OTUD6B 6136

Name: OTUD6B	Sequence: fasta or formatted (323aa)		NCBI GI: 157364937
Description: OTU domain containing 6B		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 24 2 C cysteine 1.5 5 1 D aspartate 3.4 11 1 E glutamate 13.3 43 3 F phenylalanine 1.2 4 1 G glycine 3.4 11 2 H histidine 2.5 8 1 I isoleucine 5.9 19 2 K lysine 9.0 29 2 L leucine 10.5 34 2 M methionine 2.8 9 1 N asparagine 4.0 13 1 P proline 4.0 13 2 Q glutamine 5.6 18 1 R arginine 6.8 22 2 S serine 4.0 13 1 T threonine 4.6 15 2 V valine 6.5 21 2 W tryptophan 0.6 2 1 Y tyrosine 2.8 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 OTU domain containing 6B OTUD6A 0.482 OTU domain containing 6A OTUD3 0.062 OTU domain containing 3 MYH15 0.047 myosin, heavy polypeptide 15 OTUD5 0.044 OTU domain containing 5 isoform b OTUD5 0.044 OTU domain containing 5 isoform b CENPE 0.042 centromere protein E SFRS17A 0.041 DNA segment on chromosome X and Y (unique) 155 expre... INCENP 0.039 inner centromere protein antigens 135/155kDa isofor... INCENP 0.039 inner centromere protein antigens 135/155kDa isofor... SMC2 0.039 structural maintenance of chromosomes 2 SMC2 0.039 structural maintenance of chromosomes 2 SMC2 0.039 structural maintenance of chromosomes 2 MYH9 0.038 myosin, heavy polypeptide 9, non-muscle CEP290 0.038 centrosomal protein 290kDa OTUD5 0.036 OTU domain containing 5 isoform a CROCC 0.036 ciliary rootlet coiled-coil TPM2 0.034 tropomyosin 2 (beta) isoform 1 CGNL1 0.034 cingulin-like 1 MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... GOLGA4 0.033 golgi autoantigen, golgin subfamily a, 4 CDC2L1 0.033 cell division cycle 2-like 1 (PITSLRE proteins) isof... LRRCC1 0.033 sodium channel associated protein 2 isoform b [Homo... LRRCC1 0.033 sodium channel associated protein 2 isoform a [Homo... MYH10 0.033 myosin, heavy polypeptide 10, non-muscle TCHH 0.033 trichohyalin CENPF 0.033 centromere protein F Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.