Guide to the Human Genome
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Name: DDX19A Sequence: fasta or formatted (478aa) NCBI GI: 8922886
Description:

DDX19-like protein

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         36           2
 C cysteine            1.7          8           1
 D aspartate           5.6         27           2
 E glutamate           8.2         39           3
 F phenylalanine       3.1         15           1
 G glycine             4.6         22           1
 H histidine           1.3          6           1
 I isoleucine          6.1         29           2
 K lysine              7.9         38           2
 L leucine             9.6         46           2
 M methionine          3.1         15           2
 N asparagine          4.8         23           1
 P proline             3.8         18           2
 Q glutamine           6.1         29           1
 R arginine            5.2         25           1
 S serine              5.6         27           2
 T threonine           5.4         26           2
 V valine              7.3         35           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDX19-like protein 
DDX19B                0.969   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H...
DDX19B                0.885   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...
DDX19B                0.769   DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [...
DDX25                 0.651   DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 
EIF4A2                0.267   eukaryotic translation initiation factor 4A2 
EIF4A1                0.265   eukaryotic translation initiation factor 4A isoform 1...
EIF4A3                0.251   eukaryotic translation initiation factor 4A, isoform ...
BAT1                  0.201   HLA-B associated transcript 1 
BAT1                  0.201   HLA-B associated transcript 1 
DDX39                 0.195   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
DDX6                  0.195   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
DDX20                 0.185   DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 
DDX47                 0.155   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX27                 0.146   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX42                 0.141   DEAD box polypeptide 42 protein 
DDX42                 0.141   DEAD box polypeptide 42 protein 
DDX3X                 0.140   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX3Y                 0.138   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.138   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX49                 0.135   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX23                 0.130   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX56                 0.129   DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 
DDX59                 0.125   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX47                 0.124   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX4                  0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX52                 0.122   ATP-dependent RNA helicase ROK1 isoform a 
DDX43                 0.122   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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