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Search of human proteins with 164419732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
sapiens]
(483 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap... 960 0.0
gi|8922886 DDX19-like protein [Homo sapiens] 622 e-178
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H... 620 e-178
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [... 555 e-158
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [... 538 e-153
gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 265 9e-71
gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 264 2e-70
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 256 3e-68
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 211 1e-54
gi|4758112 HLA-B associated transcript 1 [Homo sapiens] 187 2e-47
gi|18375623 HLA-B associated transcript 1 [Homo sapiens] 187 2e-47
gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi... 186 4e-47
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi... 179 7e-45
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 163 4e-40
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 155 8e-38
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 155 8e-38
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 149 4e-36
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 149 4e-36
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 149 6e-36
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 149 6e-36
gi|9506931 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Homo sapiens] 149 6e-36
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 147 3e-35
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] 146 4e-35
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 145 6e-35
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 145 6e-35
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... 145 6e-35
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] 143 4e-34
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] 143 4e-34
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... 142 5e-34
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... 142 5e-34
>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
sapiens]
Length = 483
Score = 960 bits (2481), Expect = 0.0
Identities = 483/483 (100%), Positives = 483/483 (100%)
Query: 1 MASLLWGGDAGAAESERLNSHFSNLSQPRKNLWGIKSTAVRNIDGSINNINEDDEEDVVD 60
MASLLWGGDAGAAESERLNSHFSNLSQPRKNLWGIKSTAVRNIDGSINNINEDDEEDVVD
Sbjct: 1 MASLLWGGDAGAAESERLNSHFSNLSQPRKNLWGIKSTAVRNIDGSINNINEDDEEDVVD 60
Query: 61 LAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRP 120
LAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRP
Sbjct: 61 LAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRP 120
Query: 121 SKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELA 180
SKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELA
Sbjct: 121 SKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELA 180
Query: 181 LQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTK 240
LQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTK
Sbjct: 181 LQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTK 240
Query: 241 IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI 300
IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI
Sbjct: 241 IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI 300
Query: 301 KLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQ 360
KLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQ
Sbjct: 301 KLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQ 360
Query: 361 DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG 420
DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG
Sbjct: 361 DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG 420
Query: 421 EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDEIEK 480
EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDEIEK
Sbjct: 421 EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDEIEK 480
Query: 481 IDY 483
IDY
Sbjct: 481 IDY 483
>gi|8922886 DDX19-like protein [Homo sapiens]
Length = 478
Score = 622 bits (1603), Expect = e-178
Identities = 299/429 (69%), Positives = 370/429 (86%), Gaps = 1/429 (0%)
Query: 54 DEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIY 113
DEE+ D AA SLLNKLI +LV+++++VEVLQ+DP+SPLYSVK+FEELRLK +LL+G+Y
Sbjct: 48 DEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVY 107
Query: 114 AMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCL 173
AMGFNRPSKIQE ALPMMLA PPQNLIAQSQSGTGKTAAFVLAMLSRV + +PQCLCL
Sbjct: 108 AMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCL 167
Query: 174 APTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKL 233
+PTYELALQTG+V+EQMGKF ++++ YA+RGN++ RG I++QI+IGTPGTVLDWC KL
Sbjct: 168 SPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKL 227
Query: 234 KLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERI 293
K ID KI+VFVLDEADVMI TQG D SIRIQR LP CQMLLFSATFEDSVW FA+++
Sbjct: 228 KFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKV 287
Query: 294 IPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKW 353
+PDPNVIKL++EE TL+ I+QYYVLC R +K+QALCN+YG+ITI QA+IFC TR+ A W
Sbjct: 288 VPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASW 347
Query: 354 LTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNF 413
L E+ ++GHQV+LLSGE+ VEQRA++I+RFR+GKEKVL+TTNVCARGIDV+QV++V+NF
Sbjct: 348 LAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINF 407
Query: 414 DLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLM-KIQDHFNSSIKQLNA 472
DLPV + PD ETYLHRIGRTGRFGK+GLA NM++ +++ +IQ+HFN I++L+
Sbjct: 408 DLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDT 467
Query: 473 EDMDEIEKI 481
+D+DEIEKI
Sbjct: 468 DDLDEIEKI 476
>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
sapiens]
Length = 479
Score = 620 bits (1600), Expect = e-178
Identities = 298/434 (68%), Positives = 371/434 (85%), Gaps = 1/434 (0%)
Query: 49 NINEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEEL 108
N + DEE+ D AA SLLNKLI +LV+++++VEVLQ+DP+SPLYSVK+FEELRLK +L
Sbjct: 44 NAEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQL 103
Query: 109 LKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFP 168
L+G+YAMGFNRPSKIQE ALP+MLA PPQNLIAQSQSGTGKTAAFVLAMLS+V +P
Sbjct: 104 LQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYP 163
Query: 169 QCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLD 228
QCLCL+PTYELALQTG+V+EQMGKF ++++ YA+RGN++ RG I++QI+IGTPGTVLD
Sbjct: 164 QCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLD 223
Query: 229 WCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWH 288
WC KLK ID KI+VFVLDEADVMI TQG D SIRIQR LP CQMLLFSATFEDSVW
Sbjct: 224 WCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWK 283
Query: 289 FAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTR 348
FA++++PDPNVIKL++EE TL+ I+QYYVLC R +K+QALCN+YG+ITI QA+IFC TR
Sbjct: 284 FAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTR 343
Query: 349 RNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVT 408
+ A WL E+ ++GHQV+LLSGE+ VEQRA++I+RFR+GKEKVL+TTNVCARGIDV+QV+
Sbjct: 344 KTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVS 403
Query: 409 IVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLM-KIQDHFNSSI 467
+V+NFDLPV + PD ETYLHRIGRTGRFGK+GLA NM++ +++ +IQ+HFN I
Sbjct: 404 VVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKI 463
Query: 468 KQLNAEDMDEIEKI 481
++L+ +D+DEIEKI
Sbjct: 464 ERLDTDDLDEIEKI 477
>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
[Homo sapiens]
Length = 448
Score = 555 bits (1430), Expect = e-158
Identities = 274/434 (63%), Positives = 343/434 (79%), Gaps = 32/434 (7%)
Query: 49 NINEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEEL 108
N + DEE+ D AA SLLNKLI +LV+++++VEVLQ+DP+SPLYSVK+FEELRL
Sbjct: 44 NAEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRL---- 99
Query: 109 LKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFP 168
PQNLIAQSQSGTGKTAAFVLAMLS+V +P
Sbjct: 100 ---------------------------PQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYP 132
Query: 169 QCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLD 228
QCLCL+PTYELALQTG+V+EQMGKF ++++ YA+RGN++ RG I++QI+IGTPGTVLD
Sbjct: 133 QCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLD 192
Query: 229 WCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWH 288
WC KLK ID KI+VFVLDEADVMI TQG D SIRIQR LP CQMLLFSATFEDSVW
Sbjct: 193 WCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWK 252
Query: 289 FAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTR 348
FA++++PDPNVIKL++EE TL+ I+QYYVLC R +K+QALCN+YG+ITI QA+IFC TR
Sbjct: 253 FAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTR 312
Query: 349 RNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVT 408
+ A WL E+ ++GHQV+LLSGE+ VEQRA++I+RFR+GKEKVL+TTNVCARGIDV+QV+
Sbjct: 313 KTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVS 372
Query: 409 IVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLM-KIQDHFNSSI 467
+V+NFDLPV + PD ETYLHRIGRTGRFGK+GLA NM++ +++ +IQ+HFN I
Sbjct: 373 VVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKI 432
Query: 468 KQLNAEDMDEIEKI 481
++L+ +D+DEIEKI
Sbjct: 433 ERLDTDDLDEIEKI 446
>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
[Homo sapiens]
Length = 370
Score = 538 bits (1385), Expect = e-153
Identities = 256/368 (69%), Positives = 315/368 (85%), Gaps = 1/368 (0%)
Query: 115 MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLA 174
MGFNRPSKIQE ALP+MLA PPQNLIAQSQSGTGKTAAFVLAMLS+V +PQCLCL+
Sbjct: 1 MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLS 60
Query: 175 PTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLK 234
PTYELALQTG+V+EQMGKF ++++ YA+RGN++ RG I++QI+IGTPGTVLDWC KLK
Sbjct: 61 PTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLK 120
Query: 235 LIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERII 294
ID KI+VFVLDEADVMI TQG D SIRIQR LP CQMLLFSATFEDSVW FA++++
Sbjct: 121 FIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVV 180
Query: 295 PDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWL 354
PDPNVIKL++EE TL+ I+QYYVLC R +K+QALCN+YG+ITI QA+IFC TR+ A WL
Sbjct: 181 PDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWL 240
Query: 355 TVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFD 414
E+ ++GHQV+LLSGE+ VEQRA++I+RFR+GKEKVL+TTNVCARGIDV+QV++V+NFD
Sbjct: 241 AAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFD 300
Query: 415 LPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLM-KIQDHFNSSIKQLNAE 473
LPV + PD ETYLHRIGRTGRFGK+GLA NM++ +++ +IQ+HFN I++L+ +
Sbjct: 301 LPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTD 360
Query: 474 DMDEIEKI 481
D+DEIEKI
Sbjct: 361 DLDEIEKI 368
>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
[Homo sapiens]
Length = 411
Score = 265 bits (676), Expect = 9e-71
Identities = 143/376 (38%), Positives = 237/376 (63%), Gaps = 14/376 (3%)
Query: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAM 157
TF+ + L+E+LL+GIYA GF +PS IQ+ A+ ++ +++IAQSQSGTGKTA F +++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 158 LSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGTDI 214
L ++ Q L LAPT ELA+Q + + +G + ++VQ I G + R D
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDY-MNVQCHACIGGTNVGEDIRKLDY 155
Query: 215 TKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQ 274
+ ++ GTPG V D + + + I++ VLDEAD M++ +GF + + R LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEMLN-KGFKEQIYDVYRYLPPATQ 213
Query: 275 MLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYG 334
++L SAT + + + DP I ++++ELTL I+Q++V E + K+ LC++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 335 SITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLIT 394
++TI QA+IFC T+R WLT +M + VS + G++ ++R SI++ FR G +VLI+
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIS 333
Query: 395 TNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELP 454
T+V ARG+DV QV++++N+DLP + E Y+HRIGR+GR+G+KG+A N ++ D++
Sbjct: 334 TDVWARGLDVPQVSLIINYDLPNNR------ELYIHRIGRSGRYGRKGVAINFVKNDDIR 387
Query: 455 SLMKIQDHFNSSIKQL 470
L I+ ++++ I ++
Sbjct: 388 ILRDIEQYYSTQIDEM 403
>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
[Homo sapiens]
Length = 406
Score = 264 bits (674), Expect = 2e-70
Identities = 157/387 (40%), Positives = 235/387 (60%), Gaps = 19/387 (4%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAFV 154
V +F+++ L E LL+GIYA GF +PS IQ+ A LP + + ++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGY---DVIAQAQSGTGKTATFA 87
Query: 155 LAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDI 214
+++L ++ Q L LAPT ELA Q +VV +G + + I G +
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDY-MGASCHACIGGTNVRAEVQK 146
Query: 215 TKQ----IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP 270
+ II+GTPG V D + + + I++FVLDEAD M+ ++GF D I + L
Sbjct: 147 LQMEAPHIIVGTPGRVFDMLNR-RYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLN 204
Query: 271 SECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALC 330
S Q++L SAT V ++ + DP I ++KEELTL IRQ+Y+ E + K LC
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 331 NIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEK 390
++Y ++TI QA+IF TRR WLT +M VS + G++ ++R I++ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 391 VLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEV 450
VLITT++ ARGIDV+QV++V+N+DLP + E Y+HRIGR GRFG+KG+A NM+
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNR------ENYIHRIGRGGRFGRKGVAINMVTE 378
Query: 451 DELPSLMKIQDHFNSSIKQ--LNAEDM 475
++ +L I+ +N+SI++ LN D+
Sbjct: 379 EDKRTLRDIETFYNTSIEEMPLNVADL 405
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 256 bits (654), Expect = 3e-68
Identities = 149/380 (39%), Positives = 231/380 (60%), Gaps = 17/380 (4%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFV 154
V F+++ LKE LL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY---DVIAQAQSGTGKTATFA 88
Query: 155 LAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRG----NRIPR 210
+++L ++ Q L LAPT ELA Q +V+ +G + + I G N + +
Sbjct: 89 ISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDY-MGATCHACIGGTNVRNEMQK 147
Query: 211 GTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP 270
I++GTPG V D + + + I++FVLDEAD M+ ++GF D I + L
Sbjct: 148 LQAEAPHIVVGTPGRVFDMLNR-RYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLN 205
Query: 271 SECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALC 330
+ Q++L SAT V ++ + DP I ++KEELTL I+Q+Y+ E + K LC
Sbjct: 206 TSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLC 265
Query: 331 NIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEK 390
++Y ++TI QA+IF TRR WLT +M VS L G++ ++R I++ FR G +
Sbjct: 266 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 391 VLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEV 450
VLITT++ ARGIDV+QV++V+N+DLP + E Y+HRIGR GRFG+KG+A N +
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNR------ENYIHRIGRGGRFGRKGVAINFVTE 379
Query: 451 DELPSLMKIQDHFNSSIKQL 470
++ L I+ +N++++++
Sbjct: 380 EDKRILRDIETFYNTTVEEM 399
>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
Length = 483
Score = 211 bits (537), Expect = 1e-54
Identities = 132/375 (35%), Positives = 210/375 (56%), Gaps = 15/375 (4%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
FE+ LK ELL GI+ MG+ +PS IQE ++P+ L+ ++++A++++GTGK+ A+++ +L
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155
Query: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGT---DIT 215
R++ + Q + + PT ELALQ ++ Q+ K +VM G + D T
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215
Query: 216 KQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQM 275
++I TPG +LD K + + +++ VLDEAD ++ +Q F I LP Q+
Sbjct: 216 VHVVIATPGRILD-LIKKGVAKVDHVQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQI 273
Query: 276 LLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGS 335
LL+SATF SV F + P I L EELTL + QYY R+ K L ++
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSR 331
Query: 336 ITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITT 395
+ I Q+IIFC + + + L ++ Q G+ + ++ E R + FR+G + L+ T
Sbjct: 332 LQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCT 391
Query: 396 NVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPS 455
++ RGID++ V +V+NFD P ETYLHRIGR+GRFG GLA N+I D+ +
Sbjct: 392 DLFTRGIDIQAVNVVINFDFPKLA------ETYLHRIGRSGRFGHLGLAINLITYDDRFN 445
Query: 456 LMKIQDHFNSSIKQL 470
L I++ + IK +
Sbjct: 446 LKSIEEQLGTEIKPI 460
>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 187 bits (475), Expect = 2e-47
Identities = 124/406 (30%), Positives = 211/406 (51%), Gaps = 22/406 (5%)
Query: 86 QKDPSSPLYSVKT--FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQS 143
+KD S+ + F + LK ELL+ I GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 144 QSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAI 203
+SG GKTA FVLA L ++ + L + T ELA Q + E+ K+ +V+V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 204 RGNRIPRGTDITKQ----IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFS 259
G I + ++ K+ I++GTPG +L + K ++L I+ F+LDE D M++
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 260 DHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVL 318
I R P E Q+++FSAT + + + DP I + E +LTL+ ++QYYV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 319 CEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRA 378
+ +K + L ++ + Q +IF ++ + L +++ + + E+R
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 379 SIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRF 438
S Q+F+D + ++L+ TN+ RG+D+++V I N+D+P D +TYLHR+ R GRF
Sbjct: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRF 381
Query: 439 GKKGLAFNMI-EVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY 483
G KGLA + + ++ L +QD F +I +L DEI+ Y
Sbjct: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL----PDEIDISSY 423
>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 187 bits (475), Expect = 2e-47
Identities = 124/406 (30%), Positives = 211/406 (51%), Gaps = 22/406 (5%)
Query: 86 QKDPSSPLYSVKT--FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQS 143
+KD S+ + F + LK ELL+ I GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 144 QSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAI 203
+SG GKTA FVLA L ++ + L + T ELA Q + E+ K+ +V+V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 204 RGNRIPRGTDITKQ----IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFS 259
G I + ++ K+ I++GTPG +L + K ++L I+ F+LDE D M++
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 260 DHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVL 318
I R P E Q+++FSAT + + + DP I + E +LTL+ ++QYYV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 319 CEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRA 378
+ +K + L ++ + Q +IF ++ + L +++ + + E+R
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 379 SIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRF 438
S Q+F+D + ++L+ TN+ RG+D+++V I N+D+P D +TYLHR+ R GRF
Sbjct: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRF 381
Query: 439 GKKGLAFNMI-EVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY 483
G KGLA + + ++ L +QD F +I +L DEI+ Y
Sbjct: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL----PDEIDISSY 423
>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
sapiens]
Length = 427
Score = 186 bits (472), Expect = 4e-47
Identities = 116/381 (30%), Positives = 198/381 (51%), Gaps = 16/381 (4%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
F + LK ELL+ I GF PS++Q +P + +++ Q++SG GKTA FVLA L
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATL 103
Query: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ- 217
++ + L + T ELA Q + E+ K+ V+V G I + ++ K+
Sbjct: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163
Query: 218 ---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQ 274
+++GTPG +L + + L ++ FVLDE D M++ I R P E Q
Sbjct: 164 CPHVVVGTPGRILA-LVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ 222
Query: 275 MLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVLCEHRKDKYQALCNIY 333
++FSAT + + + DP + + E +LTL+ ++QYYV + +K + L ++
Sbjct: 223 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLL 281
Query: 334 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
+ Q IIF ++ + L +++ + + E+R S Q+F+D + ++L+
Sbjct: 282 DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILV 341
Query: 394 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI-EVDE 452
TN+ RG+D+++V IV N+D+P D +TYLHR+ R GRFG KGLA + + ++
Sbjct: 342 ATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGRFGTKGLAITFVSDEND 395
Query: 453 LPSLMKIQDHFNSSIKQLNAE 473
L +QD F ++ +L E
Sbjct: 396 AKILNDVQDRFEVNVAELPEE 416
>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
sapiens]
Length = 824
Score = 179 bits (453), Expect = 7e-45
Identities = 116/354 (32%), Positives = 187/354 (52%), Gaps = 18/354 (5%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
FE L L +L+G+ A GF RPS +Q A+P L +LI Q++SGTGKT F L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ- 217
+ L Q L LAPT E+A+Q V+ +G ++ I G + + K+
Sbjct: 122 DSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 181
Query: 218 -IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQML 276
I +G+PG + +L ++ IR+F+LDEAD +++ F + I +LP+ QML
Sbjct: 182 HIAVGSPGRIKQ-LIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 277 LFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCE-----HR--KDKYQAL 329
SAT+ + + + + + DP ++L + +L ++QYY + H+ ++K Q L
Sbjct: 241 AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHL 300
Query: 330 CNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKE 389
++ I QA++F A+ L + G +SG + QR + + +
Sbjct: 301 QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHC 360
Query: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGL 443
+VLI+T++ +RGID ++V +VVN D+P+ D+ETY+HRIGR GRFG GL
Sbjct: 361 RVLISTDLTSRGIDAEKVNLVVNLDVPL------DWETYMHRIGRAGRFGTLGL 408
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 163 bits (412), Expect = 4e-40
Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 24/399 (6%)
Query: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAM 157
+F+++ L LLK I AMGF +P+ IQ+ +P+ L +++ A + +GTGKTAAF L +
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFALPV 276
Query: 158 LSRV---NALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDI 214
L R+ + L L PT EL +Q V Q+ +FC ++ A+ G +
Sbjct: 277 LERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAA 335
Query: 215 TK---QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPS 271
+ I+I TPG ++D L+ I V +LDEAD M+D + F + I R
Sbjct: 336 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLD-EYFEEQMKEIIRMCSH 394
Query: 272 ECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRK--DKYQAL 329
Q +LFSAT D V A + +P I + +RQ ++ + D+ +
Sbjct: 395 HRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIV 454
Query: 330 CNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKE 389
+ ++F QT++ A + + + G QV L G L+ QR ++RF+D +
Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514
Query: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIE 449
+L+ T+V ARG+D++ V V+NF +P + Y+HR+GRT R G+ G + +++
Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMP------NTIKHYVHRVGRTARAGRAGRSVSLVG 568
Query: 450 VDELPSLMKIQDHFNSSIK-QLNAEDM-----DEIEKID 482
DE L +I + +K ++ +D+ D+IEK++
Sbjct: 569 EDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKME 607
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 155 bits (392), Expect = 8e-38
Identities = 112/368 (30%), Positives = 193/368 (52%), Gaps = 22/368 (5%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
+K++ + + ++L + G+ +P+ IQ A+P +++ ++LI +++G+GKT AF+L
Sbjct: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSG--RDLIGIAKTGSGKTIAFLL 428
Query: 156 AMLSRV---NALELF--PQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPR 210
M + +LE P + + PT ELALQ + ++ K + ++V+ G I
Sbjct: 429 PMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK-TLGLRVVCVYGGTGISE 487
Query: 211 GTDITK---QIIIGTPGTVLDWCFKL--KLIDLTKIRVFVLDEADVMIDTQGFSDHSIRI 265
K +II+ TPG ++D ++ +L ++ VLDEAD M D GF +RI
Sbjct: 488 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD-MGFEPQVMRI 546
Query: 266 QRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDK 325
+ + Q ++FSATF ++ A RI+ P +++ + +++ Q ++ E K K
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEK-K 605
Query: 326 YQALCNIYGSIT-IGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRF 384
+ L + G G IIF + +A L ++++ + L G + R SII F
Sbjct: 606 FLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 385 RDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLA 444
++G K+L+ T+V ARG+DVK + +VVN+ P YE Y+HR GRTGR G KG A
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCP------NHYEDYVHRAGRTGRAGNKGYA 719
Query: 445 FNMIEVDE 452
+ I D+
Sbjct: 720 YTFITEDQ 727
>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Homo sapiens]
Length = 455
Score = 155 bits (392), Expect = 8e-38
Identities = 111/389 (28%), Positives = 193/389 (49%), Gaps = 23/389 (5%)
Query: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
KTF++L + + L + +G+ +P+KIQ A+P+ L +++I +++G+GKT AF L
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQG--RDIIGLAETGSGKTGAFALP 81
Query: 157 MLSRVNALELFPQ---CLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRG-NRIPRGT 212
+L NAL PQ L L PT ELA Q E +G + VQ + G + + +
Sbjct: 82 IL---NALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAVIVGGIDSMSQSL 137
Query: 213 DITKQ--IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP 270
+ K+ III TPG ++D K +L ++ V+DEAD +++ F +I + +P
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMD-FETEVDKILKVIP 196
Query: 271 SECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHR-KDKYQAL 329
+ + LFSAT V + +P + + T+ ++QYY+ + KD Y L
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTY--L 254
Query: 330 CNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKE 389
I + +IFC T N + + + G L G+++ +R + +F+
Sbjct: 255 VYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKAR 314
Query: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIE 449
+L+ T+V +RG+D+ V +VVNFD+P + Y+HR+GRT R G+ G A +
Sbjct: 315 SILLATDVASRGLDIPHVDVVVNFDIPTHS------KDYIHRVGRTARAGRSGKAITFVT 368
Query: 450 VDELPSLMKIQDHFNSSIKQLNAEDMDEI 478
++ +I+ + +D DE+
Sbjct: 369 QYDVELFQRIEHLIGKKLPGFPTQD-DEV 396
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 149 bits (377), Expect = 4e-36
Identities = 121/388 (31%), Positives = 187/388 (48%), Gaps = 29/388 (7%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
V F + ++ + F P+ IQ P+ L+ ++++ +Q+G+GKT A++L
Sbjct: 170 VFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSG--RDMVGIAQTGSGKTLAYLL 227
Query: 156 AMLSRVNALELF-----PQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPR 210
+ +N P CL LAPT ELA Q +V + GK C ++ G P+
Sbjct: 228 PAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGG--APK 284
Query: 211 GTDITK-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRI 265
G I +I I TPG ++D+ K +L + VLDEAD M+D GF +I
Sbjct: 285 GPQIRDLERGVEICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLD-MGFEPQIRKI 342
Query: 266 QRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLN-NIRQYYVLC-EHRK 323
+ + Q L++SAT+ V AE + D I + EL+ N NI Q +C E K
Sbjct: 343 VDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEK 402
Query: 324 D-KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQ 382
D K L + + IIF +T+R LT M +DG + G+ + +R ++
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462
Query: 383 RFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKG 442
FR GK +LI T+V +RG+DV+ V V+N+D P E Y+HRIGRT R KG
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS------EDYVHRIGRTARSTNKG 516
Query: 443 LAFNMI---EVDELPSLMKIQDHFNSSI 467
A+ + + L+K+ + N +I
Sbjct: 517 TAYTFFTPGNLKQARELIKVLEEANQAI 544
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 149 bits (377), Expect = 4e-36
Identities = 121/388 (31%), Positives = 187/388 (48%), Gaps = 29/388 (7%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
V F + ++ + F P+ IQ P+ L+ ++++ +Q+G+GKT A++L
Sbjct: 170 VFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSG--RDMVGIAQTGSGKTLAYLL 227
Query: 156 AMLSRVNALELF-----PQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPR 210
+ +N P CL LAPT ELA Q +V + GK C ++ G P+
Sbjct: 228 PAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGG--APK 284
Query: 211 GTDITK-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRI 265
G I +I I TPG ++D+ K +L + VLDEAD M+D GF +I
Sbjct: 285 GPQIRDLERGVEICIATPGRLIDFLESGKT-NLRRCTYLVLDEADRMLD-MGFEPQIRKI 342
Query: 266 QRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLN-NIRQYYVLC-EHRK 323
+ + Q L++SAT+ V AE + D I + EL+ N NI Q +C E K
Sbjct: 343 VDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEK 402
Query: 324 D-KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQ 382
D K L + + IIF +T+R LT M +DG + G+ + +R ++
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462
Query: 383 RFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKG 442
FR GK +LI T+V +RG+DV+ V V+N+D P E Y+HRIGRT R KG
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS------EDYVHRIGRTARSTNKG 516
Query: 443 LAFNMI---EVDELPSLMKIQDHFNSSI 467
A+ + + L+K+ + N +I
Sbjct: 517 TAYTFFTPGNLKQARELIKVLEEANQAI 544
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 149 bits (376), Expect = 6e-36
Identities = 120/381 (31%), Positives = 193/381 (50%), Gaps = 50/381 (13%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
++ F ++ + E ++ I + RP+ +Q+ A+P++ ++L+A +Q+G+GKTAAF+L
Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGK--RDLMACAQTGSGKTAAFLL 234
Query: 156 AMLSRV------NALEL------------FPQCLCLAPTYELALQTGRVVEQMGKFCVDV 197
+LS++ AL+ +P L LAPT ELA+Q + E+ KF
Sbjct: 235 PILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRS 291
Query: 198 QVMYAIRGNRIPRGTDITKQI---------IIGTPGTVLDWCFKLKLIDLTKIRVFVLDE 248
+V + + G DI +QI ++ TPG ++D + K I L + VLDE
Sbjct: 292 RVRPCV----VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDE 346
Query: 249 ADVMIDTQGFSDHSIRI--QRALPSEC--QMLLFSATFEDSVWHFAERIIPDPNVIKLRK 304
AD M+D GF RI Q +P + ++FSATF + A + + + + +
Sbjct: 347 ADRMLD-MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 405
Query: 305 EELTLNNIRQYYVLCEHRKDKYQALCNIYGSI-TIGQAIIFCQTRRNAKWLTVEMIQDGH 363
T NI Q V E DK L +I G+ + ++F +T++ A L + +G+
Sbjct: 406 VGSTSENITQKVVWVEDL-DKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGY 464
Query: 364 QVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEP 423
+ + G+ + R + +FR GK +L+ T V ARG+D+ V V+NFDLP
Sbjct: 465 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLP------S 518
Query: 424 DYETYLHRIGRTGRFGKKGLA 444
D E Y+HRIGRTGR G GLA
Sbjct: 519 DIEEYVHRIGRTGRVGNLGLA 539
>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 149 bits (376), Expect = 6e-36
Identities = 120/381 (31%), Positives = 193/381 (50%), Gaps = 50/381 (13%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
++ F ++ + E ++ I + RP+ +Q+ A+P++ ++L+A +Q+G+GKTAAF+L
Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGK--RDLMACAQTGSGKTAAFLL 234
Query: 156 AMLSRV------NALEL------------FPQCLCLAPTYELALQTGRVVEQMGKFCVDV 197
+LS++ AL+ +P L LAPT ELA+Q + E+ KF
Sbjct: 235 PILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRS 291
Query: 198 QVMYAIRGNRIPRGTDITKQI---------IIGTPGTVLDWCFKLKLIDLTKIRVFVLDE 248
+V + + G DI +QI ++ TPG ++D + K I L + VLDE
Sbjct: 292 RVRPCV----VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDE 346
Query: 249 ADVMIDTQGFSDHSIRI--QRALPSEC--QMLLFSATFEDSVWHFAERIIPDPNVIKLRK 304
AD M+D GF RI Q +P + ++FSATF + A + + + + +
Sbjct: 347 ADRMLD-MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 405
Query: 305 EELTLNNIRQYYVLCEHRKDKYQALCNIYGSI-TIGQAIIFCQTRRNAKWLTVEMIQDGH 363
T NI Q V E DK L +I G+ + ++F +T++ A L + +G+
Sbjct: 406 VGSTSENITQKVVWVEDL-DKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGY 464
Query: 364 QVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEP 423
+ + G+ + R + +FR GK +L+ T V ARG+D+ V V+NFDLP
Sbjct: 465 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLP------S 518
Query: 424 DYETYLHRIGRTGRFGKKGLA 444
D E Y+HRIGRTGR G GLA
Sbjct: 519 DIEEYVHRIGRTGRVGNLGLA 539
>gi|9506931 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Homo sapiens]
Length = 547
Score = 149 bits (376), Expect = 6e-36
Identities = 119/403 (29%), Positives = 198/403 (49%), Gaps = 49/403 (12%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
FE + L LL+ + +G++RP+ IQE A+P LA ++L+A++++G+GKTAA+ + ML
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIP--LALEGKDLLARARTGSGKTAAYAIPML 66
Query: 159 SRV-------NALELFPQCLCLAPTYELALQTGRVVEQMGKFCV-DVQV--MYAIRGNRI 208
+ +E + L L PT ELA Q +++Q+ +C DV+V + A +
Sbjct: 67 QLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAEDSVS 126
Query: 209 PRGTDITK-QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQR 267
R + K +++GTP +L + L + + V+DEAD++ + GF + +
Sbjct: 127 QRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLF-SFGFEEELKSLLC 185
Query: 268 ALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELT-LNNIRQYYVLCEHRKDKY 326
LP Q L SATF + V E I+ +P +KL++ +L + ++Q+ V+CE +DK+
Sbjct: 186 HLPRIYQAFLMSATFNEDVQALKELILHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKF 245
Query: 327 QALCNIYG-SITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFR 385
L + S+ G++++F T + L + + Q +L+GEL + R II +F
Sbjct: 246 LLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLRSRCHIISQFN 305
Query: 386 DGKEKVLITTNV---------------------------CARGIDVKQVTIVVNFDLPVK 418
G +I T+ ARGID V+ V+NFDLP
Sbjct: 306 QGFYDCVIATDAEVLGAPVKGKRRGRGPKGDKASDPEAGVARGIDFHHVSAVLNFDLP-- 363
Query: 419 QGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQD 461
P E Y+HR GRT R G+ + E L KI++
Sbjct: 364 ----PTPEAYIHRAGRTARANNPGIVLTFVLPTEQFHLGKIEE 402
>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
sapiens]
Length = 662
Score = 147 bits (370), Expect = 3e-35
Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 48/380 (12%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
+++F ++ + E ++ I + RP+ +Q+ A+P++ ++L+A +Q+G+GKTAAF+L
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPII--KEKRDLMACAQTGSGKTAAFLL 236
Query: 156 AMLSRVNA------------------LELFPQCLCLAPTYELALQTGRVVEQMGKFCVDV 197
+LS++ + + +P L LAPT ELA+Q + E+ KF
Sbjct: 237 PILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRS 293
Query: 198 QVMYAIRGNRIPRGTDITKQI---------IIGTPGTVLDWCFKLKLIDLTKIRVFVLDE 248
+V + + G DI +QI ++ TPG ++D + K I L + VLDE
Sbjct: 294 RVRPCV----VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDE 348
Query: 249 ADVMIDTQGFSDHSIRI--QRALPSEC--QMLLFSATFEDSVWHFAERIIPDPNVIKLRK 304
AD M+D GF RI Q +P + ++FSATF + A + + + + +
Sbjct: 349 ADRMLD-MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGR 407
Query: 305 EELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQ 364
T NI Q V E + L + + ++F +T++ A L + +G+
Sbjct: 408 VGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA 467
Query: 365 VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPD 424
+ + G+ + R + +FR GK +L+ T V ARG+D+ V V+NFDLP D
Sbjct: 468 CTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLP------SD 521
Query: 425 YETYLHRIGRTGRFGKKGLA 444
E Y+HRIGRTGR G GLA
Sbjct: 522 IEEYVHRIGRTGRVGNLGLA 541
>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
Length = 614
Score = 146 bits (369), Expect = 4e-35
Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 30/381 (7%)
Query: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
V F E ++ I F P+ IQ P+ L+ +++ +Q+G+GKT +++L
Sbjct: 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSG--LDMVGVAQTGSGKTLSYLL 150
Query: 156 AMLSRVNALELF-----PQCLCLAPTYELALQTGRVVEQMGKFC-VDVQVMY--AIRGNR 207
+ +N P CL LAPT ELA Q +V + + C + +Y A +G +
Sbjct: 151 PAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 208 IPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQR 267
I R + +I I TPG ++D+ + +L + VLDEAD M+D GF +I
Sbjct: 211 I-RDLERGVEICIATPGRLIDF-LECGKTNLRRTTYLVLDEADRMLD-MGFEPQIRKIVD 267
Query: 268 ALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLN-NIRQYYVLCEHRKDKY 326
+ + Q L++SAT+ V AE + D I + EL+ N NI Q +C H +K
Sbjct: 268 QIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVC-HDVEKD 326
Query: 327 QALCNIYGSITI---GQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQR 383
+ L + I + I+F +T+R LT +M +DG + G+ + ++R ++
Sbjct: 327 EKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE 386
Query: 384 FRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGL 443
F+ GK +LI T+V +RG+DV+ V V+N+D P E Y+HRIGRT R K G
Sbjct: 387 FKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSS------EDYIHRIGRTARSTKTGT 440
Query: 444 AF------NMIEVDELPSLMK 458
A+ N+ +V +L S+++
Sbjct: 441 AYTFFTPNNIKQVSDLISVLR 461
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 145 bits (367), Expect = 6e-35
Identities = 107/357 (29%), Positives = 182/357 (50%), Gaps = 19/357 (5%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
FE L E L + G+ P+ IQ +P+ L ++++A + +G+GKTAAF+L ++
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLG--RDILASADTGSGKTAAFLLPVI 262
Query: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ- 217
R P L L PT ELA+Q R +++ ++ + + G +P +Q
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 218 --IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQM 275
+II TPG +LD K ++L +++ V+DEAD M+ GF + I +P++CQ
Sbjct: 323 VKVIIATPGRLLD-IIKQSSVELCGVKIVVVDEADTML-KMGFQQQVLDILENIPNDCQT 380
Query: 276 LLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEH--RKDKYQALCNIY 333
+L SAT S+ A +++ +P I ++ L N+RQ + E +K K + N
Sbjct: 381 ILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILN-D 439
Query: 334 GSITIGQAIIFCQTRRNAKWLT--VEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 391
+ ++F + A L+ V+ I +S+ S + +E R +I++ +G +V
Sbjct: 440 KKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIE-RKNILKGLLEGDYEV 498
Query: 392 LITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI 448
+++T V RG+D+ V +VVNFD+P E Y+H+IGR GR G+ G A I
Sbjct: 499 VVSTGVLGRGLDLISVRLVVNFDMPSSMDE------YVHQIGRVGRLGQNGTAITFI 549
>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
[Homo sapiens]
Length = 881
Score = 145 bits (367), Expect = 6e-35
Identities = 105/369 (28%), Positives = 190/369 (51%), Gaps = 21/369 (5%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
F+ + L + KGI G+ P+ IQ +P++L ++++A +++G+GKTA F+L M
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVIL--DGKDVVAMARTGSGKTACFLLPMF 155
Query: 159 SRV--NALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGTD 213
R+ ++ + + L L+PT ELALQT + +++GKF ++ + G+R+
Sbjct: 156 ERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF-TGLKTALILGGDRMEDQFAALH 214
Query: 214 ITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 273
III TPG ++ ++ L L + V DEAD + + GF++ I LP
Sbjct: 215 ENPDIIIATPGRLVHVAVEMSL-KLQSVEYVVFDEADRLFE-MGFAEQLQEIIARLPGGH 272
Query: 274 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKD-KYQALCNI 332
Q +LFSAT + FA + +P +I+L + ++ + L R+D K L ++
Sbjct: 273 QTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLV--REDTKAAVLLHL 330
Query: 333 YGSITI--GQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEK 390
++ Q ++F T+ +A++LT + + + L R + +F GK
Sbjct: 331 LHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCS 390
Query: 391 VLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEV 450
LI T++ ARG+D+ + V+N+ P K + +LHR+GR R G+ G A++++
Sbjct: 391 TLIVTDLAARGLDIPLLDNVINYSFPAKG------KLFLHRVGRVARAGRSGTAYSLVAP 444
Query: 451 DELPSLMKI 459
DE+P L+ +
Sbjct: 445 DEIPYLLDL 453
>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
[Homo sapiens]
Length = 882
Score = 145 bits (367), Expect = 6e-35
Identities = 105/369 (28%), Positives = 190/369 (51%), Gaps = 21/369 (5%)
Query: 99 FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158
F+ + L + KGI G+ P+ IQ +P++L ++++A +++G+GKTA F+L M
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVIL--DGKDVVAMARTGSGKTACFLLPMF 155
Query: 159 SRV--NALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGTD 213
R+ ++ + + L L+PT ELALQT + +++GKF ++ + G+R+
Sbjct: 156 ERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF-TGLKTALILGGDRMEDQFAALH 214
Query: 214 ITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 273
III TPG ++ ++ L L + V DEAD + + GF++ I LP
Sbjct: 215 ENPDIIIATPGRLVHVAVEMSL-KLQSVEYVVFDEADRLFE-MGFAEQLQEIIARLPGGH 272
Query: 274 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKD-KYQALCNI 332
Q +LFSAT + FA + +P +I+L + ++ + L R+D K L ++
Sbjct: 273 QTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLV--REDTKAAVLLHL 330
Query: 333 YGSITI--GQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEK 390
++ Q ++F T+ +A++LT + + + L R + +F GK
Sbjct: 331 LHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCS 390
Query: 391 VLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEV 450
LI T++ ARG+D+ + V+N+ P K + +LHR+GR R G+ G A++++
Sbjct: 391 TLIVTDLAARGLDIPLLDNVINYSFPAKG------KLFLHRVGRVARAGRSGTAYSLVAP 444
Query: 451 DELPSLMKI 459
DE+P L+ +
Sbjct: 445 DEIPYLLDL 453
>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 143 bits (360), Expect = 4e-34
Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 33/397 (8%)
Query: 67 LNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEM 126
+ L Q L++ H++ L+ ++P +F E+L+ I + +P+ IQ
Sbjct: 224 ITNLTPQQLIDLRHKLN-LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQ 282
Query: 127 ALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRV-NALELFPQ----CLCLAPTYELAL 181
+P+ L+ +++I +++G+GKTAAF+ ML + + EL P + + PT EL
Sbjct: 283 GVPVALSG--RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQ 340
Query: 182 QTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ---------IIIGTPGTVLDWCFK 232
Q ++ GK Y +R + G + +Q I++ TPG ++D K
Sbjct: 341 QIHAECKRFGK-------AYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV-K 392
Query: 233 LKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAER 292
K +L ++ V DEAD M D GF I + + Q LLFSATF + A
Sbjct: 393 KKATNLQRVSYLVFDEADRMFD-MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 293 IIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITI-GQAIIFCQTRRNA 351
I+ DP + ++ Q + K+ L T G ++F + NA
Sbjct: 452 ILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANA 511
Query: 352 KWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 411
+ L + Q+GH + LL G++ +R +I F+ VL+ T+V ARG+D+ + V+
Sbjct: 512 EELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVI 571
Query: 412 NFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI 448
N+D+ D +T+ HRIGRTGR G+KG+A+ ++
Sbjct: 572 NYDV------ARDIDTHTHRIGRTGRAGEKGVAYTLL 602
>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 143 bits (360), Expect = 4e-34
Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 33/397 (8%)
Query: 67 LNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEM 126
+ L Q L++ H++ L+ ++P +F E+L+ I + +P+ IQ
Sbjct: 224 ITNLTPQQLIDLRHKLN-LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQ 282
Query: 127 ALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRV-NALELFPQ----CLCLAPTYELAL 181
+P+ L+ +++I +++G+GKTAAF+ ML + + EL P + + PT EL
Sbjct: 283 GVPVALSG--RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQ 340
Query: 182 QTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ---------IIIGTPGTVLDWCFK 232
Q ++ GK Y +R + G + +Q I++ TPG ++D K
Sbjct: 341 QIHAECKRFGK-------AYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV-K 392
Query: 233 LKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAER 292
K +L ++ V DEAD M D GF I + + Q LLFSATF + A
Sbjct: 393 KKATNLQRVSYLVFDEADRMFD-MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 293 IIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITI-GQAIIFCQTRRNA 351
I+ DP + ++ Q + K+ L T G ++F + NA
Sbjct: 452 ILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANA 511
Query: 352 KWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 411
+ L + Q+GH + LL G++ +R +I F+ VL+ T+V ARG+D+ + V+
Sbjct: 512 EELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVI 571
Query: 412 NFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI 448
N+D+ D +T+ HRIGRTGR G+KG+A+ ++
Sbjct: 572 NYDV------ARDIDTHTHRIGRTGRAGEKGVAYTLL 602
>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
[Homo sapiens]
Length = 724
Score = 142 bits (359), Expect = 5e-34
Identities = 117/378 (30%), Positives = 192/378 (50%), Gaps = 37/378 (9%)
Query: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFV 154
++ TFEE L + L I G+ + + +Q+ ++P++LA ++L+A +Q+G+GKTAAF+
Sbjct: 286 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAG--RDLMACAQTGSGKTAAFL 343
Query: 155 LAML----------SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF----CVDVQVM 200
L +L SR L+ P+C+ +APT EL Q + + KF CV V+
Sbjct: 344 LPILAHMMHDGITASRFKELQE-PECIIVAPTRELVNQ---IYLEARKFSFGTCVRAVVI 399
Query: 201 YAIRGNRIPRGTDITKQ---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQG 257
Y G ++ Q I+ TPG ++D K K I L +I+ VLDEAD M+D G
Sbjct: 400 YG--GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLD-MG 455
Query: 258 FSDHSIRIQRA--LPS--ECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIR 313
F ++ +PS + Q L+FSATF + + A + + +
Sbjct: 456 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDV 515
Query: 314 QYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELT 373
Q VL + K + L I +I + ++F +T++ A ++ + Q+ + + G+
Sbjct: 516 QQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDRE 575
Query: 374 VEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIG 433
+R + FR GK VL+ T+V ARG+D++ V V+NFDLP + Y+HRIG
Sbjct: 576 QREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP------STIDEYVHRIG 629
Query: 434 RTGRFGKKGLAFNMIEVD 451
RTGR G G A + +++
Sbjct: 630 RTGRCGNTGRAISFFDLE 647
>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
[Homo sapiens]
Length = 724
Score = 142 bits (359), Expect = 5e-34
Identities = 117/378 (30%), Positives = 192/378 (50%), Gaps = 37/378 (9%)
Query: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFV 154
++ TFEE L + L I G+ + + +Q+ ++P++LA ++L+A +Q+G+GKTAAF+
Sbjct: 286 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAG--RDLMACAQTGSGKTAAFL 343
Query: 155 LAML----------SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF----CVDVQVM 200
L +L SR L+ P+C+ +APT EL Q + + KF CV V+
Sbjct: 344 LPILAHMMHDGITASRFKELQE-PECIIVAPTRELVNQ---IYLEARKFSFGTCVRAVVI 399
Query: 201 YAIRGNRIPRGTDITKQ---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQG 257
Y G ++ Q I+ TPG ++D K K I L +I+ VLDEAD M+D G
Sbjct: 400 YG--GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLD-MG 455
Query: 258 FSDHSIRIQRA--LPS--ECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIR 313
F ++ +PS + Q L+FSATF + + A + + +
Sbjct: 456 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDV 515
Query: 314 QYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELT 373
Q VL + K + L I +I + ++F +T++ A ++ + Q+ + + G+
Sbjct: 516 QQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDRE 575
Query: 374 VEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIG 433
+R + FR GK VL+ T+V ARG+D++ V V+NFDLP + Y+HRIG
Sbjct: 576 QREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP------STIDEYVHRIG 629
Query: 434 RTGRFGKKGLAFNMIEVD 451
RTGR G G A + +++
Sbjct: 630 RTGRCGNTGRAISFFDLE 647
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,895,589
Number of Sequences: 37866
Number of extensions: 700561
Number of successful extensions: 2098
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1827
Number of HSP's gapped (non-prelim): 96
length of query: 483
length of database: 18,247,518
effective HSP length: 106
effective length of query: 377
effective length of database: 14,233,722
effective search space: 5366113194
effective search space used: 5366113194
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.