Guide to the Human Genome
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Name: ZBTB8A Sequence: fasta or formatted (441aa) NCBI GI: 94721342
Description:

zinc finger and BTB domain containing 8A

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         16           2
 C cysteine            2.9         13           1
 D aspartate           6.3         28           2
 E glutamate           7.5         33           5
 F phenylalanine       3.9         17           1
 G glycine             5.0         22           2
 H histidine           4.1         18           1
 I isoleucine          4.3         19           2
 K lysine              7.3         32           2
 L leucine             7.0         31           2
 M methionine          1.6          7           1
 N asparagine          2.7         12           1
 P proline             3.9         17           1
 Q glutamine           6.3         28           2
 R arginine            6.1         27           2
 S serine             13.2         58           3
 T threonine           5.0         22           2
 V valine              5.7         25           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 8A 
ZBTB8B                0.255   zinc finger and BTB domain containing 8B 
ZBTB10                0.169   zinc finger and BTB domain containing 10 isoform b ...
ZBTB46                0.136   zinc finger and BTB domain containing 46 
ZBTB10                0.114   zinc finger and BTB domain containing 10 isoform a ...
ZBTB17                0.112   zinc finger and BTB domain containing 17 
MYNN                  0.100   myoneurin 
BCL6B                 0.083   B-cell CLL/lymphoma 6, member B (zinc finger protein...
ZNF238                0.079   zinc finger protein 238 isoform 2 
ZBTB48                0.079   zinc finger and BTB domain containing 48 
ZBTB3                 0.079   zinc finger and BTB domain containing 3 
ZNF238                0.079   zinc finger protein 238 isoform 1 
ZNF509                0.078   zinc finger protein 509 
ZBTB44                0.073   zinc finger and BTB domain containing 44 
ZBTB43                0.071   zinc finger and BTB domain containing 43 
ZBTB43                0.071   zinc finger and BTB domain containing 43 
HIC2                  0.070   hypermethylated in cancer 2 
ZBTB34                0.068   zinc finger and BTB domain containing 34 
IPP                   0.067   intracisternal A particle-promoted polypeptide isofor...
BACH2                 0.067   BTB and CNC homology 1, basic leucine zipper transcr...
IPP                   0.067   intracisternal A particle-promoted polypeptide isof...
NACC1                 0.065   transcriptional repressor NAC1 
BACH1                 0.064   BTB and CNC homology 1 transcription factor isoform ...
BACH1                 0.064   BTB and CNC homology 1 transcription factor isoform a...
BCL6                  0.063   B-cell lymphoma 6 protein isoform 1 
BCL6                  0.063   B-cell lymphoma 6 protein isoform 2 
BCL6                  0.063   B-cell lymphoma 6 protein isoform 1 
ZBTB7A                0.063   zinc finger and BTB domain containing 7A 
ZBTB11                0.063   zinc finger protein ZNF-U69274 
NACC2                 0.062   BTB (POZ) domain containing 14A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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