Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 157671933
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157671933 hypothetical protein LOC168090 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157671933 hypothetical protein LOC168090 [Homo sapiens] 945 0.0
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 43 7e-04
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 42 0.001
gi|215982794 myosin VA isoform 2 [Homo sapiens] 41 0.003
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 40 0.003
gi|109134347 NY-REN-58 antigen [Homo sapiens] 40 0.003
gi|109134355 NY-REN-58 antigen [Homo sapiens] 40 0.003
gi|31542661 transmembrane protein 57 [Homo sapiens] 40 0.006
gi|31982906 cingulin-like 1 [Homo sapiens] 39 0.010
gi|221316624 dystonin isoform 4 [Homo sapiens] 39 0.013
gi|221316622 dystonin isoform 3 [Homo sapiens] 39 0.013
gi|221316618 dystonin isoform 2 [Homo sapiens] 39 0.013
gi|34577047 dystonin isoform 1 [Homo sapiens] 39 0.013
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 39 0.013
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 39 0.013
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 39 0.013
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 39 0.013
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.013
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.013
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.013
gi|118601070 hypothetical protein LOC158724 [Homo sapiens] 39 0.013
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 38 0.017
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 37 0.029
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 37 0.029
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 37 0.039
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 37 0.039
gi|219689136 coiled-coil domain containing 68 [Homo sapiens] 37 0.050
gi|13376818 coiled-coil domain containing 68 [Homo sapiens] 37 0.050
gi|190194355 p90 autoantigen [Homo sapiens] 37 0.050
gi|148234215 guanylate binding protein 4-like [Homo sapiens] 37 0.050
>gi|157671933 hypothetical protein LOC168090 [Homo sapiens]
Length = 469
Score = 945 bits (2442), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MAEEREPELYLKWKHCETPGVKTLCNLKHCETPGVKTLCNLKKLLNRLQKDHREDVYLYI 60
MAEEREPELYLKWKHCETPGVKTLCNLKHCETPGVKTLCNLKKLLNRLQKDHREDVYLYI
Sbjct: 1 MAEEREPELYLKWKHCETPGVKTLCNLKHCETPGVKTLCNLKKLLNRLQKDHREDVYLYI 60
Query: 61 SGHLNPNKLYQPPETILQHWPNAHRPKGERASEVGEPPAGKVARMKEALAHFTIHTALVP 120
SGHLNPNKLYQPPETILQHWPNAHRPKGERASEVGEPPAGKVARMKEALAHFTIHTALVP
Sbjct: 61 SGHLNPNKLYQPPETILQHWPNAHRPKGERASEVGEPPAGKVARMKEALAHFTIHTALVP 120
Query: 121 SEAQDTPLFRYLNPQASLSHTSEEDFLPVEAVREGKEEKKGGPPGRGPPGWRRREELRLP 180
SEAQDTPLFRYLNPQASLSHTSEEDFLPVEAVREGKEEKKGGPPGRGPPGWRRREELRLP
Sbjct: 121 SEAQDTPLFRYLNPQASLSHTSEEDFLPVEAVREGKEEKKGGPPGRGPPGWRRREELRLP 180
Query: 181 DLKVLCYQEAGSRGTRDRHHYVSSYLAGATSADRYRMFLRFQKEVLAKQDLLKNDFTGSK 240
DLKVLCYQEAGSRGTRDRHHYVSSYLAGATSADRYRMFLRFQKEVLAKQDLLKNDFTGSK
Sbjct: 181 DLKVLCYQEAGSRGTRDRHHYVSSYLAGATSADRYRMFLRFQKEVLAKQDLLKNDFTGSK 240
Query: 241 AAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKVKDEYELYMA 300
AAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKVKDEYELYMA
Sbjct: 241 AAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKVKDEYELYMA 300
Query: 301 TLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELE 360
TLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELE
Sbjct: 301 TLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELE 360
Query: 361 MEVALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHT 420
MEVALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHT
Sbjct: 361 MEVALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHT 420
Query: 421 GISDITENRIKSIEHEAIQLETENMILKKKIKGPLEIYQGICKIRGNRR 469
GISDITENRIKSIEHEAIQLETENMILKKKIKGPLEIYQGICKIRGNRR
Sbjct: 421 GISDITENRIKSIEHEAIQLETENMILKKKIKGPLEIYQGICKIRGNRR 469
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 42.7 bits (99), Expect = 7e-04
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 22/235 (9%)
Query: 232 LKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKV 291
L D +K KL++ELQ++ + + ++ E + + L+
Sbjct: 616 LHRDLEQAKEKGERAEKLERELQRLQEENGRLARKVTSLETATEKV--------EALEHE 667
Query: 292 KDEYELYMATLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAAL-- 349
+L TL +S Q +L + + + +++L R M T+TK A
Sbjct: 668 SQGLQLENRTLRKSLDTLQNVSLQLEGLERDNKQLDAENLELRRLVETMRFTSTKLAQME 727
Query: 350 ---EQNDRLRSELEMEVALLQSAKERSE---------SSEKHIIDENRLTLTEKVEKKRC 397
+Q +R + EL V LL++ ++SE S+E + ++ + + K +
Sbjct: 728 RENQQLEREKEELRKNVDLLKALGKKSERLELSYQSVSAENLRLQQSLESSSHKTQTLES 787
Query: 398 EILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEHEAIQLETENMILKKKIK 452
E+ E QAL ++++ + + E K++E E QLE + +L+K+ K
Sbjct: 788 ELGELEAERQALRRDLEALRLANAQLEGAEKDRKALEQEVAQLEKDKKLLEKEAK 842
Score = 29.6 bits (65), Expect = 6.1
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 34/180 (18%)
Query: 298 YMATLLESQPAAQYEALLAQL--------------KALGQRPVKTADMDLAREELRMLVT 343
++ TL E Q +A+YEAL+ Q K LG+R EE ++T
Sbjct: 1173 HLGTLHERQ-SAEYEALIRQHSCLKTLHRNLELEHKELGERHGDMLKRKAELEEREKVLT 1231
Query: 344 ATKAALEQ-----------NDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTEKV 392
+ AL+Q N RLR EL+ L K E H + ++
Sbjct: 1232 TEREALQQEQRTNALAMGENQRLRGELDRVNFLHHQLKGEYEELHAHTKELKTSLNNAQL 1291
Query: 393 EKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEHEAIQLETENMILKKKIK 452
E R + +++DE++ + + +L +N + + LE EN L +I+
Sbjct: 1292 ELNRWQ--ARFDELKEQHQTMDISLTK------LDNHCELLSRLKGNLEEENHHLLSQIQ 1343
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 26/238 (10%)
Query: 216 RMFLRFQKEVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFE 275
R LRF++EV ++D L ++ + + + QQE ++ + + + F + +
Sbjct: 149 RDLLRFKEEVTKERDQLLSEVVKLRESLAQTTEQQQETER---SKEEAEHAISQFQQEIQ 205
Query: 276 DICNSSLIFGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQRPVKTADMDLAR 335
N + + KK K E EL Q A ++ ++KAL Q K ++
Sbjct: 206 QRQNEA--SREFRKKEKLEKEL-------KQIQADMDSRQTEIKALQQYVQK------SK 250
Query: 336 EELRMLVTATKAALEQNDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTEKVEKK 395
EEL+ L K N+R ELE +++AK + E+ + ++ E L+++ ++K
Sbjct: 251 EELQKLEQQLKEQKILNERAAKELEQ--FQMRNAKLQQENEQHSLVCEQ---LSQENQQK 305
Query: 396 RCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEHEAIQLETENMILKKKIKG 453
E+ +K +E+ + +I I + ++ E + ++E LK +I G
Sbjct: 306 ALELKAKEEEVHQMRLDIGKL---NKIREQIHKKLHHTEDQKAEVEQHKETLKNQIVG 360
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 40.8 bits (94), Expect = 0.003
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 26/184 (14%)
Query: 289 KKVKDEY-ELYMATLLESQP------AAQYEALLAQLKALGQRPVKTADMDLAREE---L 338
KK+K+E EL A +S P A Y L+ QL ++ + ++D+ +EE L
Sbjct: 1216 KKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSE------ELDVRKEEVLIL 1269
Query: 339 RMLVTATKAALEQNDRLRSELEMEVAL--LQSAKERSESSEKHI--IDENRLTLTEKVEK 394
R + + K A++ D + + + L +Q K++ E ++ +I + NRL ++ +
Sbjct: 1270 RSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRLLESQLQSQ 1329
Query: 395 KRC---EILSKWDEIQALEKEI--KTTLVHTGISDITENRIK-SIEHEAIQLETENMILK 448
KR E + EIQ+L++E + L+ + E RI+ S++HE +L EN+ L
Sbjct: 1330 KRSHENEAEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLDLM 1389
Query: 449 KKIK 452
++++
Sbjct: 1390 EQLE 1393
Score = 36.6 bits (83), Expect = 0.050
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 49/264 (18%)
Query: 202 VSSYLAGATSADRYRMFLRFQKEVLAKQD----LLKNDFTGSKAAAGHER--------KL 249
+ SYL G + +RYR LR K V+ ++ L + + S A + + K
Sbjct: 844 LQSYLRGFLARNRYRKILREHKAVIIQKRVRGWLARTHYKRSMHAIIYLQCCFRRMMAKR 903
Query: 250 QQELQKICTCSPQQFNRLHV-------------------FGKVFEDICNSSLIFGDLLKK 290
+ + KI S +++ +LH+ + + E + N I+ +K
Sbjct: 904 ELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLVEKLTNLEGIYNSETEK 963
Query: 291 VKDEYELYMATLLESQPAA----QYEALLAQLK-----ALGQRPVKTADMDLAREELRML 341
++ + E + E++ A + +A+L+ ++ D ++E L
Sbjct: 964 LRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQL 1023
Query: 342 VTATKAALEQNDRLRSELE-MEVALLQSAKERSESSEKHIIDENR-LTLTEKVEKKRCEI 399
V+ K E+N L+ E E + ++Q AKE +E+ EK +++E + L L E+ R +
Sbjct: 1024 VSNLK---EENTLLKQEKEALNHRIVQQAKEMTETMEKKLVEETKQLELDLNDERLRYQN 1080
Query: 400 L----SKWDEIQALEKEIKTTLVH 419
L S+ +E KE T +VH
Sbjct: 1081 LLNEFSRLEERYDDLKEEMTLMVH 1104
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 40.4 bits (93), Expect = 0.003
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 246 ERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKVKDEYELYMATLLES 305
+ K+QQ +K+C ++ RLH + S + L+K +E E M
Sbjct: 615 QEKMQQLREKLCQEEEEEILRLH------QQKEQSLSSLRERLQKAIEEEEARM----RE 664
Query: 306 QPAAQYEALLAQLKALGQ------RPVKTADMDLAREELRMLVTATKAALEQNDR----- 354
+ + + L AQ+++ Q R + A + REEL A +A+LEQ +R
Sbjct: 665 EESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQ 724
Query: 355 LRSELE----MEVALLQSAKERSESSEKHIIDENRLTLTEKVEKKR-CEILSKWDEIQAL 409
L+ E+E E A L +AKE++ + ++ R +EK+ E+ ++A
Sbjct: 725 LKEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHSAELERLCSSLEAK 784
Query: 410 EKEIKTTL 417
+E+ ++L
Sbjct: 785 HREVVSSL 792
>gi|109134347 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 40.4 bits (93), Expect = 0.003
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 43/283 (15%)
Query: 220 RFQKEVLAKQDLLKNDFTGSKAAAGHERKLQQE-----LQKICTCSPQQFNRLHVFGKVF 274
R + ++ ++ D L++D KAA H + L E ++K+ + + +L V
Sbjct: 339 RERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEK 398
Query: 275 EDICNSSLIFGDLLK----------KVKDEYELYMATLLESQPAAQYEALLAQLKALGQ- 323
++ N DL K KD+YE + ++ + E +LK Q
Sbjct: 399 LELENR---LADLEKMKVEHDVWRQSEKDQYEEKLRASQMAEEITRKELQSVRLKLQQQI 455
Query: 324 ------RPVKTADMDLAREELRMLVTATKAALEQNDRLRSE---------LEMEVALLQS 368
K + DL ++ + + T A +ND L S L+ E +S
Sbjct: 456 VTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQECRNFRS 515
Query: 369 AKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEI-QALEKEIKTTLVHTGISDITE 427
E+++ + ++E ++ E+ K I + ++ QA EK + + + E
Sbjct: 516 QAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHE 575
Query: 428 NRIKSIEHEAI-------QLETENMILKKKIKGPLEIYQGICK 463
N++K ++ + +LETEN +L ++ P E Y + K
Sbjct: 576 NKLKRLQEKVEVLEAKKEELETENQVLNRQ-NVPFEDYTRLQK 617
>gi|109134355 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 40.4 bits (93), Expect = 0.003
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 43/283 (15%)
Query: 220 RFQKEVLAKQDLLKNDFTGSKAAAGHERKLQQE-----LQKICTCSPQQFNRLHVFGKVF 274
R + ++ ++ D L++D KAA H + L E ++K+ + + +L V
Sbjct: 339 RERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEK 398
Query: 275 EDICNSSLIFGDLLK----------KVKDEYELYMATLLESQPAAQYEALLAQLKALGQ- 323
++ N DL K KD+YE + ++ + E +LK Q
Sbjct: 399 LELENR---LADLEKMKVEHDVWRQSEKDQYEEKLRASQMAEEITRKELQSVRLKLQQQI 455
Query: 324 ------RPVKTADMDLAREELRMLVTATKAALEQNDRLRSE---------LEMEVALLQS 368
K + DL ++ + + T A +ND L S L+ E +S
Sbjct: 456 VTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQECRNFRS 515
Query: 369 AKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEI-QALEKEIKTTLVHTGISDITE 427
E+++ + ++E ++ E+ K I + ++ QA EK + + + E
Sbjct: 516 QAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHE 575
Query: 428 NRIKSIEHEAI-------QLETENMILKKKIKGPLEIYQGICK 463
N++K ++ + +LETEN +L ++ P E Y + K
Sbjct: 576 NKLKRLQEKVEVLEAKKEELETENQVLNRQ-NVPFEDYTRLQK 617
>gi|31542661 transmembrane protein 57 [Homo sapiens]
Length = 664
Score = 39.7 bits (91), Expect = 0.006
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 289 KKVKDEYELYMATLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAA 348
K+V+ E E YM L ++ P Q + L Q K + DMD + ++
Sbjct: 184 KEVQKENEFYMQLLQQALPPEQ-QMLQKQEKEAEEAAKGLPDMDSS------ILIHHNGG 236
Query: 349 LEQNDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQA 408
+ N +L + L E+ + KE+ + ++KH + N + + V+ SK EI+
Sbjct: 237 IPANKKLSTTLP-EIEYREKGKEKDKDAKKHNLGINNNNILQPVD-------SKIQEIEY 288
Query: 409 LEKEIKTTLVHTGISDITENRIK 431
+E I + ++ + TEN +K
Sbjct: 289 MENHINSKRLNNDLVGSTENLLK 311
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 38.9 bits (89), Expect = 0.010
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 213 DRYRMFLRFQKEVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGK 272
+ R + R Q E L K+ LL+ + + L+ + ++ + ++L +
Sbjct: 1019 EELRDYQRAQDEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEM--- 1075
Query: 273 VFEDICNSSLIFGDLLKKVKDEYELYMATLLESQPAAQ-----YEALLAQLKALGQRPVK 327
E+ N+S + + + + +++ E LL+ + A Q +L Q K L R +
Sbjct: 1076 ELEEERNNSDLLSERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIH 1135
Query: 328 T-ADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALLQSAKERSESSEKHII---DE 383
++E L + + A A LE DRL SE E + A LQ + R E K ++ D+
Sbjct: 1136 LEGSYRSSKEGLVVQMEARIAELE--DRLESE-ERDRANLQLSNRRLERKVKELVMQVDD 1192
Query: 384 NRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEHEAIQLETE 443
L+LT++ ++ + + +++ E+EI D E+ K ++ E E
Sbjct: 1193 EHLSLTDQKDQLSLRLKAMKRQVEEAEEEI----------DRLESSKKKLQREL----EE 1238
Query: 444 NMILKKKIKGPL 455
M + + ++G L
Sbjct: 1239 QMDMNEHLQGQL 1250
Score = 35.8 bits (81), Expect = 0.086
Identities = 90/389 (23%), Positives = 152/389 (39%), Gaps = 83/389 (21%)
Query: 136 ASLSHTSEEDFLPVEAVREGKEEKKGGPPGRGPPGWRRREELR--LPDLKVLCYQEAGSR 193
AS S+TSE+D E + +E+ GR RR +L+ + DLK EA ++
Sbjct: 807 ASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKG---DEAKAK 863
Query: 194 GTRDRHHYVSSYLAGATSADRYRMFLRFQKEVLAKQDLLKNDFT---GSKAAAGHERKLQ 250
T ++ L A R + +KE ++ + L+N+ G+ + E+K
Sbjct: 864 ETLKKYEGEIRQLEEALVHAR-----KEEKEAVSARRALENELEAAQGNLSQTTQEQKQL 918
Query: 251 QELQKICTCSPQQFNRLHV--------FGKVFE-------DICNSSLIFGDLLKKVKDEY 295
E K + +Q RL GK E DI +S L+ DEY
Sbjct: 919 SEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEY 978
Query: 296 -ELYMATLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAAL----- 349
E L E Q + + L A+ L ++ +M L EELR A AL
Sbjct: 979 KEKNRRELAEMQRQLKEKTLEAEKSRLTAMKMQD-EMRLMEEELRDYQRAQDEALTKRQL 1037
Query: 350 -------------------EQNDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTE 390
+ RL ++E +V+ L+ E E + ++ E E
Sbjct: 1038 LEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMELEE-ERNNSDLLSERISRSRE 1096
Query: 391 KVEKKRCEILSKWDEIQALE----------KEIKTTLVH-----------------TGIS 423
++E+ R E+L + Q LE K++K+ ++H I+
Sbjct: 1097 QMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGLVVQMEARIA 1156
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIK 452
++ E+R++S E + L+ N L++K+K
Sbjct: 1157 EL-EDRLESEERDRANLQLSNRRLERKVK 1184
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 38.5 bits (88), Expect = 0.013
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 224 EVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLI 283
EVL QD L+ KA KL ++ K + Q RLH E++C
Sbjct: 3628 EVLIIQDKLE----AIKARYKDITKLSTDVAKTLEQALQLARRLH---STHEELCT---- 3676
Query: 284 FGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQR---------PVKTADMDL- 333
L KV+ E Y +L+ + A+Q + +LK + V +A ++L
Sbjct: 3677 ---WLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3733
Query: 334 ---AREELRMLVTATKAALEQNDRLR---SELEMEVALLQSAKERSESSEKHIIDE-NRL 386
ARE L +V E N+R R + +V + +A RS+ ++ E + +
Sbjct: 3734 PWRAREGLEKMVA------EDNERYRLVSDTITQKVEEIDAAILRSQQFDQAADAELSWI 3787
Query: 387 TLTEKVEKKRCEILSKWDEIQALEKEIKT-TLVHTGISDITENRIKSIEHEAIQL--ETE 443
T TEK +I + D+ A + KT T+ DI ++ +KS H+ + E E
Sbjct: 3788 TETEKKLMSLGDIRLEQDQTSAQLQVQKTFTMEILRHKDIIDDLVKS-GHKIMTACSEEE 3846
Query: 444 NMILKKKIKGPLEIYQGICKIRGNR 468
+KKK+ L+ Y IC+I R
Sbjct: 3847 KQSMKKKLDKVLKNYDTICQINSER 3871
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 38.5 bits (88), Expect = 0.013
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 224 EVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLI 283
EVL QD L+ KA KL ++ K + Q RLH E++C
Sbjct: 3639 EVLIIQDKLE----AIKARYKDITKLSTDVAKTLEQALQLARRLH---STHEELCT---- 3687
Query: 284 FGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQR---------PVKTADMDL- 333
L KV+ E Y +L+ + A+Q + +LK + V +A ++L
Sbjct: 3688 ---WLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3744
Query: 334 ---AREELRMLVTATKAALEQNDRLR---SELEMEVALLQSAKERSESSEKHIIDE-NRL 386
ARE L +V E N+R R + +V + +A RS+ ++ E + +
Sbjct: 3745 PWRAREGLEKMVA------EDNERYRLVSDTITQKVEEIDAAILRSQQFDQAADAELSWI 3798
Query: 387 TLTEKVEKKRCEILSKWDEIQALEKEIKT-TLVHTGISDITENRIKSIEHEAIQL--ETE 443
T TEK +I + D+ A + KT T+ DI ++ +KS H+ + E E
Sbjct: 3799 TETEKKLMSLGDIRLEQDQTSAQLQVQKTFTMEILRHKDIIDDLVKS-GHKIMTACSEEE 3857
Query: 444 NMILKKKIKGPLEIYQGICKIRGNR 468
+KKK+ L+ Y IC+I R
Sbjct: 3858 KQSMKKKLDKVLKNYDTICQINSER 3882
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 38.5 bits (88), Expect = 0.013
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 224 EVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLI 283
EVL QD L+ KA KL ++ K + Q RLH E++C
Sbjct: 3777 EVLIIQDKLE----AIKARYKDITKLSTDVAKTLEQALQLARRLH---STHEELCT---- 3825
Query: 284 FGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQR---------PVKTADMDL- 333
L KV+ E Y +L+ + A+Q + +LK + V +A ++L
Sbjct: 3826 ---WLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3882
Query: 334 ---AREELRMLVTATKAALEQNDRLR---SELEMEVALLQSAKERSESSEKHIIDE-NRL 386
ARE L +V E N+R R + +V + +A RS+ ++ E + +
Sbjct: 3883 PWRAREGLEKMVA------EDNERYRLVSDTITQKVEEIDAAILRSQQFDQAADAELSWI 3936
Query: 387 TLTEKVEKKRCEILSKWDEIQALEKEIKT-TLVHTGISDITENRIKSIEHEAIQL--ETE 443
T TEK +I + D+ A + KT T+ DI ++ +KS H+ + E E
Sbjct: 3937 TETEKKLMSLGDIRLEQDQTSAQLQVQKTFTMEILRHKDIIDDLVKS-GHKIMTACSEEE 3995
Query: 444 NMILKKKIKGPLEIYQGICKIRGNR 468
+KKK+ L+ Y IC+I R
Sbjct: 3996 KQSMKKKLDKVLKNYDTICQINSER 4020
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 38.5 bits (88), Expect = 0.013
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 224 EVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLI 283
EVL QD L+ KA KL ++ K + Q RLH E++C
Sbjct: 3599 EVLIIQDKLE----AIKARYKDITKLSTDVAKTLEQALQLARRLH---STHEELCT---- 3647
Query: 284 FGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQR---------PVKTADMDL- 333
L KV+ E Y +L+ + A+Q + +LK + V +A ++L
Sbjct: 3648 ---WLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3704
Query: 334 ---AREELRMLVTATKAALEQNDRLR---SELEMEVALLQSAKERSESSEKHIIDE-NRL 386
ARE L +V E N+R R + +V + +A RS+ ++ E + +
Sbjct: 3705 PWRAREGLEKMVA------EDNERYRLVSDTITQKVEEIDAAILRSQQFDQAADAELSWI 3758
Query: 387 TLTEKVEKKRCEILSKWDEIQALEKEIKT-TLVHTGISDITENRIKSIEHEAIQL--ETE 443
T TEK +I + D+ A + KT T+ DI ++ +KS H+ + E E
Sbjct: 3759 TETEKKLMSLGDIRLEQDQTSAQLQVQKTFTMEILRHKDIIDDLVKS-GHKIMTACSEEE 3817
Query: 444 NMILKKKIKGPLEIYQGICKIRGNR 468
+KKK+ L+ Y IC+I R
Sbjct: 3818 KQSMKKKLDKVLKNYDTICQINSER 3842
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 38.5 bits (88), Expect = 0.013
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 224 EVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLI 283
EVL QD L+ KA KL ++ K + Q RLH E++C
Sbjct: 3273 EVLIIQDKLE----AIKARYKDITKLSTDVAKTLEQALQLARRLH---STHEELCT---- 3321
Query: 284 FGDLLKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQR---------PVKTADMDL- 333
L KV+ E Y +L+ + A+Q + +LK + V +A ++L
Sbjct: 3322 ---WLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3378
Query: 334 ---AREELRMLVTATKAALEQNDRLR---SELEMEVALLQSAKERSESSEKHIIDE-NRL 386
ARE L +V E N+R R + +V + +A RS+ ++ E + +
Sbjct: 3379 PWRAREGLEKMVA------EDNERYRLVSDTITQKVEEIDAAILRSQQFDQAADAELSWI 3432
Query: 387 TLTEKVEKKRCEILSKWDEIQALEKEIKT-TLVHTGISDITENRIKSIEHEAIQL--ETE 443
T TEK +I + D+ A + KT T+ DI ++ +KS H+ + E E
Sbjct: 3433 TETEKKLMSLGDIRLEQDQTSAQLQVQKTFTMEILRHKDIIDDLVKS-GHKIMTACSEEE 3491
Query: 444 NMILKKKIKGPLEIYQGICKIRGNR 468
+KKK+ L+ Y IC+I R
Sbjct: 3492 KQSMKKKLDKVLKNYDTICQINSER 3516
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 406 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 461
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 462 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 519
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 520 D-----NYSHFHELRVTEEEINVLKQDLQNALE 547
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 747 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 806
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 807 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 866
Query: 411 KEIK 414
E+K
Sbjct: 867 AEMK 870
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 395 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 450
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 451 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 508
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 509 D-----NYSHFHELRVTEEEINVLKQDLQNALE 536
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 736 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 795
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 796 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 855
Query: 411 KEIK 414
E+K
Sbjct: 856 AEMK 859
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 374 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 429
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 430 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 487
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 488 D-----NYSHFHELRVTEEEINVLKQDLQNALE 515
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 715 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 774
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 775 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 834
Query: 411 KEIK 414
E+K
Sbjct: 835 AEMK 838
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 403 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 458
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 459 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 516
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 517 D-----NYSHFHELRVTEEEINVLKQDLQNALE 544
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 803
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 804 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 863
Query: 411 KEIK 414
E+K
Sbjct: 864 AEMK 867
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 403 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 458
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 459 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 516
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 517 D-----NYSHFHELRVTEEEINVLKQDLQNALE 544
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 803
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 804 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 863
Query: 411 KEIK 414
E+K
Sbjct: 864 AEMK 867
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.5 bits (88), Expect = 0.013
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 304 ESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEV 363
E+ P + + +LG+ T D D+ ++L+ ++ + LE ++ R +L++E
Sbjct: 403 ETSPPDSKSSPSVLIHSLGK---STTDNDVRIQQLQEILQDLQKRLESSEAERKQLQVE- 458
Query: 364 ALLQSAKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
LQS + I EN L++K+++ + + E+ +++K++K LV
Sbjct: 459 --LQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESM 516
Query: 424 DITENRIKSIEHEAIQLETENMILKKKIKGPLE 456
D S HE E E +LK+ ++ LE
Sbjct: 517 D-----NYSHFHELRVTEEEINVLKQDLQNALE 544
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 308 AAQYEALLAQLKA-LGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALL 366
A + E ++ LK L + V+ A ++ E + +T ++L+S LE EV++L
Sbjct: 744 AKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVL 803
Query: 367 -----QSAKE-----------RSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALE 410
+S KE RSE S+ EN TL + E++ E+L K+ + Q
Sbjct: 804 ASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEEL 863
Query: 411 KEIK 414
E+K
Sbjct: 864 AEMK 867
>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
Length = 791
Score = 38.5 bits (88), Expect = 0.013
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 13/195 (6%)
Query: 71 QPPETILQHWPNAHRPKGERASEV-GEPPAGKVARMKEALAHFTIHTALVPSEAQDTPLF 129
QPPET + H P+ PK R S + +PP + + T T+ + SE T
Sbjct: 469 QPPETQVSH-PHPEHPKTRRRSSLHSQPPKTRRTSSLRSEPPKTRRTSSLRSEPPKTRRT 527
Query: 130 RYLNPQASLSHTSEEDFLPVEAVREGKEEKKGGPPGRGPPGWRRREELRLPDLKVLCYQE 189
L P+ T L E + + P + P + E P ++ +E
Sbjct: 528 SSLGPEP--PKTRRVSSLRPELPKSRRVSSLHPEPPKAPESHQFSEP---PKIRASYIKE 582
Query: 190 AGSRGTRDRHHYVSSYLAGATSADRYRMFLRFQKEVLAKQDLLKN--DFTGSKAAAGHER 247
T VS L ++++ R F ++ ++ A ++ ++N DFT K A HE
Sbjct: 583 LLQEDTPSTKECVSDSLQYRYTSEKLREFFKWAGDLGADEESIRNLFDFT-PKYRATHE- 640
Query: 248 KLQQELQKICTCSPQ 262
Q+ +K+ CS +
Sbjct: 641 --DQKFKKVKECSSE 653
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 38.1 bits (87), Expect = 0.017
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 245 HERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNSSLIFGDLLKKVKDEY--ELYMATL 302
+E KL EL++I + Q+ ++L + + N +L ++ +D E A +
Sbjct: 373 YENKLHDELEQIRLKTNQEIDQLRNASREMYERENRNL------REARDNAVAEKERAVM 426
Query: 303 LESQPAAQYEALLAQLKALG------------QRPVKTADMD---LAREELRMLVTATKA 347
E +++ LL + + L Q +K+ + + L +EE +T +
Sbjct: 427 AEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERVQLLQEETARNLTQCQL 486
Query: 348 ALEQNDRLRSELEMEVALLQSAKER--SESSEKHIIDENRLTLTEKVEKKRCEILSKWDE 405
E+ + L E LQ++ E+ +E ++ + RL + EK+EK+ EI+ + E
Sbjct: 487 ECEKYQKKLEVLTKEFYSLQASSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAE 546
Query: 406 IQALEKEIKTTLVHTG----ISDITENRIKSIEHEA---IQLETENMILKKKIK 452
I+ E E + L G + + R+K H A +QLE +N ++ K ++
Sbjct: 547 IEN-EDEAERVLFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLILKDLE 599
Score = 32.3 bits (72), Expect = 0.95
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 292 KDEYELYMATLLESQPAAQ--YEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAAL 349
+D E A L ES+ A + YE +A + KT + +EL + T +
Sbjct: 338 EDRLERLQAQLEESKKAREEMYEKYVAS-----RDHYKTEYENKLHDELEQIRLKTNQEI 392
Query: 350 EQ-NDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTEK-VEKKRCEILSKWDEIQ 407
+Q + R E E L+ A++ + + ++ R + EK +K ++L ++ E+Q
Sbjct: 393 DQLRNASREMYERENRNLREARDNA------VAEKERAVMAEKDALEKHDQLLDRYRELQ 446
Query: 408 ALEKEIKTTLVHTGISDITENRIKSIEHEAIQLETE 443
+ T +H ++++KS E E +QL E
Sbjct: 447 LSTESKVTEFLH-------QSKLKSFESERVQLLQE 475
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 37.4 bits (85), Expect = 0.029
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 309 AQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLR-SELEMEVALLQ 367
AQ E + L+ +R +K + + E L V++ + + + R ++E E +L
Sbjct: 536 AQLEKTIETLRENSERQIKILEQE--NEHLNQTVSSLRQRSQISAEARVKDIEKENKILH 593
Query: 368 SAKERSESSEKHIIDENRLTLTE----KVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
+ + + S I E R E K + +R E L +E+ LEKE +
Sbjct: 594 ESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELE--NELHHLEKENELLQKKITNL 651
Query: 424 DITENRIKSIEHEAIQLETENMILKKKI 451
IT +I+++E E +LE EN LKK +
Sbjct: 652 KITCEKIEALEQENSELERENRKLKKTL 679
Score = 37.0 bits (84), Expect = 0.039
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 312 EALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSE---LEMEVALLQS 368
E+L + Q ++ +++ +E+L+ + KA+ ++ +RL L++E LQ
Sbjct: 711 ESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQK 770
Query: 369 AKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITEN 428
E S +K+++ E+ E Q L+K ++ + + + E
Sbjct: 771 TLENSN---------------KKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEK 815
Query: 429 RIKSIEHEAIQLETENMILKKKIK 452
KS+E E QLE + L+K+ K
Sbjct: 816 ENKSLEQETSQLEKDKKQLEKENK 839
Score = 35.0 bits (79), Expect = 0.15
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 275 EDICNSSLIFGDLLKKVKDEYELYMATLLESQPAA------QYEALLAQLKALGQRP--- 325
+ + N + DL+K+ K + E + TL E+ + E L + +L QR
Sbjct: 519 QSLQNCQNLSKDLMKE-KAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQIS 577
Query: 326 --VKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALLQSAKERSESSEK---HI 380
+ D++ + L + T + L + + + +++ E+ + ER+E E H+
Sbjct: 578 AEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHL 637
Query: 381 IDENRLTLTEKVEKKRCEILSKWDEIQALEKE----------IKTTLVHTGISDITENRI 430
EN L ++KK + ++I+ALE+E +K TL ++T ++
Sbjct: 638 EKENEL-----LQKKITNLKITCEKIEALEQENSELERENRKLKKTL--DSFKNLTF-QL 689
Query: 431 KSIEHEAIQLETENMILKKKIK 452
+S+E E QL+ EN+ L++ ++
Sbjct: 690 ESLEKENSQLDEENLELRRNVE 711
Score = 33.1 bits (74), Expect = 0.56
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 319 KALGQRPVKTADMDLAREELRMLVTATKAA---LEQNDRLRSELEMEVALLQSAKERSES 375
K + Q + D+++ + L+ + K + LEQ ++ LE E + L+ K++ E
Sbjct: 777 KKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEK 836
Query: 376 SEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEH 435
K L ++ E K + +I LEKE KT GI + R+K +E
Sbjct: 837 ENKR--------LRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGIYKESCVRLKELEK 888
Query: 436 EAIQL 440
E +L
Sbjct: 889 ENKEL 893
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 37.4 bits (85), Expect = 0.029
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 309 AQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLR-SELEMEVALLQ 367
AQ E + L+ +R +K + + E L V++ + + + R ++E E +L
Sbjct: 536 AQLEKTIETLRENSERQIKILEQE--NEHLNQTVSSLRQRSQISAEARVKDIEKENKILH 593
Query: 368 SAKERSESSEKHIIDENRLTLTE----KVEKKRCEILSKWDEIQALEKEIKTTLVHTGIS 423
+ + + S I E R E K + +R E L +E+ LEKE +
Sbjct: 594 ESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELE--NELHHLEKENELLQKKITNL 651
Query: 424 DITENRIKSIEHEAIQLETENMILKKKI 451
IT +I+++E E +LE EN LKK +
Sbjct: 652 KITCEKIEALEQENSELERENRKLKKTL 679
Score = 37.0 bits (84), Expect = 0.039
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 312 EALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSE---LEMEVALLQS 368
E+L + Q ++ +++ +E+L+ + KA+ ++ +RL L++E LQ
Sbjct: 711 ESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQK 770
Query: 369 AKERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITEN 428
E S +K+++ E+ E Q L+K ++ + + + E
Sbjct: 771 TLENSN---------------KKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEK 815
Query: 429 RIKSIEHEAIQLETENMILKKKIK 452
KS+E E QLE + L+K+ K
Sbjct: 816 ENKSLEQETSQLEKDKKQLEKENK 839
Score = 35.0 bits (79), Expect = 0.15
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 275 EDICNSSLIFGDLLKKVKDEYELYMATLLESQPAA------QYEALLAQLKALGQRP--- 325
+ + N + DL+K+ K + E + TL E+ + E L + +L QR
Sbjct: 519 QSLQNCQNLSKDLMKE-KAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQIS 577
Query: 326 --VKTADMDLAREELRMLVTATKAALEQNDRLRSELEMEVALLQSAKERSESSEK---HI 380
+ D++ + L + T + L + + + +++ E+ + ER+E E H+
Sbjct: 578 AEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHL 637
Query: 381 IDENRLTLTEKVEKKRCEILSKWDEIQALEKE----------IKTTLVHTGISDITENRI 430
EN L ++KK + ++I+ALE+E +K TL ++T ++
Sbjct: 638 EKENEL-----LQKKITNLKITCEKIEALEQENSELERENRKLKKTL--DSFKNLTF-QL 689
Query: 431 KSIEHEAIQLETENMILKKKIK 452
+S+E E QL+ EN+ L++ ++
Sbjct: 690 ESLEKENSQLDEENLELRRNVE 711
Score = 33.1 bits (74), Expect = 0.56
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 319 KALGQRPVKTADMDLAREELRMLVTATKAA---LEQNDRLRSELEMEVALLQSAKERSES 375
K + Q + D+++ + L+ + K + LEQ ++ LE E + L+ K++ E
Sbjct: 777 KKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEK 836
Query: 376 SEKHIIDENRLTLTEKVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEH 435
K L ++ E K + +I LEKE KT GI + R+K +E
Sbjct: 837 ENKR--------LRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGIYKESCVRLKELEK 888
Query: 436 EAIQL 440
E +L
Sbjct: 889 ENKEL 893
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 37.0 bits (84), Expect = 0.039
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 70 YQPPETILQHWPNAHRPKGE---------RASEVGEPPAGK-VARMKEALAHFTIHTALV 119
++P L+ WP P E R+ + G PP + R E A T H L+
Sbjct: 712 WEPSGVHLEDWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLL 771
Query: 120 PSEAQDTPLFRYLNPQA------SLSHTSEEDFLPVEAVREGKEEKK 160
+ ++ L +P+ S S + E FLP E EG+EE++
Sbjct: 772 ETALEEEDLASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEE 818
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 37.0 bits (84), Expect = 0.039
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 32/163 (19%)
Query: 310 QYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKAALEQNDRLRSELE-------ME 362
Q +A L ++K++ +R ++EEL V AAL+++ +L+ +LE +
Sbjct: 615 QADAHLKEVKSILER---------SKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKK 665
Query: 363 VALLQS--AKERSESSEKHIIDENRLTLTEK----VEKKRCEILSKWDEIQALEKEIKTT 416
V Q A+ + ++ + I+ EN L K +EK + E+ + EI L+KE
Sbjct: 666 VGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKE---- 721
Query: 417 LVHTGISDITENRIKSIEHEAIQLETENMILKKKIKGPLEIYQ 459
D+ + R++ +E E Q + ++++ + +E Q
Sbjct: 722 ------RDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQ 758
>gi|219689136 coiled-coil domain containing 68 [Homo sapiens]
Length = 335
Score = 36.6 bits (83), Expect = 0.050
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 351 QNDRLRSELEMEVALLQSAK-ERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQAL 409
Q++ +R + E LLQ K E+ + ++H+ EN + EK+E+K +I + +Q +
Sbjct: 141 QSEEVRKKQEDSKQLLQVNKLEKEQKLKQHV--ENLNQVAEKLEEKHSQITELENLVQRM 198
Query: 410 EKEIKTTLVHTGISDITENRIKSIEHEAI------QLETENMILKKKI 451
EKE K TL+ +S EN++ ++ A L+ E IL+++I
Sbjct: 199 EKE-KRTLLERKLS--LENKLLQLKSSATYGKSCQDLQREISILQEQI 243
>gi|13376818 coiled-coil domain containing 68 [Homo sapiens]
Length = 335
Score = 36.6 bits (83), Expect = 0.050
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 351 QNDRLRSELEMEVALLQSAK-ERSESSEKHIIDENRLTLTEKVEKKRCEILSKWDEIQAL 409
Q++ +R + E LLQ K E+ + ++H+ EN + EK+E+K +I + +Q +
Sbjct: 141 QSEEVRKKQEDSKQLLQVNKLEKEQKLKQHV--ENLNQVAEKLEEKHSQITELENLVQRM 198
Query: 410 EKEIKTTLVHTGISDITENRIKSIEHEAI------QLETENMILKKKI 451
EKE K TL+ +S EN++ ++ A L+ E IL+++I
Sbjct: 199 EKE-KRTLLERKLS--LENKLLQLKSSATYGKSCQDLQREISILQEQI 243
>gi|190194355 p90 autoantigen [Homo sapiens]
Length = 905
Score = 36.6 bits (83), Expect = 0.050
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 25/186 (13%)
Query: 288 LKKVKDEYELYMATLLESQPAAQYEALLAQLKALGQRPVKTADMDLAREELRMLVTATKA 347
+ + D YE+ ++TL + Q + L + AL Q A R + +
Sbjct: 619 ISDIMDVYEMKLSTLASKESRLQ-DLLETKALALAQADRLIAQHRCQRTQAETEARTLAS 677
Query: 348 ALEQNDRLRSELEMEVALLQSAKERSESSEKHIIDENR-------------------LTL 388
L + +R EL + + Q ER++S +H+ NR L
Sbjct: 678 MLREVERKNEELSVLLKAQQVESERAQSDIEHLFQHNRKLESVAEEHEILTKSYMELLQR 737
Query: 389 TEKVEKKRCEILSKWDEIQALEKEIKTT-LVHTGISDITENRI-KSIEHEAIQLETENMI 446
E EKK ++ D +L K+I+T ++ + + E I + IE E + E +N +
Sbjct: 738 NESTEKKNKDLQITCD---SLNKQIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQL 794
Query: 447 LKKKIK 452
+ ++ K
Sbjct: 795 VDREHK 800
>gi|148234215 guanylate binding protein 4-like [Homo sapiens]
Length = 638
Score = 36.6 bits (83), Expect = 0.050
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 221 FQKEVLAKQDLLKNDFTGSKAAAGHERKLQQELQKICTCSPQQFNRLHVFGKVFEDICNS 280
FQK+++ + K DF A + Q EL+++ + +R F +
Sbjct: 379 FQKKLVDTMEKKKEDFVLQNEEAS-AKYCQAELKRLSELLTESISRGTFF------VPGG 431
Query: 281 SLIFGDLLKKVKDEYELY----------MATLLESQPAAQYEALLAQLKALGQRPVKTAD 330
I+ + KK++ +Y L + + L+SQ + E++L KAL
Sbjct: 432 HNIYLEAKKKIEQDYTLVPRKGVKADEVLQSFLQSQVVIE-ESILQSDKAL--------- 481
Query: 331 MDLAREELRMLVTATKAALEQNDRLRSELEMEVALLQSAKERSESSEKHIIDENRLTLTE 390
A E+ A K A E+ L + + E + A+ERS EN L +
Sbjct: 482 --TAGEKAIAAKQAKKEAAEKEQELLRQKQKEQQQMMEAQERS-------FQENIAQLKK 532
Query: 391 KVEKKRCEILSKWDEIQALEKEIKTTLVHTGISDITENRIKSIEHEAIQLE 441
K+E++R + + ++ + + ++ L+ G +I E+ + I Q+E
Sbjct: 533 KMERERENYMRELRKMLSHKMKVLEELLTEGFKEIFESLNEEINRLKEQIE 583
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,274,059
Number of Sequences: 37866
Number of extensions: 945880
Number of successful extensions: 4403
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 4125
Number of HSP's gapped (non-prelim): 512
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.