Guide to the Human Genome
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Name: DYM Sequence: fasta or formatted (669aa) NCBI GI: 157779137
Description:

dymeclin

Referenced in:

Bone and Related Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         35           3
 C cysteine            1.8         12           2
 D aspartate           3.7         25           2
 E glutamate           6.7         45           3
 F phenylalanine       4.5         30           2
 G glycine             3.4         23           3
 H histidine           2.7         18           2
 I isoleucine          6.7         45           2
 K lysine              4.2         28           2
 L leucine            15.1        101           5
 M methionine          2.2         15           2
 N asparagine          5.4         36           2
 P proline             4.6         31           4
 Q glutamine           5.1         34           2
 R arginine            3.7         25           1
 S serine              9.9         66           3
 T threonine           5.1         34           1
 V valine              5.2         35           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dymeclin 
C17orf28              0.017   hypothetical protein LOC283987 
KLHL34                0.006   kelch-like 34 
C2orf72               0.005   hypothetical protein LOC257407 
C4orf21               0.005   hypothetical protein LOC55345 
PDS5A                 0.005   PDS5, regulator of cohesion maintenance, homolog A ...
PDS5A                 0.005   PDS5, regulator of cohesion maintenance, homolog A ...
PDS5A                 0.005   PDS5, regulator of cohesion maintenance, homolog A ...
LAMC1                 0.005   laminin, gamma 1 precursor 
TP63                  0.005   tumor protein p63 isoform 6 
TP63                  0.005   tumor protein p63 isoform 5 
TP63                  0.005   tumor protein p63 isoform 4 
TP63                  0.005   tumor protein p63 isoform 3 
TP63                  0.005   tumor protein p63 isoform 2 
TP63                  0.005   tumor protein p63 isoform 1 
OVOS                  0.005   PREDICTED: ovostatin 
SFMBT2                0.005   Scm-like with four mbt domains 2 
LOC732434             0.004   PREDICTED: similar to Ovostatin homolog 2 
TANC2                 0.004   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD26               0.004   ankyrin repeat domain 26 
KCNT1                 0.004   potassium channel, subfamily T, member 1 
IMPAD1                0.004   inositol monophosphatase domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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