Guide to the Human Genome
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Name: NEK3 Sequence: fasta or formatted (489aa) NCBI GI: 225735561
Description:

NIMA-related kinase 3 isoform b

Referenced in:

Dual-Specificity Protein Kinases

Other entries for this name:
alt prot [506aa] NIMA-related kinase 3 isoform a
alt prot [506aa] NIMA-related kinase 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         22           1
 C cysteine            1.8          9           1
 D aspartate           5.1         25           2
 E glutamate           8.8         43           3
 F phenylalanine       3.3         16           1
 G glycine             5.7         28           2
 H histidine           2.9         14           1
 I isoleucine          4.9         24           2
 K lysine              8.2         40           2
 L leucine            10.8         53           2
 M methionine          2.7         13           1
 N asparagine          5.9         29           2
 P proline             4.9         24           2
 Q glutamine           3.9         19           2
 R arginine            5.1         25           2
 S serine              7.8         38           2
 T threonine           4.5         22           2
 V valine              4.7         23           1
 W tryptophan          1.6          8           1
 Y tyrosine            2.9         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 3 isoform b 
NEK3                  0.989   NIMA-related kinase 3 isoform a 
NEK3                  0.989   NIMA-related kinase 3 isoform a 
NEK1                  0.314   NIMA-related kinase 1 
NEK5                  0.294   NIMA-related kinase 5 
NEK4                  0.236   NIMA-related kinase 4 
NEK11                 0.198   NIMA-related kinase 11 isoform 2 
NEK11                 0.198   NIMA-related kinase 11 isoform 3 
NEK11                 0.198   NIMA-related kinase 11 isoform 1 
NEK2                  0.181   NIMA-related kinase 2 
NEK9                  0.181   NIMA-related kinase 9 
NEK8                  0.167   NIMA-related kinase 8 
NEK6                  0.154   NIMA-related kinase 6 isoform 1 
NEK6                  0.154   NIMA-related kinase 6 isoform 2 
NEK7                  0.150   NIMA-related kinase 7 
STK36                 0.135   serine/threonine kinase 36 
STK10                 0.125   serine/threonine kinase 10 
RPS6KB2               0.122   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
RPS6KA1               0.120   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.120   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA6               0.119   ribosomal protein S6 kinase polypeptide 6 
STK3                  0.119   serine/threonine kinase 3 
RPS6KB1               0.118   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
PLK4                  0.118   polo-like kinase 4 
RPS6KA3               0.117   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.117   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.117   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
STK4                  0.115   serine/threonine kinase 4 
SLK                   0.113   serine/threonine kinase 2 
PLK1                  0.111   polo-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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