Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFP161 Sequence: fasta or formatted (449aa) NCBI GI: 219689126
Description:

zinc finger protein 161 homolog

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [449aa] zinc finger protein 161 homolog
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         29           3
 C cysteine            3.8         17           1
 D aspartate           7.3         33           3
 E glutamate           9.8         44           2
 F phenylalanine       4.5         20           2
 G glycine             4.7         21           1
 H histidine           4.0         18           2
 I isoleucine          4.2         19           1
 K lysine              9.1         41           2
 L leucine             6.7         30           2
 M methionine          2.7         12           2
 N asparagine          2.7         12           2
 P proline             3.3         15           2
 Q glutamine           4.7         21           2
 R arginine            4.7         21           2
 S serine              8.0         36           3
 T threonine           6.0         27           3
 V valine              4.9         22           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 161 homolog 
ZFP161                1.000   zinc finger protein 161 homolog 
ZBTB17                0.183   zinc finger and BTB domain containing 17 
ZNF596                0.150   zinc finger protein 596 
ZNF596                0.150   zinc finger protein 596 
ZNF596                0.150   zinc finger protein 596 
ZNF235                0.147   zinc finger protein 93 homolog 
ZNF155                0.146   zinc finger protein 155 
ZNF155                0.146   zinc finger protein 155 
ZNF483                0.143   zinc finger protein 483 isoform a 
ZNF667                0.143   zinc finger protein 667 
ZNF429                0.142   zinc finger protein 429 
ZNF317                0.141   zinc finger protein 317 
ZNF234                0.141   zinc finger protein 234 
ZNF234                0.141   zinc finger protein 234 
ZNF713                0.141   zinc finger protein 713 
ZNF675                0.141   zinc finger protein 675 
ZNF184                0.140   zinc finger protein 184 
ZNF677                0.140   zinc finger protein 677 
ZNF14                 0.140   zinc finger protein 14 
ZNF418                0.140   zinc finger protein 418 
LOC388559             0.140   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.140   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.140   PREDICTED: hypothetical protein LOC388559 
ZNF131                0.140   zinc finger protein 131 
ZNF286A               0.139   zinc finger protein 286 
ZNF286A               0.139   zinc finger protein 286 
ZNF540                0.139   zinc finger protein 540 
ZNF568                0.139   zinc finger protein 568 
ZNF233                0.139   zinc finger protein 233 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press