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Search of human proteins with 157426856
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157426856 armadillo repeat containing 5 isoform a [Homo
sapiens]
(935 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 1856 0.0
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 1233 0.0
gi|189409124 armadillo repeat containing 3 [Homo sapiens] 59 2e-08
gi|31657114 armadillo repeat containing 4 [Homo sapiens] 48 5e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 43 0.001
gi|157785645 SPEG complex locus [Homo sapiens] 43 0.002
gi|24497554 homeobox A13 [Homo sapiens] 42 0.002
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 42 0.002
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 42 0.003
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 41 0.005
gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens] 41 0.006
gi|239750595 PREDICTED: similar to hCG2012058 [Homo sapiens] 40 0.008
gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens] 40 0.008
gi|55925608 kelch-like 21 [Homo sapiens] 40 0.008
gi|153070260 myristoylated alanine-rich protein kinase C substra... 40 0.010
gi|15529984 armadillo repeat containing 6 [Homo sapiens] 40 0.010
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 40 0.013
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 40 0.013
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 40 0.013
gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens] 39 0.017
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 39 0.017
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 39 0.017
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 39 0.030
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 39 0.030
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 39 0.030
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 39 0.030
gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo ... 39 0.030
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 39 0.030
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 39 0.030
gi|89257348 homeo box HB9 [Homo sapiens] 39 0.030
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 1856 bits (4808), Expect = 0.0
Identities = 935/935 (100%), Positives = 935/935 (100%)
Query: 1 MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER 60
MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER
Sbjct: 1 MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER 60
Query: 61 FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT 120
FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT
Sbjct: 61 FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT 120
Query: 121 PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN 180
PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN
Sbjct: 121 PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN 180
Query: 181 LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR 240
LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR
Sbjct: 181 LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR 240
Query: 241 PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG 300
PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG
Sbjct: 241 PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG 300
Query: 301 TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI 360
TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI
Sbjct: 301 TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI 360
Query: 361 NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL 420
NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL
Sbjct: 361 NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL 420
Query: 421 CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ 480
CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ
Sbjct: 421 CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ 480
Query: 481 CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG 540
CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG
Sbjct: 481 CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG 540
Query: 541 ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV 600
ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV
Sbjct: 541 ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV 600
Query: 601 APDDWPAPRARPTLHSRHRELGERLLQNLTVQAESPFGVGALTHLLLSGSPEDRVACALT 660
APDDWPAPRARPTLHSRHRELGERLLQNLTVQAESPFGVGALTHLLLSGSPEDRVACALT
Sbjct: 601 APDDWPAPRARPTLHSRHRELGERLLQNLTVQAESPFGVGALTHLLLSGSPEDRVACALT 660
Query: 661 LPFICRKPSLWRRLLLEQGGLRLLLAALTRPAPHPLFLFFAADSLSCLQDLVSPTVSPAV 720
LPFICRKPSLWRRLLLEQGGLRLLLAALTRPAPHPLFLFFAADSLSCLQDLVSPTVSPAV
Sbjct: 661 LPFICRKPSLWRRLLLEQGGLRLLLAALTRPAPHPLFLFFAADSLSCLQDLVSPTVSPAV 720
Query: 721 PQAVPMDLDSPSPCLYEPLLGPAPVPAPDLHFLLDSGLQLPAQRAASATASPFFRALLSG 780
PQAVPMDLDSPSPCLYEPLLGPAPVPAPDLHFLLDSGLQLPAQRAASATASPFFRALLSG
Sbjct: 721 PQAVPMDLDSPSPCLYEPLLGPAPVPAPDLHFLLDSGLQLPAQRAASATASPFFRALLSG 780
Query: 781 SFAEAQMDLVPLRGLSPGAAWPVLHHLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAG 840
SFAEAQMDLVPLRGLSPGAAWPVLHHLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAG
Sbjct: 781 SFAEAQMDLVPLRGLSPGAAWPVLHHLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAG 840
Query: 841 RFLLPGLEEELEEAVGRIHLGPQGGPESVGEVFRLGRPRLAAHCARWTLGSEQCPRKRGL 900
RFLLPGLEEELEEAVGRIHLGPQGGPESVGEVFRLGRPRLAAHCARWTLGSEQCPRKRGL
Sbjct: 841 RFLLPGLEEELEEAVGRIHLGPQGGPESVGEVFRLGRPRLAAHCARWTLGSEQCPRKRGL 900
Query: 901 ALVGLVEAAGEEAGPLTEALLAVVMGIELGARVPA 935
ALVGLVEAAGEEAGPLTEALLAVVMGIELGARVPA
Sbjct: 901 ALVGLVEAAGEEAGPLTEALLAVVMGIELGARVPA 935
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 1233 bits (3191), Expect = 0.0
Identities = 623/623 (100%), Positives = 623/623 (100%)
Query: 1 MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER 60
MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER
Sbjct: 1 MAAAKPTLTDSLSFCLAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIER 60
Query: 61 FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT 120
FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT
Sbjct: 61 FRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPT 120
Query: 121 PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN 180
PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN
Sbjct: 121 PPVRLRKTLDLALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGN 180
Query: 181 LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR 240
LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR
Sbjct: 181 LAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVR 240
Query: 241 PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG 300
PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG
Sbjct: 241 PLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREG 300
Query: 301 TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI 360
TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI
Sbjct: 301 TILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAI 360
Query: 361 NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL 420
NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL
Sbjct: 361 NRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQL 420
Query: 421 CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ 480
CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ
Sbjct: 421 CGEAGEEEEEGREAASWDFPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQ 480
Query: 481 CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG 540
CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG
Sbjct: 481 CPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSG 540
Query: 541 ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV 600
ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV
Sbjct: 541 ALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGV 600
Query: 601 APDDWPAPRARPTLHSRHRELGE 623
APDDWPAPRARPTLHSRHRELGE
Sbjct: 601 APDDWPAPRARPTLHSRHRELGE 623
>gi|189409124 armadillo repeat containing 3 [Homo sapiens]
Length = 872
Score = 59.3 bits (142), Expect = 2e-08
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 132 ALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDI 191
AL+++A+C + ++++ GG+ L++ + IQ A+A+ A +PE+
Sbjct: 253 ALAVIANCLEDMDTMVQIQQTGGLKKLLSFAENSTIPDIQKNAAKAITKAAYDPENRKLF 312
Query: 192 HCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVRPLAELLATAPD 251
H LV L + D + + +A+ + ++ + QG + L +LL + +
Sbjct: 313 HEQEVEKCLVALLGSENDGTKI-AASQAISAMCENSGSKDFFNNQG-IPQLIQLLKSDNE 370
Query: 252 AALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREGTILILANLCAQ 311
A + AL L+ C+ A A + G+ PL++L S + +L N+ Q
Sbjct: 371 EVREAAAL-ALANLTT-CNPANANAAAEADGIDPLINLLSSKRDGAIANAATVLTNMAMQ 428
Query: 312 GLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAINRARLRDAGGL 371
+R + N + ++ LR A+ Q AV + R LR++GGL
Sbjct: 429 EPLRLNIQNHDIMHAIISPLR------SANTVVQSKAALAVTATACDVEARTELRNSGGL 482
Query: 372 DLLMGLLR 379
+ L+ LLR
Sbjct: 483 EPLVELLR 490
Score = 44.7 bits (104), Expect = 4e-04
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 249 APDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRAVREGTILILANL 308
AP+ + + +L + Q+ GGL PL+ L S P V++ ++ + NL
Sbjct: 118 APEEEVVIHEFASLCLANMSAEYTSKVQIFEHGGLEPLIRLLSSPDPDVKKNSMECIYNL 177
Query: 309 CAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAINRARLRDA 368
R L + ++D L+ P Q ++ + ++ + +R LRD
Sbjct: 178 VQDFQCRAKLQELNAIPPILDLLKSEY------PVIQLLALKTLGVIANDKESRTMLRDN 231
Query: 369 GGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALG 411
GLD L+ +L + H +A + L D + ++Q G
Sbjct: 232 QGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTG 274
Score = 33.1 bits (74), Expect = 1.2
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 7/170 (4%)
Query: 161 ILQCMKTDS--IQNRTARALGNLAM-EPESCGDIHCAGAVPLLVESLTACQDSQCLQSVV 217
++Q +K+D+ ++ A AL NL P + A + L+ L++ +D + +
Sbjct: 361 LIQLLKSDNEEVREAAALALANLTTCNPANANAAAEADGIDPLINLLSSKRDG-AIANAA 419
Query: 218 RALRNLADSPQHRLALAQQGAVRPLAELLATAPDAALTLALVRALLELSRGCSRACAEQL 277
L N+A RL + + + L +A + A AL + C +L
Sbjct: 420 TVLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKA---ALAVTATACDVEARTEL 476
Query: 278 SLGGGLGPLVSLASHPKRAVREGTILILANLCAQGLIRPALGNAGGVEVL 327
GGL PLV L VR+ + L L G +++L
Sbjct: 477 RNSGGLEPLVELLRSKNDEVRKHASWAVMVCAGDELTANELCRLGALDIL 526
>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
Length = 1044
Score = 47.8 bits (112), Expect = 5e-05
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 21/252 (8%)
Query: 136 LADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDIHCAG 195
L +CC E R VR+ GGI PLV +L + + N T +A+G A+EPES I
Sbjct: 780 LGECCQERENRVIVRKCGGIQPLVNLLVGINQALLVNVT-KAVGACAVEPESMMIIDRLD 838
Query: 196 AVPLLVESLTACQ---DSQCLQSVVRALRNLADSPQHRLALAQQGAVRPLAELLATAPDA 252
V LL L + ++ ++N D+ + + + G + + LL +
Sbjct: 839 GVRLLWSLLKNPHPDVKASAAWALCPCIKNAKDAGE--MVRSFVGGLELIVNLLKSDNKE 896
Query: 253 ALTLALVRALLELSRGCSRACAEQLSL--GGGLGPLVS-LASHPKRAVREGTILILANLC 309
L ++ A+ +++ E L++ G+ PL+S LA+ +R ++ C
Sbjct: 897 VLA-SVCAAITNIAKD-----QENLAVITDHGVVPLLSKLANTNNNKLRHHLAEAISRCC 950
Query: 310 AQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAINRARLRDAG 369
G R A G V LV L+ D N T+Q A+ L +A N + + G
Sbjct: 951 MWGRNRVAFGEHKAVAPLVRYLKS-NDTNVHRATAQ-----ALYQLSEDADNCITMHENG 1004
Query: 370 GLDLLMGLLRDP 381
+ LL+ ++ P
Sbjct: 1005 AVKLLLDMVGSP 1016
Score = 42.4 bits (98), Expect = 0.002
Identities = 68/276 (24%), Positives = 101/276 (36%), Gaps = 51/276 (18%)
Query: 131 LALSILADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCG- 189
LA +A+ R VR+ GGI LV +L C DS + + +E CG
Sbjct: 554 LAAETIANVAKFKRARRVVRQHGGITKLVALLDCAH-DSTKPAQSSLYEARDVEVARCGA 612
Query: 190 --------------DIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQ 235
I AG +PLL L ++ L VV L+ A +R A+
Sbjct: 613 LALWSCSKSHTNKEAIRKAGGIPLLARLLKTSHENM-LIPVVGTLQECASEENYRAAIKA 671
Query: 236 QGAVRPLAELLATAPDAALTLALVRALLELSRGCSRA---CAEQ------LSLGGGLGPL 286
+ + L + L + + +L C+ A CAE + L GGL PL
Sbjct: 672 ERIIENLVKNLNSENE------------QLQEHCAMAIYQCAEDKETRDLVRLHGGLKPL 719
Query: 287 VSLASHPKRAVREGTILILANLCAQGLIR-PALGNAGGVEVLVDELRQRRDPNGASPTSQ 345
SL ++ R + C+ +E LV L + +
Sbjct: 720 ASLLNNTDNKERLAAVTGAIWKCSISKENVTKFREYKAIETLVGLLTDQ---------PE 770
Query: 346 QPLVRAVCLL---CREAINRARLRDAGGLDLLMGLL 378
+ LV V L C+E NR +R GG+ L+ LL
Sbjct: 771 EVLVNVVGALGECCQERENRVIVRKCGGIQPLVNLL 806
Score = 38.1 bits (87), Expect = 0.039
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 136 LADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDIHCAG 195
++ CC G R + PLV L+ T+ + TA+AL L+ + ++C +H G
Sbjct: 946 ISRCCMWGRNRVAFGEHKAVAPLVRYLKSNDTN-VHRATAQALYQLSEDADNCITMHENG 1004
Query: 196 AVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGA 238
AV LL++ + D ++ + N+ RLALA + A
Sbjct: 1005 AVKLLLD-MVGSPDQDLQEAAAGCISNI-----RRLALATEKA 1041
Score = 35.8 bits (81), Expect = 0.19
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 152 LGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDIHCAGAVPLLVESLTACQDSQ 211
+GG+ +V +L+ + + + A A+ N+A + E+ I G VPLL L +++
Sbjct: 880 VGGLELIVNLLKSDNKEVLASVCA-AITNIAKDQENLAVITDHGVVPLL-SKLANTNNNK 937
Query: 212 CLQSVVRALRNLADSPQHRLALAQQGAVRPLAELLATAPDAALTLALVRALLELSRGCSR 271
+ A+ ++R+A + AV PL L + D + A +AL +LS
Sbjct: 938 LRHHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYL-KSNDTNVHRATAQALYQLSEDADN 996
Query: 272 ACAEQLSLGGGLGPLVSLASHPKRAVREGTILILANL 308
+ G + L+ + P + ++E ++N+
Sbjct: 997 CIT--MHENGAVKLLLDMVGSPDQDLQEAAAGCISNI 1031
Score = 30.8 bits (68), Expect = 6.2
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 17/213 (7%)
Query: 230 RLALAQQGAVRPLAELLATAPDAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSL 289
+LA+ G + L LL T + + ++ L E+S + + + GGL +V++
Sbjct: 487 QLAIRDVGGLEVLINLLET-DEVKCKIGSLKILKEISH--NPQIRQNIVDLGGLPIMVNI 543
Query: 290 ASHPKRAVREGTILILANLCAQGLIRPALGNAGGVEVLVDELRQRRDPNGASPTSQQPLV 349
P ++++ +AN+ R + GG+ LV L D + +S
Sbjct: 544 LDSPHKSLKCLAAETIANVAKFKRARRVVRQHGGITKLVALLDCAHDSTKPAQSSLYEAR 603
Query: 350 RAVCLLC---------REAINRARLRDAGGLDLLMGLLRDPRASAWHPRIVAALVGFLYD 400
C + N+ +R AGG+ LL LL+ H ++ +VG L +
Sbjct: 604 DVEVARCGALALWSCSKSHTNKEAIRKAGGIPLLARLLKTS-----HENMLIPVVGTLQE 658
Query: 401 TGALGRLQALGLVPLLAGQLCGEAGEEEEEGRE 433
+ +A + L E E+ +E
Sbjct: 659 CASEENYRAAIKAERIIENLVKNLNSENEQLQE 691
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 43.1 bits (100), Expect = 0.001
Identities = 114/431 (26%), Positives = 154/431 (35%), Gaps = 89/431 (20%)
Query: 485 PMEPASPAPTPTS-----LRAPRTQRTPGRSPAAAIEEPWGREGPALLL--LSRFSQAPD 537
P+ P +PAP P S + PR TPGR P + L+ L + +P
Sbjct: 1323 PVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPS 1382
Query: 538 PS-GALVTGPA---LYGLLTYVTGAPGP-PSPRALRILSRLTCNPACLEAFVRSYGAALL 592
P A G A + L + PGP SP + N + L + V S + L
Sbjct: 1383 PEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIP-------NSSPLASPVSSTVSVPL 1435
Query: 593 RAWLVLGVAPDDWPAPRARPTLHSRHRELGERLLQNLTVQAESPFGVGALTHLL------ 646
+ L + V P PAP + P L + LTV A P + ++T L
Sbjct: 1436 SSSLPISV-PTTLPAPASAP--------LTIPISAPLTVSASGPALLTSVTPPLAPVVPA 1486
Query: 647 ------LSGSPEDRVACALTLPFICRKPSLWRRLLLEQGGLRLLLAALTRPAPHPLFLFF 700
L+ S A ALTL + PSL + ++ HPL L
Sbjct: 1487 APGPPSLAPSGASPSASALTLG-LATAPSL----------------SSSQTPGHPLLLAP 1529
Query: 701 AADSLSCLQDLVSPTVSPAVPQAVPMDLDSPSPCLYEPLLGPAPVPAPDLHFLLDSGLQL 760
+ + L V+P SP + A L SP P AP PAP + L
Sbjct: 1530 TSSHVPGLNSTVAPACSPVLVPA--SALASPFP--------SAPNPAP-----AQASLLA 1574
Query: 761 PAQRAASATASPFF------RALLSGSFAEAQMDLVPLRGLSPGAA---------WPVLH 805
PA A+ A A+P A+L+ S A L P+ SPGAA PV+
Sbjct: 1575 PASSASQALATPLAPMAAPQTAILAPSPAPPLAPL-PVLAPSPGAAPVLASSQTPVPVMA 1633
Query: 806 HLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAGRFLLPGLEEELEEAVGRIHLGPQGG 865
A+ PVP P L S + L A LP A+ L P G
Sbjct: 1634 PSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPA-LAPTLG 1692
Query: 866 PESVGEVFRLG 876
S + LG
Sbjct: 1693 GSSPSQTLSLG 1703
Score = 38.9 bits (89), Expect = 0.023
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 81 GSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPP 122
G + + A PGS + SG S P GP +A SSS PTPP
Sbjct: 2780 GVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPP 2821
Score = 36.2 bits (82), Expect = 0.15
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 712 VSPTVSPAV---PQAVPMDLDSPSP---CLYEP----LLGPAPVPAPDLHFLLDSGLQLP 761
+ P SPA P P +P P CL P LLGP VP L GL+
Sbjct: 2491 IPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPE 2550
Query: 762 AQRAASATASPFFRALLSGSFAE-AQMDLVPLRGLSPGA 799
A+ A A ASP L S + +E + + LVP + L P A
Sbjct: 2551 AELCAQALASPESLELASVASSETSSLSLVPPKDLLPVA 2589
Score = 31.6 bits (70), Expect = 3.6
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 67 LRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPA--PSAVSSSSP-TPPV 123
+RPLL L+ + SA + PG+AP + +S P+ GPA P + +SSP PV
Sbjct: 1371 VRPLLKLVHSPSPEVSA---SAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPV 1427
Query: 124 RLRKTLDLALSI 135
++ L+ S+
Sbjct: 1428 SSTVSVPLSSSL 1439
Score = 31.6 bits (70), Expect = 3.6
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 474 PDWSPEQCPPEPMEPASPAPTPTSLRAPRTQRT--------PGRSPAA--------AIEE 517
P +P P + ASP P PT + AP + +T P SPA+ A+
Sbjct: 1630 PVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAP 1689
Query: 518 PWGREGPA--LLLLSRFSQAPDPSGALVTGPALYGLLT---YVTGAPGPP 562
G P+ L L + Q P P+ L PA + T ++ APGPP
Sbjct: 1690 TLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPP 1739
Score = 31.6 bits (70), Expect = 3.6
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 84 PSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLR----------KTLDLAL 133
PSQ P S+P+ A +P PA P P+ +P+ P+ L L L L
Sbjct: 2488 PSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGL 2547
Query: 134 SILADCCTEGACRTEVRRLGGI 155
A+ C + E L +
Sbjct: 2548 RPEAELCAQALASPESLELASV 2569
Score = 31.2 bits (69), Expect = 4.7
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 34 ATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLRR-AAAAGSAPSQAGPGSA 92
++++TP LLA + H+ L P AL +A AP+QA +
Sbjct: 1516 SSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAP 1575
Query: 93 PSSAASGASSPAPASGPAPSAVSSSSPTPPV 123
SSA+ ++P +A+ + SP PP+
Sbjct: 1576 ASSASQALATPLAPMAAPQTAILAPSPAPPL 1606
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 42.7 bits (99), Expect = 0.002
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 21 AAAGEALGGEKDPATNE-----TPLSRALLALRTRHIKAAGGIERFRARGGLR-----PL 70
AA+ EA + P N + S+ R RH +A +E AR G R P
Sbjct: 2107 AASSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRLQESPS 2166
Query: 71 LALLRRAA----AAGSAPSQAGPGSAPSSAASGASSPAP---------ASGPAPSAVSSS 117
L+ L A A SAP + P SA SA + + +P P A P P V +S
Sbjct: 2167 LSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRAS 2226
Query: 118 SPTPPVRLRKTLDLALS 134
P PP + +TL L L+
Sbjct: 2227 KPAPPPQALQTLALPLT 2243
Score = 33.5 bits (75), Expect = 0.95
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 474 PDWSPEQCPPEPMEPASPAPTPTSLRAPRTQRTPGRS-------PAAAIEEPWGREGPAL 526
PD P+ P PA P P+ ++L P + R RS PAA P R +
Sbjct: 284 PDLQPQLASEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPV 343
Query: 527 LLLSRFSQAPDPSGALVTGPALYGLLTYVTGAPGPPSPRALRILSRLTCNPACLEA 582
L ++ + +GP+L G P P A LS L +P + A
Sbjct: 344 LPEDTTTEEKRGKKSKSSGPSLAGT---AESRPQTPLSEASGRLSALGRSPRLVRA 396
Score = 32.7 bits (73), Expect = 1.6
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 21/146 (14%)
Query: 2 AAAKPTLTDSLSFCLAQLAAA--------AGEALGGEKDPATNETP------------LS 41
A +P L LS L+Q A EA GG+ + + + LS
Sbjct: 2399 AVGEPGLVRRLSLSLSQRLRRTPPAQRHPAWEARGGDGESSEGGSSARGSPVLAMRRRLS 2458
Query: 42 RALLALRTRHIKAAGGIERFRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGAS 101
L L +R ++ + A G PL LRRA + G + + G +A +GA+
Sbjct: 2459 FTLERLSSRLQRSGSSEDSGGASGRSTPLFGRLRRATSEGESLRRLGLPHNQLAAQAGAT 2518
Query: 102 SPAPAS-GPAPSAVSSSSPTPPVRLR 126
+P+ S G SA S SS R R
Sbjct: 2519 TPSAESLGSEASATSGSSAPGESRSR 2544
Score = 30.4 bits (67), Expect = 8.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 78 AAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTL 129
A S P++A P +P+S A + AP P+ + SS PTPP + +L
Sbjct: 2785 APVTSRPARARPPDSPTSLAPPLAPAAPTP-PSVTVSPSSPPTPPSQALSSL 2835
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 17 AQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLRR 76
A AAAAG GG PA A A + AA A R L+A
Sbjct: 45 AAAAAAAGAGGGGFPHPA--------AAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAP 96
Query: 77 AAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTP 121
A ++ + PG AP SAA+ A++ A A+ A +A SS P P
Sbjct: 97 LAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGP 141
Score = 30.4 bits (67), Expect = 8.0
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 16 LAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLR 75
LA AA+A + GE P+ + A A ++GG G A +
Sbjct: 97 LAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGG----PGPAGPAGAEAAKQ 152
Query: 76 RAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSS 116
+ + +A S +GP + P P GP P+A+ S
Sbjct: 153 CSPCSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKS 193
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 18 QLAAAAGEALGGEKDPATNE-TPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLRR 76
QL +++G+ G P +PL R A AA A P AL
Sbjct: 466 QLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPAL--- 522
Query: 77 AAAAGSAPSQAGPGSAPSSAASGASSPAPASGPA----PSAVSSSSPT 120
AA +AP+ A +AP+ AA+ A +PAPA+ PA P+A +S++P+
Sbjct: 523 --AAAAAPALAA-AAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPS 567
Score = 38.9 bits (89), Expect = 0.023
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 72 ALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTP 121
A + AAAA +A + A +AP+ A + A++PA A+ AP+ ++++P P
Sbjct: 497 AAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAP 546
Score = 36.2 bits (82), Expect = 0.15
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 2 AAAKPTLTDSLSFCLAQLAA---AAGEALGGEKDPATNETPLSRALLALR--------TR 50
AAA P L + + A AA AA A P+ ++ P + A R T+
Sbjct: 532 AAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSVPLIQASRPCPAAQPPTK 591
Query: 51 HIKAAGGIERFRARGGLRPLLAL--LRRAAAAGSA--PSQAGPGSAPSSAASGASSPAPA 106
IK A I+ GL+ + ++ A A GS+ P QA AP+ A S +
Sbjct: 592 FIKIAPAIQLRTGSTGLKAINVEGPVQGAQALGSSFKPVQAPGSGAPAPAGISGSDLQSS 651
Query: 107 SGPAPSA----VSSSSPTP 121
GP P A V +SSP P
Sbjct: 652 GGPLPDARPGAVQASSPAP 670
Score = 35.0 bits (79), Expect = 0.33
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 77 AAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTP 121
AAAA +A + A AP+ AA+ A + A A+ PA +A ++ +P P
Sbjct: 504 AAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAP 548
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 457 RSWLISEGYATGPDDISPDWSPE--QCPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAA 514
R W ++ + P P CP P+ P S A +PTS APR R P P
Sbjct: 231 RLWFVNPIFIEDCSSALPTDQPPLGNCPARPLPPTSDATSPTSRWAPR--RPPPPPPVLP 288
Query: 515 IEEPWGREGPALLLLSRFSQAPDPSGALVTGPALYGLLTYVTGAPGPPSPRALRILSRLT 574
++ + P L L+ P P+ V P + + G P P+ + RL
Sbjct: 289 LQPCSPAQPPVLPALAPAPACPLPTSPPVPAP---HVTPHAPGPPDHPNQPPMMTCERLP 345
Query: 575 CNPACL 580
C A L
Sbjct: 346 CPTAGL 351
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 41.2 bits (95), Expect = 0.005
Identities = 63/207 (30%), Positives = 81/207 (39%), Gaps = 35/207 (16%)
Query: 63 ARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPA------SGP---APSA 113
A +RP A AA A P+ AGP SA S A+ PAPA +GP AP+
Sbjct: 20 APAAVRPPAAGPPAAAPAVVYPAAAGP-SAASLCAANPLVPAPAAVRPPVAGPPATAPAV 78
Query: 114 VSSSSPTP-PVRLRKTLDLALSILADCCTEGACRTEVRRLGGILP--LVTILQCMKTDSI 170
V ++ P LR LA++ A R LG P + C S
Sbjct: 79 VCPAAAGPSAASLRAANPLAVA-------PAAVRRPAATLGAASPAAVAPAAVCPAAASP 131
Query: 171 QNRTARALGNLAMEPESCGDIHCAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHR 230
+ A A P + A A PL V A + C+QSV A+SP
Sbjct: 132 SAASLCAASPTAAAPAAASP---AAAAPLAVNPAAAAPAAACVQSV-------AESPATP 181
Query: 231 LALAQQGAVRPLAELLATAPDAALTLA 257
LA+AQ P++ A AP A LA
Sbjct: 182 LAIAQ-----PVSSPAAPAPCAVPPLA 203
Score = 30.8 bits (68), Expect = 6.2
Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 491 PAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSGALVTGPALYG 550
PA P ++R P P +PA G +L + AP V GP
Sbjct: 17 PAAAPAAVRPPAAG-PPAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAGPPATA 75
Query: 551 LLTYVTGAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGVAP 602
A GP S +LR + L PA + + GAA A V P
Sbjct: 76 PAVVCPAAAGP-SAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVCP 126
>gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens]
Length = 378
Score = 40.8 bits (94), Expect = 0.006
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 748 PDLHFLLDSGLQLPAQRAASATASPFFRALLSGSFAEAQMDLVPLRGLSPGAAWPVLHHL 807
PD+ +D G + A RA + S +F A+LSG +AE+ + V L+G+S ++H +
Sbjct: 206 PDIDIFVD-GKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFI 264
Query: 808 HGCRGCGAALGPVPPPGQPLLGSEAEEALEAAGRFLLPGLEE 849
+G G + P + +G + L A + L GL+E
Sbjct: 265 YG--------GTLDIPDKTNVG----QILNMADMYGLEGLKE 294
>gi|239750595 PREDICTED: similar to hCG2012058 [Homo sapiens]
Length = 173
Score = 40.4 bits (93), Expect = 0.008
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Query: 793 RGLSPGAAWPVLHHLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAGRFLLPGL--EEE 850
RG SP W A G + G+P+ G + E +GR+ G E+
Sbjct: 45 RGHSPWRGWDPGSRGSVTAAWATACGDLTFLGKPM-GQRSREIQAPSGRYGRTGAFAVEK 103
Query: 851 LEEAVGRIHLGPQGGPESVGEV-FRLGRPRLAAHCARWTLGSEQ-----CPRKRGLALVG 904
L +VG+ G +G + G + L RP + HCA W LG + C + G A +G
Sbjct: 104 LGVSVGKERNGSRGSSGAPGNAAYTLPRPPPSVHCAAWVLGQPEGRRLPCKARWGPACLG 163
Query: 905 L 905
L
Sbjct: 164 L 164
>gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]
Length = 1888
Score = 40.4 bits (93), Expect = 0.008
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 19 LAAAAGEALGGEKDPATNETPLSRALL--ALRTRHIKAAGGIERFRARGGLRPLLALLRR 76
+AAAA A+GG++ P+ E P L A H+KAA + R R G L ALL R
Sbjct: 1 MAAAAAAAVGGQQ-PSQPELPAPGLALDKAATAAHLKAA--LSRPDNRAGAEELQALLER 57
Query: 77 AAAAGSAPSQAGPGSAPSSAASGASSPAPASGPA 110
+A P A G ++AA G P A A
Sbjct: 58 VLSA-ERPLAAAAGGEDAAAAGGGGGPGAAEEEA 90
>gi|55925608 kelch-like 21 [Homo sapiens]
Length = 597
Score = 40.4 bits (93), Expect = 0.008
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 757 GLQLPAQRAASATASPFFRALLSGSFAEAQMDLVPLRGLSPGAAWPVLHHLHGCRGCGAA 816
G PA RA A ASP+FRA+ +G E++ + V L G+ P +L + R
Sbjct: 44 GRDFPAHRAVLAAASPYFRAMFAGQLRESRAERVRLHGVPPDMLQLLLDFSYTGR----- 98
Query: 817 LGPVPPPGQPLLGSEAEEALEAAGRFLLPGLEE 849
+ G AE L AA P ++E
Sbjct: 99 --------VAVSGDNAEPLLRAADLLQFPAVKE 123
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 40.0 bits (92), Expect = 0.010
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 19/96 (19%)
Query: 26 ALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLRRAAAAGSAPS 85
A+ EK PA++ET + + + + AG +AAA APS
Sbjct: 243 AVAPEKPPASDETKAAEEPSKVEEKKAEEAGA-------------------SAAACEAPS 283
Query: 86 QAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTP 121
AGPG+ P A+ A PA A+ + A S P
Sbjct: 284 AAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQP 319
Score = 32.3 bits (72), Expect = 2.1
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Query: 21 AAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLRRAAAA 80
AA GEA A + S+A H+K G A G + L A
Sbjct: 9 AAKGEAAAERPGEAAVASSPSKAN-GQENGHVKVNGDASPAAAESGAKEELQ------AN 61
Query: 81 GSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSS 116
GSAP A P++A SGA+SP+ A P+A ++
Sbjct: 62 GSAP--AADKEEPAAAGSGAASPSAAEKGEPAAAAA 95
>gi|15529984 armadillo repeat containing 6 [Homo sapiens]
Length = 476
Score = 40.0 bits (92), Expect = 0.010
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 178 LGNLAMEPESCGDIHCAGAVPLLVESLTACQDSQ---------CLQSVVRALRNLADSPQ 228
L LA+ E C ++ G + +LV L C D Q ++ V+ LR +A +
Sbjct: 275 LSRLAIRNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDD 334
Query: 229 HRLALAQQGAVRPLAELLA---TAPDAALTLALVRALLELSR-GCSRACAEQLSLGGGLG 284
+ A+ + G + + T+P L L + SR E GG +
Sbjct: 335 VKDAIVRAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEG---GGAVA 391
Query: 285 PLVSLASHPKRA-VREGTILILANLCAQG--LIRPALGNAGGVEVLVDELR 332
L ++ +HP++A V++ +++ NL A G +P L G E L+ + R
Sbjct: 392 ALQAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDL--GAEALIMQAR 440
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 39.7 bits (91), Expect = 0.013
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 73 LLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPP 122
L+RR AAA P++A P AP + A+GA +P+ P P+A S + P P
Sbjct: 26 LVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAA-SPAGPEEP 74
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 456 LRSWL-ISEGYATGPDDISPDWSPEQCPPEPMEP--ASPAPTPTSLRAPRTQRTPGRSPA 512
L +WL + G A P+ P + PPEP P A+ AP P+ AP P SPA
Sbjct: 21 LLAWLLVRRGAAASPE-------PARAPPEPAPPAEATGAPAPSRPCAPE----PAASPA 69
Query: 513 AAIEEP 518
EEP
Sbjct: 70 GP-EEP 74
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 39.7 bits (91), Expect = 0.013
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 73 LLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPP 122
L+RR AAA P++A P AP + A+GA +P+ P P+A S + P P
Sbjct: 26 LVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAA-SPAGPEEP 74
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 456 LRSWL-ISEGYATGPDDISPDWSPEQCPPEPMEP--ASPAPTPTSLRAPRTQRTPGRSPA 512
L +WL + G A P+ P + PPEP P A+ AP P+ AP P SPA
Sbjct: 21 LLAWLLVRRGAAASPE-------PARAPPEPAPPAEATGAPAPSRPCAPE----PAASPA 69
Query: 513 AAIEEP 518
EEP
Sbjct: 70 GP-EEP 74
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 39.7 bits (91), Expect = 0.013
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 73 LLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPP 122
L+RR AAA P++A P AP + A+GA +P+ P P+A S + P P
Sbjct: 26 LVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAA-SPAGPEEP 74
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 456 LRSWL-ISEGYATGPDDISPDWSPEQCPPEPMEP--ASPAPTPTSLRAPRTQRTPGRSPA 512
L +WL + G A P+ P + PPEP P A+ AP P+ AP P SPA
Sbjct: 21 LLAWLLVRRGAAASPE-------PARAPPEPAPPAEATGAPAPSRPCAPE----PAASPA 69
Query: 513 AAIEEP 518
EEP
Sbjct: 70 GP-EEP 74
>gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens]
Length = 189
Score = 39.3 bits (90), Expect = 0.017
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 64 RGGLRPLLALLRRAAA--AGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTP 121
RG P A L RAAA A + + A P P+SAA SP P SG AP A ++ TP
Sbjct: 128 RGSKTPAPARLGRAAATAATATTAAAAPQCGPASAAP-PPSPPPRSGTAPPANRTAPATP 186
Query: 122 PVR 124
P R
Sbjct: 187 PGR 189
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 39.3 bits (90), Expect = 0.017
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 77 AAAAGSAPSQAGPGSAPSSAASGAS----SPAPASGPAPSAVSSSSPTPPVRLRKT 128
AA++GSA + + P ++ + +G + +PAPAS PAP + P PP L T
Sbjct: 69 AASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDT 124
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 39.3 bits (90), Expect = 0.017
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 77 AAAAGSAPSQAGPGSAPSSAASGAS----SPAPASGPAPSAVSSSSPTPPVRLRKT 128
AA++GSA + + P ++ + +G + +PAPAS PAP + P PP L T
Sbjct: 69 AASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDT 124
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 38.5 bits (88), Expect = 0.030
Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 30/199 (15%)
Query: 378 LRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQLCGEAGEEEEEGREAASW 437
LR PR +A P A G R G P A + G + + EAAS
Sbjct: 111 LRQPRPAARAPEGALASCGL--------RAGWAGWPPQAAWRAWGASVDAAAPPSEAASA 162
Query: 438 D--FPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQCPPEPMEPASPAPTP 495
+ PE P R G +++ +++ + +PDW+PE CP E SP P
Sbjct: 163 EARLPERSGPARRPGPECVPMKAPGLAQAAVA---EETPDWAPELCPSS--EARSPEPPA 217
Query: 496 TSLRAPRTQRTPGRSPAA-----AIEEPWGREGPALLLL------SRFSQAPDPSGAL-- 542
L+ T T G+ A E G+E P LL +R SQ P + L
Sbjct: 218 NRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVG 277
Query: 543 --VTGPALYGLLTYVTGAP 559
VT P L + V P
Sbjct: 278 LHVTSPQLLRVQPLVRTEP 296
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 38.5 bits (88), Expect = 0.030
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 69 PLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRL 125
PL L + ++ S+PS + P S+PSS SSP P P PS SSSS + P L
Sbjct: 169 PLFLLPSSSPSSSSSPSYSSPSSSPSS-----SSPLPPPPPPPSFSSSSSSSFPFLL 220
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.030
Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 30/199 (15%)
Query: 378 LRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQLCGEAGEEEEEGREAASW 437
LR PR +A P A G R G P A + G + + EAAS
Sbjct: 124 LRQPRPAARAPEGALASCGL--------RAGWAGWPPQAAWRAWGASVDAAAPPSEAASA 175
Query: 438 D--FPEERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQCPPEPMEPASPAPTP 495
+ PE P R G +++ +++ + +PDW+PE CP E SP P
Sbjct: 176 EARLPERSGPARRPGPECVPMKAPGLAQAAVA---EETPDWAPELCPSS--EARSPEPPA 230
Query: 496 TSLRAPRTQRTPGRSPAA-----AIEEPWGREGPALLLL------SRFSQAPDPSGAL-- 542
L+ T T G+ A E G+E P LL +R SQ P + L
Sbjct: 231 NRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVG 290
Query: 543 --VTGPALYGLLTYVTGAP 559
VT P L + V P
Sbjct: 291 LHVTSPQLLRVQPLVRTEP 309
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 38.5 bits (88), Expect = 0.030
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 69 PLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRL 125
PL L + ++ S+PS + P S+PSS SSP P P PS SSSS + P L
Sbjct: 169 PLFLLPSSSPSSSSSPSYSSPSSSPSS-----SSPLPPPPPPPSFSSSSSSSFPFLL 220
>gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo
sapiens]
Length = 2146
Score = 38.5 bits (88), Expect = 0.030
Identities = 59/230 (25%), Positives = 79/230 (34%), Gaps = 40/230 (17%)
Query: 361 NRARLRDA-GGLDLLMGLLRDPRASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQ 419
+RA L A GGL L AW R+ A GR+ A L P+ G
Sbjct: 651 SRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAG-----------GRVAASLLSPVAFGF 699
Query: 420 LCGEAGEEEEEGREAASWDF----PEERTPERAQ-------GGSFRSLRSWLISEGYATG 468
C EE+G E A W P AQ + L +W + E G
Sbjct: 700 GCESLALLEEQG-EGAQWHNVGTRPTADVFSLAQVSGLLLLDAALYGLATWYL-EAVCPG 757
Query: 469 PDDISPDWS-----PEQCPPEPMEPASPAPTPTSLRAPRTQRTPGRSPAAAIEEPWGREG 523
I W+ C P P + +P PTP + + PG SP ++
Sbjct: 758 QYGIPEPWNFPFRRSYWCGPRPPKSPAPCPTPLDPKVLVEEAPPGLSPGVSVRS------ 811
Query: 524 PALLLLSRFSQAPDPSGALVTGPALYGLLTYVTGAPGPPSPRALRILSRL 573
L RF +P P+ ++ G +T G G L ILS L
Sbjct: 812 ----LEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGL 857
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 38.5 bits (88), Expect = 0.030
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 80 AGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKT 128
+GS Q PGS S AS SSP AS P A +S P PPV+ R T
Sbjct: 472 SGSPQQQRSPGSPQLSRASSGSSPNQAS--KPGATLASQPRPPVQGRST 518
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 38.5 bits (88), Expect = 0.030
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 80 AGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKT 128
+GS Q PGS S AS SSP AS P A +S P PPV+ R T
Sbjct: 473 SGSPQQQRSPGSPQLSRASSGSSPNQAS--KPGATLASQPRPPVQGRST 519
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 38.5 bits (88), Expect = 0.030
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 52 IKAAGGIERFRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAP 111
I A ++ RA LAL+ AAA S G G S SG+ SPA + PA
Sbjct: 9 IDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAA 68
Query: 112 SA--VSSSSPTPP 122
A + + SP+PP
Sbjct: 69 PADRLRAESPSPP 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,966,649
Number of Sequences: 37866
Number of extensions: 2522276
Number of successful extensions: 27599
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 576
Number of HSP's that attempted gapping in prelim test: 21320
Number of HSP's gapped (non-prelim): 6009
length of query: 935
length of database: 18,247,518
effective HSP length: 112
effective length of query: 823
effective length of database: 14,006,526
effective search space: 11527370898
effective search space used: 11527370898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.