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Search of human proteins with 157743286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157743286 transmembrane protein 90A [Homo sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157743286 transmembrane protein 90A [Homo sapiens] 488 e-138
gi|13376347 hypothetical protein LOC79953 [Homo sapiens] 191 4e-49
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens] 98 5e-21
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens] 60 2e-09
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens] 60 2e-09
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens] 59 4e-09
gi|110578660 transmembrane protein 91 isoform b [Homo sapiens] 59 5e-09
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens] 59 5e-09
gi|77681565 NG5 protein [Homo sapiens] 55 7e-08
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 44 2e-04
gi|211904185 hypothetical protein LOC387890 [Homo sapiens] 41 8e-04
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 38 0.009
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 38 0.009
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 38 0.009
gi|21735415 centromere protein B [Homo sapiens] 36 0.033
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 35 0.057
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 35 0.057
gi|5453994 RAD21 homolog [Homo sapiens] 35 0.075
gi|38788260 bromodomain PHD finger transcription factor isoform ... 35 0.075
gi|38788274 bromodomain PHD finger transcription factor isoform ... 35 0.075
gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens] 34 0.097
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 34 0.097
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 34 0.097
gi|116268091 PHD finger protein 23 [Homo sapiens] 34 0.13
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 34 0.13
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 33 0.17
gi|32130516 serologically defined colon cancer antigen 1 [Homo s... 33 0.17
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 33 0.17
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 33 0.17
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 33 0.22
>gi|157743286 transmembrane protein 90A [Homo sapiens]
Length = 238
Score = 488 bits (1256), Expect = e-138
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MESLSELQNPLLPRSPAHLHGPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSL 60
MESLSELQNPLLPRSPAHLHGPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSL
Sbjct: 1 MESLSELQNPLLPRSPAHLHGPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSL 60
Query: 61 QLAVEAWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTV 120
QLAVEAWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTV
Sbjct: 61 QLAVEAWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTV 120
Query: 121 SYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAA 180
SYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAA
Sbjct: 121 SYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAA 180
Query: 181 FYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQNGHG 238
FYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQNGHG
Sbjct: 181 FYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQNGHG 238
>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
Length = 258
Score = 191 bits (486), Expect = 4e-49
Identities = 103/192 (53%), Positives = 135/192 (70%), Gaps = 13/192 (6%)
Query: 53 QLLDPGSLQLAVEAWYRPSCLLGRDKVKEP-----RAGSCETSFTEDREPQEGPPEQPTG 107
QLLDP +LQ +VE+ YRP+ +L + V A CET+F EDR P + E P G
Sbjct: 72 QLLDPNTLQQSVESRYRPNIILYSEGVLRSWGDGVAADCCETTFIEDRSPTKDSLEYPDG 131
Query: 108 P--GQAAENVTIQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLT 165
+A+++ I T+SY V+EE ++ +E ESD +S ++ESEDNFL +PPRDHLGL+
Sbjct: 132 KFIDLSADDIKIHTLSYDVEEE-----EEFQELESDYSS-DTESEDNFLMMPPRDHLGLS 185
Query: 166 LFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVV 225
+FSMLCCFWPLGIAAFY S T+KA++KGD AST+SRRALFLA L+I +G G+YV V
Sbjct: 186 VFSMLCCFWPLGIAAFYLSHETNKAVAKGDLHQASTSSRRALFLAVLSITIGTGVYVGVA 245
Query: 226 VALAAYMSQNGH 237
VAL AY+S+N H
Sbjct: 246 VALIAYLSKNNH 257
>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
Length = 172
Score = 98.2 bits (243), Expect = 5e-21
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMS 233
GIAAF +Q T+KA +KGD + A SRRA L LA+ +G Y A +V LAAY++
Sbjct: 111 GIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLA 167
>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 59.7 bits (143), Expect = 2e-09
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQGT 187
GIAAF +Q T
Sbjct: 111 GIAAFCLAQKT 121
>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 59.7 bits (143), Expect = 2e-09
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQGT 187
GIAAF +Q T
Sbjct: 111 GIAAFCLAQKT 121
>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
Length = 123
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQGTS 188
GIAAF +Q S
Sbjct: 111 GIAAFCLAQKPS 122
>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
Length = 139
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQ 185
GIAAF +Q
Sbjct: 111 GIAAFCLAQ 119
>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
Length = 127
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
Query: 177 GIAAFYFSQ 185
GIAAF +Q
Sbjct: 111 GIAAFCLAQ 119
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 54.7 bits (130), Expect = 7e-08
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 157 PPRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAV 216
PP D++ + + + +CCFWP GI A + + A+++GD A SR A + +++AV
Sbjct: 219 PPHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAV 278
Query: 217 GAGLYV-----AVVVALAAYMSQN 235
G V VV+ +AA +N
Sbjct: 279 GIAAMVLCTILTVVIIIAAQHHEN 302
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 155 TLPPRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAI 214
T PRD++ L + S C WP+ I AF ++ + ++ +GD A R A L+ +A+
Sbjct: 262 TQKPRDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVAL 321
Query: 215 AVGAGLYVA-VVVALAAY 231
G + +A V+ L Y
Sbjct: 322 VGGVLIIIASCVINLGVY 339
>gi|211904185 hypothetical protein LOC387890 [Homo sapiens]
Length = 109
Score = 41.2 bits (95), Expect = 8e-04
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 138 EESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFR 197
+ S +TE + + + +P +++L LT+ S C +P+ I A FS + + + GD+
Sbjct: 15 DSSPEANTEDDKTEEDVPMP-KNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYE 73
Query: 198 LASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQN 235
A R A ++A +I +G + + ++ A + ++N
Sbjct: 74 GARRLGRNAKWVAIASIIIG---LLIIGISCAVHFTRN 108
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 37.7 bits (86), Expect = 0.009
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 76 RDKVKEPRAGSCETSFT-EDREPQEGPPEQPTG---------PGQAAENVTIQTVSYGVQ 125
++ ++P A + E T ++ QE PPE T P + E + G +
Sbjct: 9 KEDEEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEE 68
Query: 126 EELRDQEDDQEEEESDATSTESESED 151
EE ++ED++EEE+ D E E E+
Sbjct: 69 EEEEEEEDEEEEEDDDDDELEDEGEE 94
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 37.7 bits (86), Expect = 0.009
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 76 RDKVKEPRAGSCETSFT-EDREPQEGPPEQPTG---------PGQAAENVTIQTVSYGVQ 125
++ ++P A + E T ++ QE PPE T P + E + G +
Sbjct: 210 KEDEEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEE 269
Query: 126 EELRDQEDDQEEEESDATSTESESED 151
EE ++ED++EEE+ D E E E+
Sbjct: 270 EEEEEEEDEEEEEDDDDDELEDEGEE 295
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 37.7 bits (86), Expect = 0.009
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 76 RDKVKEPRAGSCETSFT-EDREPQEGPPEQPTG---------PGQAAENVTIQTVSYGVQ 125
++ ++P A + E T ++ QE PPE T P + E + G +
Sbjct: 210 KEDEEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEE 269
Query: 126 EELRDQEDDQEEEESDATSTESESED 151
EE ++ED++EEE+ D E E E+
Sbjct: 270 EEEEEEEDEEEEEDDDDDELEDEGEE 295
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 35.8 bits (81), Expect = 0.033
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 85 GSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQED---DQEEEESD 141
G E E+ E +EG E+ G+ E + G +EE+ ++ D D+EEEE +
Sbjct: 405 GEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDE 464
Query: 142 ATSTES-ESED 151
+S+E E+ED
Sbjct: 465 ESSSEGLEAED 475
Score = 32.0 bits (71), Expect = 0.48
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 93 EDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQ-EELRDQEDDQEEEESDATSTESESED 151
E+ E +E E+ G G+ E + G + EEL ++E+ +EE + D+ E E E+
Sbjct: 406 EEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEE 465
Query: 152 N 152
+
Sbjct: 466 S 466
Score = 30.8 bits (68), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 114 NVTIQTVSYGVQEELRDQEDDQEEEESDATSTESESED 151
N TI T EE ++E+++EEEE + E E E+
Sbjct: 394 NATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEE 431
Score = 28.9 bits (63), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 115 VTIQTVSYGVQEELRDQEDDQEEEESDATSTESESED 151
+T S G +EE ++E+++EE E + E E E+
Sbjct: 397 ITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEE 433
Score = 28.1 bits (61), Expect = 7.0
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 94 DREPQEGPPEQPTGPGQAAENVTIQTV-------SYGVQEELR----------------- 129
D + +E E+ + G AE+ V +YG QEE +
Sbjct: 455 DSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDS 514
Query: 130 DQEDDQEEEESDATSTESESEDNFLTLP 157
++EDD+EE++ D + E + + + +P
Sbjct: 515 EEEDDEEEDDEDEDDDDDEEDGDEVPVP 542
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 35.0 bits (79), Expect = 0.057
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 97 PQEGPPEQPTGPGQAA--ENVTIQTVSYGVQEELRDQEDDQEEEESDATSTESESED 151
PQ P P G G A E++T+ ++ +EE ++E+++EEEE + + E E+
Sbjct: 858 PQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEE 914
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 35.0 bits (79), Expect = 0.057
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 125 QEELRDQEDDQEEEESDATSTESESEDNFLTLPPR 159
+EE ++E+++E+EE + E E E+N + PPR
Sbjct: 1078 EEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPR 1112
Score = 30.8 bits (68), Expect = 1.1
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 70 PSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQP-TGPGQAAENVTIQTVSYGVQEEL 128
PS + ++VKE G E+R + P P T PG+ E+ I+ +EE
Sbjct: 1302 PSPIRIEEEVKE--TGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPE----EEEE 1355
Query: 129 RDQEDDQEEEESDATSTE 146
++E+++EEEE + E
Sbjct: 1356 EEEEEEEEEEEEEGEEEE 1373
>gi|5453994 RAD21 homolog [Homo sapiens]
Length = 631
Score = 34.7 bits (78), Expect = 0.075
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 97 PQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQEEEESDATSTESESED 151
P E PPE+P Q ++ + +E+ +++EDD+EEE+ DA+ + + E+
Sbjct: 501 PVELPPEEPPNICQLIPE--LELLPEKEKEKEKEKEDDEEEEDEDASGGDQDQEE 553
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 34.7 bits (78), Expect = 0.075
Identities = 43/164 (26%), Positives = 59/164 (35%), Gaps = 45/164 (27%)
Query: 10 PLLPRSPAHLH-GPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQ---LAVE 65
P P +PA P P P PP S GP G + GS + A +
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTS-------------GPIGGLRSRHRGSSRGRWAAAQ 55
Query: 66 AWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQP----------------TGPG 109
A P + ++ PR GS + R+P PP P TG G
Sbjct: 56 AEVAP-----KTRLSSPRGGS-----SSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGG 105
Query: 110 QAAENVTIQTVSYGVQEEL--RDQEDDQEEEESDATSTESESED 151
++ T + ++ D E ++EEEE D S E E ED
Sbjct: 106 GGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEED 149
Score = 27.7 bits (60), Expect = 9.1
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 26/132 (19%)
Query: 22 PYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQLA-VEAWYRPSCLLGRDKVK 80
P P P PPS S + GG G G G LA A R + D +
Sbjct: 77 PPPPPPAPPSTSAPGR------GGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHE 130
Query: 81 EPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQEEEES 140
E +E+ E ++G E+ Q+ D+ED+ EE++
Sbjct: 131 SEEEEEEEDMVSEEEEEEDGDAEE-------------------TQDSEDDEEDEMEEDDD 171
Query: 141 DATSTESESEDN 152
D+ E +D+
Sbjct: 172 DSDYPEEMEDDD 183
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 34.7 bits (78), Expect = 0.075
Identities = 43/164 (26%), Positives = 59/164 (35%), Gaps = 45/164 (27%)
Query: 10 PLLPRSPAHLH-GPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQ---LAVE 65
P P +PA P P P PP S GP G + GS + A +
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTS-------------GPIGGLRSRHRGSSRGRWAAAQ 55
Query: 66 AWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQP----------------TGPG 109
A P + ++ PR GS + R+P PP P TG G
Sbjct: 56 AEVAP-----KTRLSSPRGGS-----SSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGG 105
Query: 110 QAAENVTIQTVSYGVQEEL--RDQEDDQEEEESDATSTESESED 151
++ T + ++ D E ++EEEE D S E E ED
Sbjct: 106 GGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEED 149
Score = 27.7 bits (60), Expect = 9.1
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 26/132 (19%)
Query: 22 PYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQLA-VEAWYRPSCLLGRDKVK 80
P P P PPS S + GG G G G LA A R + D +
Sbjct: 77 PPPPPPAPPSTSAPGR------GGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHE 130
Query: 81 EPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQEEEES 140
E +E+ E ++G E+ Q+ D+ED+ EE++
Sbjct: 131 SEEEEEEEDMVSEEEEEEDGDAEE-------------------TQDSEDDEEDEMEEDDD 171
Query: 141 DATSTESESEDN 152
D+ E +D+
Sbjct: 172 DSDYPEEMEDDD 183
>gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 93
Score = 34.3 bits (77), Expect = 0.097
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 158 PRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRA----LFLATLA 213
P+D++ ++ L C G+ A +S A+ +GD A SR+A LF
Sbjct: 16 PKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLFG 75
Query: 214 IAVGAGLYVAVVVAL 228
+ V + VVVAL
Sbjct: 76 VFVSTSWVIYVVVAL 90
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 34.3 bits (77), Expect = 0.097
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 158 PRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRA----LFLATLA 213
P+D++ ++ L C G+ A +S A+ +GD A SR+A LF
Sbjct: 211 PKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLFG 270
Query: 214 IAVGAGLYVAVVVAL 228
+ V + VVVAL
Sbjct: 271 VFVSTSWVIYVVVAL 285
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 34.3 bits (77), Expect = 0.097
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 158 PRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRA----LFLATLA 213
P+D++ ++ L C G+ A +S A+ +GD A SR+A LF
Sbjct: 211 PKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLFG 270
Query: 214 IAVGAGLYVAVVVAL 228
+ V + VVVAL
Sbjct: 271 VFVSTSWVIYVVVAL 285
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 33.9 bits (76), Expect = 0.13
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 15/83 (18%)
Query: 76 RDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQ 135
R ++K+ + + + DR P GPP+ P + E ++E+++
Sbjct: 212 RSRIKKSKKRKLKKAERGDRLPPPGPPQAPPSDTDSEEE---------------EEEEEE 256
Query: 136 EEEESDATSTESESEDNFLTLPP 158
EEEE AT E+ L PP
Sbjct: 257 EEEEEMATVVGGEAPVPVLPTPP 279
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 33.9 bits (76), Expect = 0.13
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 76 RDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQ 135
+ KV + + E S + P PPE+ PG + Q E+L + D+
Sbjct: 711 KKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDE 770
Query: 136 EEEESDATSTESES 149
E +++DA +S S
Sbjct: 771 EADDADAAGRDSPS 784
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 33.5 bits (75), Expect = 0.17
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 5 SELQNPLLPRSPAH--LH-GPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQ 61
SE P P SP+H LH GP P Q +++S A P + L L
Sbjct: 627 SETSQPPTPGSPSHSPLHSGPRPRRRESDPTGPQRQVFSV----APPFEVNGLPRAVPLS 682
Query: 62 LAVEAWYRP-------SCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAEN 114
L + + R + LL R + R G T + P P QP G+ E
Sbjct: 683 LPYQDFKRDLSDYRERARLLNRVR----RVGFSHMLLTTPQVPLA--PVQPQANGKEEE- 735
Query: 115 VTIQTVSYGVQEELRDQEDDQEEEESDATSTESESED 151
+ +EE D+E+++EEEE + E E E+
Sbjct: 736 ---EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEE 769
>gi|32130516 serologically defined colon cancer antigen 1 [Homo
sapiens]
Length = 1076
Score = 33.5 bits (75), Expect = 0.17
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 80 KEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQT-----VSYGVQE-ELRDQED 133
KE + + T+D EP + P++P G + ++N+ +T +++ +Q+ + D D
Sbjct: 905 KEEKGKKGKKGKTKD-EPVKKQPQKPRGGQRVSDNIKKETPFLEVITHELQDFAVDDPHD 963
Query: 134 DQEEEESDATSTESESEDNFLTLP-PRDHLGLTLFSMLCC 172
D+EE++ D E D+ P P D L LF++ C
Sbjct: 964 DKEEQDLDQQGNEENLFDSLTGQPHPEDVL---LFAIPIC 1000
Score = 32.3 bits (72), Expect = 0.37
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 88 ETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQEEEESDATSTES 147
+TS ED+E E P E E++T+Q+ + EEL +E ++E E + +
Sbjct: 702 DTSSDEDKEEHETPVEVELMTQVDQEDITLQSGRDELNEELIQEESSEDEGEYEEVRKDQ 761
Query: 148 ES 149
+S
Sbjct: 762 DS 763
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 33.5 bits (75), Expect = 0.17
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 21/150 (14%)
Query: 22 PYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQLAVEAWYRPSCLLGRDKVKE 81
P P +P SW CQ Y LGGA P G DPG + + Y G +
Sbjct: 738 PQPSSFSPSSW-CQGASQDYGLGGASPRG-----DPGLGERDWTSKYGQGAGEGSTREWA 791
Query: 82 PRAG----SCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQE----ELRDQED 133
R G E S ++D+ P G A + V + G Q +++D E
Sbjct: 792 SRCGIGQEEMEASSSQDQSKVSAP-----GVLTAQDRVVGKPAQLGTQRSQEADVQDWEF 846
Query: 134 DQEEEESDATSTESESEDNFLTLPPRDHLG 163
+ + + +S ++E +D RD LG
Sbjct: 847 RKRDSQGTYSSRDAELQDQ--EFGKRDSLG 874
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 33.5 bits (75), Expect = 0.17
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 82 PRAGSCETSFTEDREPQEGPPEQPTGPGQAAE--NVTIQTVSYGVQEELRDQEDDQEEEE 139
P +GS E ED +P GP +A E + S V++ D+ED+ EEE
Sbjct: 457 PGSGSSEDE-DEDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEE 515
Query: 140 ---SDATSTESESEDN 152
+ S ESESE++
Sbjct: 516 ETSGSSASEESESEES 531
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 33.1 bits (74), Expect = 0.22
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 75 GRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAA-ENVTIQTV------SYGVQEE 127
G D + P + S ET F D +GPP PG A +V + S V +
Sbjct: 284 GIDSISSP-SNSEETCFVSD----DGPPSHSLCPGPPALASVPVALADPHRPGSQEVDSD 338
Query: 128 LRDQEDDQEEEESD 141
L +++D++EEEE D
Sbjct: 339 LEEEDDEEEEEEKD 352
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,417,296
Number of Sequences: 37866
Number of extensions: 622864
Number of successful extensions: 5938
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 4296
Number of HSP's gapped (non-prelim): 1169
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.