C20orf39 3210

Name: C20orf39	Sequence: fasta or formatted (258aa)		NCBI GI: 13376347
Description: hypothetical protein LOC79953		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 18 2 C cysteine 1.6 4 2 D aspartate 7.4 19 2 E glutamate 7.0 18 5 F phenylalanine 3.1 8 1 G glycine 5.8 15 1 H histidine 2.7 7 1 I isoleucine 5.4 14 2 K lysine 3.5 9 1 L leucine 10.5 27 2 M methionine 2.7 7 2 N asparagine 3.5 9 2 P proline 4.3 11 2 Q glutamine 3.5 9 2 R arginine 4.7 12 2 S serine 12.0 31 2 T threonine 4.7 12 2 V valine 6.2 16 1 W tryptophan 0.8 2 1 Y tyrosine 3.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79953 TMEM90A 0.339 transmembrane protein 90A TMEM91 0.153 transmembrane protein 91 isoform a TMEM91 0.071 transmembrane protein 91 isoform c TMEM91 0.071 transmembrane protein 91 isoform c PRRT1 0.069 NG5 protein TMEM91 0.067 transmembrane protein 91 isoform b TMEM91 0.067 transmembrane protein 91 isoform d TMEM91 0.067 transmembrane protein 91 isoform e LOC642515 0.041 PREDICTED: similar to NG5 protein LOC642515 0.041 PREDICTED: similar to NG5 protein LOC642515 0.041 PREDICTED: similar to NG5 protein PRRT2 0.035 proline-rich transmembrane protein 2 LOC387890 0.031 hypothetical protein LOC387890 TUSC5 0.027 LOST1 HDAC9 0.016 histone deacetylase 9 isoform 3 HDAC9 0.016 histone deacetylase 9 isoform 2 HDAC9 0.016 histone deacetylase 9 isoform 5 HDAC9 0.016 histone deacetylase 9 isoform 1 HDAC9 0.016 histone deacetylase 9 isoform 4 TAF7 0.014 TATA box-binding protein-associated factor 2F MYST4 0.012 MYST histone acetyltransferase (monocytic leukemia)... IFITM5 0.012 interferon induced transmembrane protein 5 HIPK3 0.010 homeodomain interacting protein kinase 3 isoform 2 ... HIPK3 0.010 homeodomain interacting protein kinase 3 isoform 1 ... DNTTIP2 0.010 deoxynucleotidyltransferase, terminal, interacting p... PABPN1 0.008 poly(A) binding protein, nuclear 1 NBPF6 0.006 neuroblastoma breakpoint family, member 6 isoform 2... NBPF4 0.006 neuroblastoma breakpoint family, member 4 CDC2L2 0.006 cell division cycle 2-like 2 isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.