Guide to the Human Genome
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Name: IMPAD1 Sequence: fasta or formatted (359aa) NCBI GI: 157388900
Description:

inositol monophosphatase domain containing 1

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         32           4
 C cysteine            0.8          3           1
 D aspartate           5.3         19           1
 E glutamate           6.4         23           2
 F phenylalanine       2.2          8           1
 G glycine            10.6         38           3
 H histidine           2.8         10           1
 I isoleucine          4.7         17           2
 K lysine              6.7         24           2
 L leucine             9.7         35           2
 M methionine          3.1         11           1
 N asparagine          2.5          9           1
 P proline             4.2         15           1
 Q glutamine           2.2          8           1
 R arginine            4.2         15           2
 S serine              6.1         22           2
 T threonine           6.1         22           2
 V valine              9.2         33           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol monophosphatase domain containing 1 
BPNT1                 0.114   3'(2'), 5'-bisphosphate nucleotidase 1 
INPP1                 0.054   inositol polyphosphate-1-phosphatase 
INPP1                 0.054   inositol polyphosphate-1-phosphatase 
UTP18                 0.017   UTP18, small subunit processome component 
IMPA2                 0.012   inositol(myo)-1(or 4)-monophosphatase 2 
KRT12                 0.010   keratin 12 
ONECUT3               0.010   one cut homeobox 3 
HSPA8                 0.009   heat shock 70kDa protein 8 isoform 2 
KRT15                 0.009   keratin 15 
KRT9                  0.009   keratin 9 
KRT10                 0.007   keratin 10 
DYM                   0.007   dymeclin 
C20orf24              0.007   RAB5-interacting protein isoform a 
ANKHD1                0.007   ankyrin repeat and KH domain containing 1 isoform 2 ...
VPS13C                0.007   vacuolar protein sorting 13C protein isoform 1A [Hom...
VPS13C                0.007   vacuolar protein sorting 13C protein isoform 2A [Hom...
TUSC1                 0.006   tumor suppressor candidate 1 
PHOX2B                0.006   paired-like homeobox 2b 
ANKHD1                0.006   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.006   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.006   ANKHD1-EIF4EBP3 protein 
FOXD2                 0.004   forkhead box D2 
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 1B [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 2B [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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