Guide to the Human Genome
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Name: BTBD8 Sequence: fasta or formatted (378aa) NCBI GI: 224465242
Description:

BTB (POZ) domain containing 8

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         23           2
 C cysteine            3.4         13           2
 D aspartate           5.6         21           3
 E glutamate           7.4         28           3
 F phenylalanine       5.0         19           2
 G glycine             5.0         19           2
 H histidine           2.4          9           1
 I isoleucine          7.9         30           2
 K lysine              5.6         21           2
 L leucine            10.3         39           2
 M methionine          2.6         10           2
 N asparagine          4.0         15           1
 P proline             3.7         14           2
 Q glutamine           4.0         15           1
 R arginine            5.3         20           3
 S serine              8.7         33           2
 T threonine           3.7         14           1
 V valine              5.6         21           1
 W tryptophan          0.8          3           1
 Y tyrosine            2.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 8 
ABTB1                 0.054   ankyrin repeat and BTB (POZ) domain containing 1 iso...
ABTB1                 0.054   ankyrin repeat and BTB (POZ) domain containing 1 iso...
RCBTB1                0.053   regulator of chromosome condensation (RCC1) and BTB ...
IBTK                  0.052   inhibitor of Bruton's tyrosine kinase 
SPOPL                 0.050   speckle-type POZ protein-like 
KBTBD4                0.046   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD4                0.046   kelch repeat and BTB (POZ) domain containing 4 isof...
IPP                   0.045   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.045   intracisternal A particle-promoted polypeptide isof...
KLHL12                0.045   kelch-like 12 
KLHL24                0.043   DRE1 protein 
KLHL18                0.043   kelch-like 18 
KLHL22                0.041   kelch-like 
KLHL10                0.041   kelch-like 10 
SPOP                  0.041   speckle-type POZ protein 
SPOP                  0.041   speckle-type POZ protein 
SPOP                  0.041   speckle-type POZ protein 
SPOP                  0.041   speckle-type POZ protein 
SPOP                  0.041   speckle-type POZ protein 
SPOP                  0.041   speckle-type POZ protein 
KLHL21                0.039   kelch-like 21 
KBTBD2                0.039   kelch repeat and BTB (POZ) domain containing 2 [Hom...
KLHL20                0.038   kelch-like 20 
KLHL1                 0.037   kelch-like 1 protein 
KLHL32                0.037   kelch-like 32 
ABTB1                 0.037   ankyrin repeat and BTB (POZ) domain containing 1 iso...
BTBD9                 0.035   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.035   BTB (POZ) domain containing 9 isoform a 
KLHL28                0.035   BTB (POZ) domain containing 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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