Guide to the Human Genome
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Name: FBXO3 Sequence: fasta or formatted (471aa) NCBI GI: 15812186
Description:

F-box only protein 3 isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [415aa] F-box only protein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         27           2
 C cysteine            3.2         15           2
 D aspartate           7.9         37           3
 E glutamate           9.3         44          10
 F phenylalanine       4.9         23           2
 G glycine             4.9         23           2
 H histidine           2.3         11           1
 I isoleucine          5.5         26           2
 K lysine              4.2         20           2
 L leucine             7.9         37           3
 M methionine          2.5         12           1
 N asparagine          2.1         10           1
 P proline             5.1         24           2
 Q glutamine           3.0         14           2
 R arginine            7.2         34           4
 S serine              6.8         32           2
 T threonine           5.3         25           2
 V valine              5.5         26           2
 W tryptophan          1.3          6           1
 Y tyrosine            5.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 3 isoform 1 
FBXO3                 0.876   F-box only protein 3 isoform 2 
POLDIP2               0.037   DNA polymerase delta interacting protein 2 
MYST4                 0.027   MYST histone acetyltransferase (monocytic leukemia)...
TTBK1                 0.026   tau tubulin kinase 1 
SETD1B                0.026   SET domain containing 1B 
NCL                   0.025   nucleolin 
VPRBP                 0.025   HIV-1 Vpr binding protein 
PELP1                 0.025   proline, glutamic acid and leucine rich protein 1 [...
MYT1                  0.024   myelin transcription factor 1 
LOC645490             0.022   PREDICTED: similar to hCG1991922 
LOC645490             0.022   PREDICTED: similar to hCG1991922 
ANP32B                0.022   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
RANGAP1               0.022   Ran GTPase activating protein 1 
ATAD2                 0.021   ATPase family, AAA domain containing 2 
MTERFD2               0.021   MTERF domain containing 2 
DAXX                  0.021   death-domain associated protein isoform a 
DAXX                  0.021   death-domain associated protein isoform a 
DAXX                  0.021   death-domain associated protein isoform b 
CASZ1                 0.021   castor homolog 1, zinc finger isoform a 
ZBTB4                 0.021   zinc finger and BTB domain containing 4 
ZBTB4                 0.021   zinc finger and BTB domain containing 4 
LOC645490             0.020   PREDICTED: similar to hCG1991922 
LOC728792             0.020   PREDICTED: hypothetical protein 
CALR                  0.020   calreticulin precursor 
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
KIAA1429              0.020   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.020   hypothetical protein LOC25962 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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