities = 127/364 (34%), Positives = 204/364 (56%), Gaps = 18/364 (4%)
Query: 114 MGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIV 171
MG+ +PS IQE ++P+ L+ ++++A++++GTGK+ A+++ +L +++ Q + +
Sbjct: 1 MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLS 60
Query: 172 PTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIK 231
PT ELALQ ++ Q+ K K+ G L ++ + +VI TPG +LD
Sbjct: 61 PTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE--QIVIGTPGTVLDWCS 117
Query: 232 KGVAKVD--HVQMIVLDEADKLLSQDFVQIME-DIILTLPKNRQILLYSATFPLSVQKFM 288
K + +D +++ VLDEAD +++ Q I LP+N Q+LL+SATF SV KF
Sbjct: 118 K-LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFA 176
Query: 289 NSHLQKPYEINLM-EELTLKGVTQYYAYVTER-QKVHCLNTLFSRLQINQSIIFCNSSQR 346
+ P I L EE TL + QYY + R +K L L+ + I Q++IFC++ +
Sbjct: 177 QKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKT 236
Query: 347 VELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 406
LA ++S+ G+ + +M E R V FR G + LV T++ RGID++ V+VV
Sbjct: 237 ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVV 296
Query: 407 INFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYDDRFN-LKSIEEQLGTEIKP 459
INFD P ETYLHRIGR+GRFG GLA+N++ N L I+E +I+
Sbjct: 297 INFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIER 356
Query: 460 IPSN 463
+ ++
Sbjct: 357 LDTD 360
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 185 bits (469), Expect = 9e-47
Identities = 118/381 (30%), Positives = 197/381 (51%), Gaps = 14/381 (3%)
Query: 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140
K++ ++ DV F + ++ + + + +P+PIQ + P+ALSGRD++ A
Sbjct: 156 KEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIA 215
Query: 141 KNGTGKSGAYLIPLLERLDLKK-----DNIQAMVIVPTRELALQVSQICIQVSKHMGGAK 195
+ G+GK+ AYL+P + ++ + D +V+ PTRELA QV Q+ K K
Sbjct: 216 QTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK-CSRLK 274
Query: 196 VMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQD 255
GG I L+ V + IATPGR++D ++ G + +VLDEAD++L
Sbjct: 275 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 334
Query: 256 FVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL--MEELTLKGVTQYY 313
F + I+ + +RQ L++SAT+P V++ L+ +IN+ +E + Q
Sbjct: 335 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 394
Query: 314 AYVTERQKVHCLNTLFSRLQI---NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQ 370
E +K H L L + N++IIF + +R + L +++ + G+ IH Q
Sbjct: 395 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 454
Query: 371 EHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430
R+ V ++FR+G L+ TD+ +RG+D++ V VIN+D+P +E Y+HRIGR+ R +
Sbjct: 455 PERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTN 514
Query: 431 LGLAINLITYDDRFNLKSIEE 451
G A T NLK E
Sbjct: 515 KGTAYTFFTPG---NLKQARE 532
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 185 bits (469), Expect = 9e-47
Identities = 118/381 (30%), Positives = 197/381 (51%), Gaps = 14/381 (3%)
Query: 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140
K++ ++ DV F + ++ + + + +P+PIQ + P+ALSGRD++ A
Sbjct: 156 KEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIA 215
Query: 141 KNGTGKSGAYLIPLLERLDLKK-----DNIQAMVIVPTRELALQVSQICIQVSKHMGGAK 195
+ G+GK+ AYL+P + ++ + D +V+ PTRELA QV Q+ K K
Sbjct: 216 QTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK-CSRLK 274
Query: 196 VMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQD 255
GG I L+ V + IATPGR++D ++ G + +VLDEAD++L
Sbjct: 275 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 334
Query: 256 FVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL--MEELTLKGVTQYY 313
F + I+ + +RQ L++SAT+P V++ L+ +IN+ +E + Q
Sbjct: 335 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 394
Query: 314 AYVTERQKVHCLNTLFSRLQI---NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQ 370
E +K H L L + N++IIF + +R + L +++ + G+ IH Q
Sbjct: 395 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 454
Query: 371 EHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430
R+ V ++FR+G L+ TD+ +RG+D++ V VIN+D+P +E Y+HRIGR+ R +
Sbjct: 455 PERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTN 514
Query: 431 LGLAINLITYDDRFNLKSIEE 451
G A T NLK E
Sbjct: 515 KGTAYTFFTPG---NLKQARE 532
>gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo
sapiens]
Length = 875
Score = 185 bits (469), Expect = 9e-47
Identities = 132/456 (28%), Positives = 234/456 (51%), Gaps = 19/456 (4%)
Query: 26 KPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLR 84
K PG G + N+ K ++ ++Q + + + + +L +
Sbjct: 3 KTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVERESISRLMQNYEK 62
Query: 85 IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGT 144
I +++T F D+ L ++ L G+ E + + IQ+++I +AL G+D+L AK G+
Sbjct: 63 INVNEIT-----RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGS 117
Query: 145 GKSGAYLIPLLERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATT 200
GK+ A+L+P+LE L D + ++I PTRELA Q ++ +V K+ + +
Sbjct: 118 GKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLII- 176
Query: 201 GGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVA-KVDHVQMIVLDEADKLLSQDFVQI 259
GG +L+ + R+++ +++++ TPGR+L + + V+ +QM+VLDEAD++L F
Sbjct: 177 GGKDLKHEAERINN-INILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADT 235
Query: 260 MEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL---TLKGVTQYYAYV 316
M +I LPK RQ LL+SAT SV+ L+ P + + E+ T + Q Y
Sbjct: 236 MNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVC 295
Query: 317 TERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQL--GYSCFYIHAKMRQEHRN 374
+QK+ L + +SI+F +S + V+ L + +L G S +H + +Q R
Sbjct: 296 ELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 375 RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 434
V+++F L TD+ RG+D AVN V+ FD P+ A TY+HR GR+ R+ G A
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 435 INLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
+ ++ ++ ++ + Q +K I N +K + V
Sbjct: 416 LLILLPSEKAMVQQL-LQKKVPVKEIKINPEKLIDV 450
>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
[Homo sapiens]
Length = 724
Score = 183 bits (465), Expect = 3e-46
Identities = 119/358 (33%), Positives = 191/358 (53%), Gaps = 24/358 (6%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
FE+ L + L I + G+ K +P+Q+ SIPI L+GRD++A A+ G+GK+ A+L+P+L
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349
Query: 158 LDLKKDNIQA-----------MVIVPTRELALQVSQICIQVSKHMGGAKVMATT--GGTN 204
+ D I A +++ PTREL V+QI ++ K G V A GGT
Sbjct: 350 M--MHDGITASRFKELQEPECIIVAPTREL---VNQIYLEARKFSFGTCVRAVVIYGGTQ 404
Query: 205 LRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264
L I ++ +++ ATPGR++D+I K + ++ +VLDEAD++L F M+ +I
Sbjct: 405 LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 464
Query: 265 ----LTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL--TLKGVTQYYAYVTE 318
+ + RQ L++SATFP +Q+ L+ Y + ++ + V Q V +
Sbjct: 465 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQ 524
Query: 319 RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFH 378
K L + + ++++F + ++ + +A + Q S IH Q R +
Sbjct: 525 FSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 584
Query: 379 DFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAIN 436
DFR G C LV T + RG+DI+ V VINFD P + Y+HRIGR+GR G+ G AI+
Sbjct: 585 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 642
>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
[Homo sapiens]
Length = 724
Score = 183 bits (465), Expect = 3e-46
Identities = 119/358 (33%), Positives = 191/358 (53%), Gaps = 24/358 (6%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
FE+ L + L I + G+ K +P+Q+ SIPI L+GRD++A A+ G+GK+ A+L+P+L
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349
Query: 158 LDLKKDNIQA-----------MVIVPTRELALQVSQICIQVSKHMGGAKVMATT--GGTN 204
+ D I A +++ PTREL V+QI ++ K G V A GGT
Sbjct: 350 M--MHDGITASRFKELQEPECIIVAPTREL---VNQIYLEARKFSFGTCVRAVVIYGGTQ 404
Query: 205 LRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264
L I ++ +++ ATPGR++D+I K + ++ +VLDEAD++L F M+ +I
Sbjct: 405 LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 464
Query: 265 ----LTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL--TLKGVTQYYAYVTE 318
+ + RQ L++SATFP +Q+ L+ Y + ++ + V Q V +
Sbjct: 465 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQ 524
Query: 319 RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFH 378
K L + + ++++F + ++ + +A + Q S IH Q R +
Sbjct: 525 FSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 584
Query: 379 DFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAIN 436
DFR G C LV T + RG+DI+ V VINFD P + Y+HRIGR+GR G+ G AI+
Sbjct: 585 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 642
>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
[Homo sapiens]
Length = 690
Score = 183 bits (465), Expect = 3e-46
Identities = 119/358 (33%), Positives = 191/358 (53%), Gaps = 24/358 (6%)
Query: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
FE+ L + L I + G+ K +P+Q+ SIPI L+GRD++A A+ G+GK+ A+L+P+L
Sbjct: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
Query: 158 LDLKKDNIQA-----------MVIVPTRELALQVSQICIQVSKHMGGAKVMATT--GGTN 204
+ D I A +++ PTREL V+QI ++ K G V A GGT
Sbjct: 316 M--MHDGITASRFKELQEPECIIVAPTREL---VNQIYLEARKFSFGTCVRAVVIYGGTQ 370
Query: 205 LRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264
L I ++ +++ ATPGR++D+I K + ++ +VLDEAD++L F M+ +I
Sbjct: 371 LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 430
Query: 265 ----LTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL--TLKGVTQYYAYVTE 318
+ + RQ L++SATFP +Q+ L+ Y + ++ + V Q V +
Sbjct: 431 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQ 490
Query: 319 RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFH 378
K L + + ++++F + ++ + +A + Q S IH Q R +
Sbjct: 491 FSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 550
Query: 379 DFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAIN 436
DFR G C LV T + RG+DI+ V VINFD P + Y+HRIGR+GR G+ G AI+
Sbjct: 551 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 608
>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
sapiens]
Length = 631
Score = 181 bits (459), Expect = 1e-45
Identities = 111/346 (32%), Positives = 182/346 (52%), Gaps = 11/346 (3%)
Query: 106 ELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLK---- 161
+LL I +G KP+PIQ ++ PI L G D++ A+ GTGK+ +YL+P LD +
Sbjct: 232 DLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISR 291
Query: 162 --KDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVV 219
++ +V+ PTRELAL V C + S G K + GG N I + V ++
Sbjct: 292 EQRNGPGMLVLTPTRELALHVEAECSKYSYK--GLKSICIYGGRNRNGQIEDISKGVDII 349
Query: 220 IATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSAT 279
IATPGR+ DL + + +V+DEADK+L +F + I+L + +RQ ++ SAT
Sbjct: 350 IATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSAT 409
Query: 280 FPLSVQKFMNSHLQKPYEINL--MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQS 337
+P +V++ S+L+ P + + + + + V Q TE++K + N
Sbjct: 410 WPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDK 469
Query: 338 IIFCNSSQRV-ELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTR 396
+I S + + + L+ + G S +H Q + R DF++G + L+ TD+ +R
Sbjct: 470 VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSR 529
Query: 397 GIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDD 442
G+D+ V V N+DFP+ + Y+HR+G GR G G ++ LIT D
Sbjct: 530 GLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRD 575
>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
sapiens]
Length = 662
Score = 181 bits (459), Expect = 1e-45
Identities = 121/393 (30%), Positives = 204/393 (51%), Gaps = 26/393 (6%)
Query: 106 ELLMGIFEMG-WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL--------- 155
E++MG E+ + +P+P+Q+ +IPI RD++A A+ G+GK+ A+L+P+L
Sbjct: 189 EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPG 248
Query: 156 ERLDLKKDNIQ---------AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR 206
E L K+N + ++V+ PTRELA+Q+ + + S + + GG ++
Sbjct: 249 EALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIG 307
Query: 207 DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIIL- 265
I L+ H+++ATPGR++D++++G +D + +VLDEAD++L F + I+
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ 367
Query: 266 -TLPKN--RQILLYSATFPLSVQKFMNSHLQKPYEINLMEE-LTLKGVTQYYAYVTERQK 321
T+P R +++SATFP +Q L + + + T + +TQ +V E K
Sbjct: 368 DTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDK 427
Query: 322 VHCLNTLFSRL-QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDF 380
L L + + + +++F + + + L + GY+C IH Q R H F
Sbjct: 428 RSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQF 487
Query: 381 RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITY 440
R+G LV T + RG+DI V VINFD P E Y+HRIGR+GR G+LGLA +
Sbjct: 488 RSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNE 547
Query: 441 DDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEY 473
+ K + + L + +PS ++ Y Y
Sbjct: 548 RNINITKDLLDLLVEAKQEVPSWLENMAYEHHY 580
>gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo
sapiens]
Length = 600
Score = 181 bits (458), Expect = 2e-45
Identities = 113/355 (31%), Positives = 188/355 (52%), Gaps = 23/355 (6%)
Query: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERL---- 158
L ++L + E+G+ +P+Q +IP+ + +D+ A A G+GK+ A++IP+LE L
Sbjct: 16 LHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 159 -DLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTV- 216
LKK + A++I PTRELA+Q+ ++ +KH + GG N +D+ R
Sbjct: 76 EKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGG 135
Query: 217 HVVIATPGRILDLIKKGVAKVD------HVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270
++++ATPGR+ D+ ++ +D + ++VLDEAD+LL F + I+ LPK
Sbjct: 136 NIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ 195
Query: 271 RQILLYSATFPLSVQKFMNSHLQKPYEINLME--------ELTLKGVTQYYAYVTERQKV 322
R+ L+SAT V+ + + L+ P +++ E + T + YY +K
Sbjct: 196 RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKF 255
Query: 323 HCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDF 380
+ L + + ++F ++ VE K + L G IH KM+ + RN++F +F
Sbjct: 256 NQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIFMEF 314
Query: 381 RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAI 435
R LVCTD+ RGIDI VN V+ +D P A ++HR GR+ R GH G A+
Sbjct: 315 RKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSAL 369
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 180 bits (457), Expect = 2e-45
Identities = 120/393 (30%), Positives = 204/393 (51%), Gaps = 26/393 (6%)
Query: 106 ELLMGIFEMG-WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL--------- 155
E++MG E+ + +P+P+Q+ +IPI RD++A A+ G+GK+ A+L+P+L
Sbjct: 187 EIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 246
Query: 156 ERLDLKKDNIQ---------AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR 206
E L K+N + ++V+ PTRELA+Q+ + + S + + GG ++
Sbjct: 247 EALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIG 305
Query: 207 DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIIL- 265
I L+ H+++ATPGR++D++++G +D + +VLDEAD++L F + I+
Sbjct: 306 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ 365
Query: 266 -TLPKN--RQILLYSATFPLSVQKFMNSHLQKPYEINL-MEELTLKGVTQYYAYVTERQK 321
T+P R +++SATFP +Q L + + + T + +TQ +V + K
Sbjct: 366 DTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDK 425
Query: 322 -VHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDF 380
L+ L + + +++F + + + L + GY+C IH Q R H F
Sbjct: 426 RSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQF 485
Query: 381 RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITY 440
R+G LV T + RG+DI V VINFD P E Y+HRIGR+GR G+LGLA +
Sbjct: 486 RSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNE 545
Query: 441 DDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEY 473
+ K + + L + +PS ++ Y Y
Sbjct: 546 KNMNITKDLLDLLVEAKQEVPSWLENMAYEHHY 578
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,692,924
Number of Sequences: 37866
Number of extensions: 776028
Number of successful extensions: 2607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2336
Number of HSP's gapped (non-prelim): 126
length of query: 483
length of database: 18,247,518
effective HSP length: 106
effective length of query: 377
effective length of database: 14,233,722
effective search space: 5366113194
effective search space used: 5366113194
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.