Guide to the Human Genome
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Name: NEK3 Sequence: fasta or formatted (506aa) NCBI GI: 23510393
Description:

NIMA-related kinase 3 isoform a

Referenced in:

Dual-Specificity Protein Kinases

Other entries for this name:
alt prot [489aa] NIMA-related kinase 3 isoform b
alt mRNA [506aa] NIMA-related kinase 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         24           1
 C cysteine            1.8          9           1
 D aspartate           4.9         25           2
 E glutamate           8.7         44           3
 F phenylalanine       3.2         16           1
 G glycine             5.7         29           2
 H histidine           2.8         14           1
 I isoleucine          5.1         26           2
 K lysine              7.9         40           2
 L leucine            10.7         54           2
 M methionine          2.6         13           1
 N asparagine          6.1         31           2
 P proline             4.9         25           2
 Q glutamine           3.8         19           2
 R arginine            5.3         27           2
 S serine              7.9         40           2
 T threonine           4.7         24           2
 V valine              4.7         24           1
 W tryptophan          1.6          8           1
 Y tyrosine            2.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 3 isoform a 
NEK3                  1.000   NIMA-related kinase 3 isoform a 
NEK3                  0.958   NIMA-related kinase 3 isoform b 
NEK1                  0.304   NIMA-related kinase 1 
NEK5                  0.285   NIMA-related kinase 5 
NEK4                  0.231   NIMA-related kinase 4 
NEK11                 0.194   NIMA-related kinase 11 isoform 2 
NEK11                 0.194   NIMA-related kinase 11 isoform 3 
NEK11                 0.194   NIMA-related kinase 11 isoform 1 
NEK2                  0.177   NIMA-related kinase 2 
NEK9                  0.175   NIMA-related kinase 9 
NEK8                  0.162   NIMA-related kinase 8 
NEK6                  0.149   NIMA-related kinase 6 isoform 1 
NEK6                  0.149   NIMA-related kinase 6 isoform 2 
NEK7                  0.145   NIMA-related kinase 7 
STK36                 0.134   serine/threonine kinase 36 
RPS6KB2               0.118   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
RPS6KA1               0.116   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.116   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
STK10                 0.116   serine/threonine kinase 10 
RPS6KA6               0.115   ribosomal protein S6 kinase polypeptide 6 
RPS6KB1               0.114   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
PLK4                  0.114   polo-like kinase 4 
SLK                   0.114   serine/threonine kinase 2 
RPS6KA3               0.113   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.113   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.113   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
STK3                  0.113   serine/threonine kinase 3 
STK4                  0.109   serine/threonine kinase 4 
PLK1                  0.107   polo-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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