Guide to the Human Genome
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Name: POLDIP2 Sequence: fasta or formatted (368aa) NCBI GI: 7661672
Description:

DNA polymerase delta interacting protein 2

Referenced in:

DNA Polymerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         29           3
 C cysteine            1.1          4           1
 D aspartate           4.3         16           2
 E glutamate           6.8         25           1
 F phenylalanine       4.3         16           1
 G glycine             6.2         23           1
 H histidine           4.3         16           1
 I isoleucine          3.0         11           1
 K lysine              3.3         12           1
 L leucine             7.9         29           2
 M methionine          1.1          4           1
 N asparagine          2.4          9           1
 P proline             6.2         23           2
 Q glutamine           4.1         15           1
 R arginine            9.0         33           2
 S serine              8.2         30           2
 T threonine           6.2         23           4
 V valine              7.1         26           2
 W tryptophan          3.0         11           2
 Y tyrosine            3.5         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA polymerase delta interacting protein 2 
FBXO3                 0.047   F-box only protein 3 isoform 1 
FBXO3                 0.047   F-box only protein 3 isoform 2 
NCOR1                 0.005   nuclear receptor co-repressor 1 
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform IV [H...
ARL6IP4               0.005   SRp25 nuclear protein isoform 4 
ARL6IP4               0.005   SRp25 nuclear protein isoform 3 
ARL6IP4               0.005   SRp25 nuclear protein isoform 2 
ARL6IP4               0.005   SRp25 nuclear protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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