Guide to the Human Genome
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Name: ZBTB11 Sequence: fasta or formatted (1053aa) NCBI GI: 166235167
Description:

zinc finger protein ZNF-U69274

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         64           3
 C cysteine            3.5         37           1
 D aspartate           3.6         38           3
 E glutamate           8.8         93           2
 F phenylalanine       2.9         31           2
 G glycine             5.4         57           2
 H histidine           4.6         48           2
 I isoleucine          3.1         33           1
 K lysine              8.9         94           3
 L leucine             7.7         81           2
 M methionine          1.9         20           1
 N asparagine          2.9         31           2
 P proline             3.6         38           2
 Q glutamine           5.6         59           3
 R arginine            6.2         65           3
 S serine              9.0         95           5
 T threonine           5.4         57           3
 V valine              7.0         74           3
 W tryptophan          0.6          6           2
 Y tyrosine            3.0         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein ZNF-U69274 
ZNF658                0.111   zinc finger protein 658 
ZNF569                0.110   zinc finger protein 569 
ZNF93                 0.108   zinc finger protein 93 
ZNF14                 0.107   zinc finger protein 14 
ZNF41                 0.106   zinc finger protein 41 
ZNF41                 0.106   zinc finger protein 41 
ZFP62                 0.106   zinc finger protein 62 homolog 
ZNF585B               0.105   zinc finger protein 585B 
ZNF555                0.105   zinc finger protein 555 
ZNF208                0.105   zinc finger protein 208 
ZNF585A               0.105   zinc finger protein 585A 
ZNF585A               0.105   zinc finger protein 585A 
ZNF484                0.103   zinc finger protein 484 isoform b 
ZNF484                0.103   zinc finger protein 484 isoform a 
ZNF227                0.103   zinc finger protein 227 
ZNF595                0.103   zinc finger protein 595 
ZNF791                0.103   zinc finger protein 791 
ZNF836                0.103   zinc finger protein 836 
ZNF23                 0.103   zinc finger protein 23 
ZNF135                0.102   zinc finger protein 135 
LOC729747             0.102   similar to zinc finger protein 709 
ZNF221                0.101   zinc finger protein 221 
ZNF91                 0.101   zinc finger protein 91 
ZNF599                0.101   zinc finger protein 599 
ZNF596                0.101   zinc finger protein 596 
ZNF596                0.101   zinc finger protein 596 
ZNF596                0.101   zinc finger protein 596 
ZNF708                0.101   zinc finger protein 708 
ZNF665                0.101   zinc finger protein 665 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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