Guide to the Human Genome
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Name: EIF4A3 Sequence: fasta or formatted (411aa) NCBI GI: 7661920
Description:

eukaryotic translation initiation factor 4A, isoform 3

Referenced in:

DEAD / H Helicase Family
Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         26           1
 C cysteine            1.2          5           1
 D aspartate           6.8         28           2
 E glutamate           7.1         29           2
 F phenylalanine       3.4         14           2
 G glycine             5.8         24           2
 H histidine           1.2          5           1
 I isoleucine          8.3         34           2
 K lysine              5.6         23           1
 L leucine             8.8         36           2
 M methionine          3.9         16           1
 N asparagine          2.9         12           2
 P proline             2.9         12           2
 Q glutamine           4.9         20           2
 R arginine            7.8         32           3
 S serine              4.6         19           2
 T threonine           7.5         31           2
 V valine              7.1         29           2
 W tryptophan          0.7          3           1
 Y tyrosine            3.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4A, isoform ... 
EIF4A2                0.662   eukaryotic translation initiation factor 4A2 
EIF4A1                0.656   eukaryotic translation initiation factor 4A isoform 1...
DDX6                  0.320   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
DDX25                 0.306   DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 
DDX19A                0.293   DDX19-like protein 
BAT1                  0.292   HLA-B associated transcript 1 
BAT1                  0.292   HLA-B associated transcript 1 
DDX19B                0.290   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H...
DDX39                 0.282   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
DDX19B                0.270   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [...
DDX20                 0.260   DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 
DDX19B                0.259   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...
DDX47                 0.251   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX46                 0.241   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX3X                 0.236   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX3Y                 0.234   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.234   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX43                 0.233   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX59                 0.233   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX54                 0.231   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.231   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX27                 0.229   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX17                 0.224   DEAD box polypeptide 17 isoform 3 
DDX17                 0.224   DEAD box polypeptide 17 isoform 1 
DDX5                  0.218   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX21                 0.215   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX41                 0.213   DEAD-box protein abstrakt 
DDX4                  0.211   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.211   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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