BAT1 30618

Name: BAT1	Sequence: fasta or formatted (428aa)		NCBI GI: 4758112
Description: HLA-B associated transcript 1		Referenced in: DEAD / H Helicase Family Small RNAs in RNA Processing
Other entries for this name: alt mRNA [428aa] HLA-B associated transcript 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 26 2 C cysteine 1.9 8 1 D aspartate 7.5 32 2 E glutamate 8.2 35 2 F phenylalanine 5.6 24 2 G glycine 4.9 21 2 H histidine 2.6 11 1 I isoleucine 6.1 26 1 K lysine 6.8 29 2 L leucine 9.6 41 2 M methionine 3.5 15 2 N asparagine 3.7 16 1 P proline 3.5 15 1 Q glutamine 5.4 23 2 R arginine 5.8 25 2 S serine 4.7 20 2 T threonine 3.5 15 1 V valine 8.4 36 2 W tryptophan 0.0 0 0 Y tyrosine 2.3 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HLA-B associated transcript 1 BAT1 1.000 HLA-B associated transcript 1 DDX39 0.914 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 EIF4A2 0.285 eukaryotic translation initiation factor 4A2 EIF4A1 0.278 eukaryotic translation initiation factor 4A isoform 1... EIF4A3 0.277 eukaryotic translation initiation factor 4A, isoform ... DDX6 0.265 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 DDX20 0.247 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 DDX47 0.225 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... DDX19B 0.225 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H... DDX19A 0.223 DDX19-like protein DDX19B 0.209 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [... DDX27 0.205 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 DDX19B 0.200 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [... DDX25 0.196 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 DDX49 0.196 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 DDX23 0.195 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 DDX46 0.194 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 DDX41 0.186 DEAD-box protein abstrakt DDX59 0.186 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 DDX47 0.178 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ... DDX3Y 0.177 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... DDX3Y 0.177 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... DDX3X 0.176 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... DDX17 0.172 DEAD box polypeptide 17 isoform 3 DDX17 0.172 DEAD box polypeptide 17 isoform 1 DDX42 0.169 DEAD box polypeptide 42 protein DDX42 0.169 DEAD box polypeptide 42 protein DDX43 0.167 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 DDX4 0.166 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.