Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 157151759
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157151759 hypothetical protein LOC642587 [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157151759 hypothetical protein LOC642587 [Homo sapiens] 202 5e-53
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 40 4e-04
gi|116805334 Ras-induced senescence 1 [Homo sapiens] 36 0.007
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 35 0.013
gi|148539642 alkB, alkylation repair homolog 5 [Homo sapiens] 35 0.017
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 33 0.048
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 33 0.048
gi|151301228 formin binding protein 3 [Homo sapiens] 33 0.048
gi|7661892 REST corepressor 1 [Homo sapiens] 33 0.063
gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens] 32 0.11
gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens] 32 0.11
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 32 0.11
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 32 0.11
gi|223646113 Sp9 transcription factor homolog [Homo sapiens] 32 0.14
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 32 0.14
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 32 0.14
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 32 0.14
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 31 0.18
gi|154146231 DMRT-like family A2 [Homo sapiens] 31 0.18
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 31 0.18
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 31 0.18
gi|224591419 zinc finger and BTB domain containing 8B [Homo sapi... 31 0.24
gi|126090909 engrailed homeobox 1 [Homo sapiens] 31 0.24
gi|12707580 paired-like homeobox 2b [Homo sapiens] 31 0.24
gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens] 31 0.24
gi|19111150 angiomotin isoform 2 [Homo sapiens] 31 0.24
gi|166064029 angiomotin isoform 1 [Homo sapiens] 31 0.24
gi|5902108 SRY-box 21 [Homo sapiens] 31 0.24
gi|24497554 homeobox A13 [Homo sapiens] 30 0.31
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 30 0.31
>gi|157151759 hypothetical protein LOC642587 [Homo sapiens]
Length = 102
Score = 202 bits (514), Expect = 5e-53
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MFFFIKERNQLFRTGPHLSSGVISVPHRPAELGALYRTLSSLKYPSWRVRTPHEDFSGVK 60
MFFFIKERNQLFRTGPHLSSGVISVPHRPAELGALYRTLSSLKYPSWRVRTPHEDFSGVK
Sbjct: 1 MFFFIKERNQLFRTGPHLSSGVISVPHRPAELGALYRTLSSLKYPSWRVRTPHEDFSGVK 60
Query: 61 FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT
Sbjct: 61 FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 52 PHEDFSGVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
P +D G G +S+ AT+AAAT+ AAAAAAAAAAAAA
Sbjct: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAA 182
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
G+ + A+ + A T+AA AAAAAAAAAAA A
Sbjct: 154 GSSSSPAATSAAATSAAAAAAAAAAAAAAAAGA 186
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARV 99
++AAT+ AAA AAAAAAAA A A V
Sbjct: 163 SAAATSAAAAAAAAAAAAAAAAGAGAPSV 191
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAA 97
SAA A AAA AAAA A A + A
Sbjct: 168 SAAAAAAAAAAAAAAAAGAGAPSVGA 193
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 66 ADNHEASAATATTAAATTVAAAAAAAAA 93
A + A++A A AAA AAAAA A A
Sbjct: 161 ATSAAATSAAAAAAAAAAAAAAAAGAGA 188
>gi|116805334 Ras-induced senescence 1 [Homo sapiens]
Length = 300
Score = 35.8 bits (81), Expect = 0.007
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 57 SGVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVT 100
+G++ RR A +AAT A T AAAAAAAAAAAAA VT
Sbjct: 254 NGMEQRRTTAST---TAATPAAVPAGTTAAAAAAAAAAAAAAVT 294
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/32 (56%), Positives = 19/32 (59%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
AS AT AA AAAAAAAAAAA +T
Sbjct: 263 ASTTAATPAAVPAGTTAAAAAAAAAAAAAAVT 294
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 61 FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
F +G + +A+T A A AAAAAAAAA
Sbjct: 251 FLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAA 287
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 22/88 (25%)
Query: 10 QLFRTGPHLSSGVISVPHRPAELGALYRTLSSLKYPSWRVRTPHEDFSGVKFRRHGADNH 69
QL PH + ++S P P GA + S PS G+ +
Sbjct: 89 QLSAATPHGINDILSRPSMPVASGAALPSAS----PS------------------GSSSS 126
Query: 70 EASAATATTAAATTVAAAAAAAAAAAAA 97
+S+A+A++A+A AAAAAAAAA++ A
Sbjct: 127 SSSSASASSASAAAAAAAAAAAAASSPA 154
>gi|148539642 alkB, alkylation repair homolog 5 [Homo sapiens]
Length = 394
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 67 DNHEASAATATTAAATTVAAAAAAAAAA 94
DN++A + A AAA VAAAAAAAAAA
Sbjct: 21 DNYKAGSREAAAAAAAAVAAAAAAAAAA 48
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 61 FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
FR G A+AA +AA+ AAAAAAAAA++AA
Sbjct: 338 FRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAASSAA 374
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 72 SAATATTAAATTVAAAAAAAAAAA 95
SAA+A AAA AAA++AAAA A
Sbjct: 355 SAASAAAAAAAAAAAASSAAAAGA 378
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/26 (73%), Positives = 19/26 (73%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAA 97
SAA A AAA AAAAAAAAAAA A
Sbjct: 494 SAAAAIAAAAAAAAAAAAAAAAAAPA 519
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/27 (66%), Positives = 19/27 (70%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AAA AAAAAAAAA A A
Sbjct: 495 AAAAIAAAAAAAAAAAAAAAAAAPAPA 521
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/58 (43%), Positives = 28/58 (48%)
Query: 40 SSLKYPSWRVRTPHEDFSGVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
SS K S P + S +K A A+AA A AAA AAA A A AAAAA
Sbjct: 470 SSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAA 527
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/31 (58%), Positives = 19/31 (61%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTL 101
A+AA A AAA AAAA A A AAAA L
Sbjct: 500 AAAAAAAAAAAAAAAAAAPAPALAAAAAPAL 530
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A A A +AAAAA A AAAAA
Sbjct: 509 AAAAAAAAAPAPALAAAAAPALAAAAA 535
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AAA A AAAAA A AAA
Sbjct: 507 AAAAAAAAAAAPAPALAAAAAPALAAA 533
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTL 101
A+AA A AA AAAAA A AAAA L
Sbjct: 508 AAAAAAAAAAPAPALAAAAAPALAAAAAPAL 538
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AAA A AAAAA A AA
Sbjct: 506 AAAAAAAAAAAAPAPALAAAAAPALAA 532
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AAA A A AAAAA A A
Sbjct: 505 AAAAAAAAAAAAAPAPALAAAAAPALA 531
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A A AAA +AAAAA A AAAAA
Sbjct: 517 APAPALAAAAAPALAAAAAPALAAAAA 543
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+ A A AAA AAAAA A AAAA
Sbjct: 516 AAPAPALAAAAAPALAAAAAPALAAAA 542
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AAA AAAAA A A AA
Sbjct: 524 AAAAPALAAAAAPALAAAAAPAPAPAA 550
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAA 96
A+AA A AA AAA AAAA+AA
Sbjct: 540 AAAAPAPAPAAAPAVAAAPAAAASAA 565
Score = 26.2 bits (56), Expect = 5.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+A AAA +AAAAA A A AAA
Sbjct: 525 AAAPALAAAAAPALAAAAAPAPAPAAA 551
Score = 26.2 bits (56), Expect = 5.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A A A AAA AAAA+AA
Sbjct: 539 AAAAAPAPAPAAAPAVAAAPAAAASAA 565
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAA 96
A+AA A AAA A AAA A AAA
Sbjct: 532 AAAAPALAAAAAPAPAPAAAPAVAAA 557
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/26 (73%), Positives = 19/26 (73%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAA 97
S A AAA VAAAAAAAAAAAAA
Sbjct: 242 STMAAAEAAAAVVAAAAAAAAAAAAA 267
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAA 96
++ A A AAA AAAAAAAAAAAA
Sbjct: 242 STMAAAEAAAAVVAAAAAAAAAAAAA 267
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
A AA A AAA AAAAAAA A A+ + T
Sbjct: 247 AEAAAAVVAAAAAAAAAAAAANANASTSASNT 278
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
EA+AA AAA AAAAA A A+ +A T++
Sbjct: 248 EAAAAVVAAAAAAAAAAAAANANASTSASNTVS 280
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAAAA 97
E +T AAA AA AAAAAAAAA
Sbjct: 236 EIPTTMSTMAAAEAAAAVVAAAAAAAAA 263
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 73 AATATTAAATTVAAAAAAAAAAAAARVT 100
AA AA AAAAAAAAAAA A +
Sbjct: 245 AAAEAAAAVVAAAAAAAAAAAAANANAS 272
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAA 96
+AA A A AAAAAAAAAA A
Sbjct: 245 AAAEAAAAVVAAAAAAAAAAAAANA 269
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+ A A AA AAAAAAAA A A+
Sbjct: 246 AAEAAAAVVAAAAAAAAAAAAANANAS 272
Score = 26.2 bits (56), Expect = 5.9
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+A A A AAAAAAAAA A A
Sbjct: 245 AAAEAAAAVVAAAAAAAAAAAAANANA 271
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 59 VKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
V +R G +N ASA+ A +AA + A A+ AA AA+ A
Sbjct: 8 VSGKRRGRNNAAASASAAAASAAASAACASPAATAASGA 46
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A A+ A TAA+ A++A+AAAA+AAA
Sbjct: 34 ACASPAATAASGAAASSASAAAASAAA 60
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 73 AATATTAAATTVAAAAAAAAAAA 95
AATA + AA + A+AAAA+AAAA
Sbjct: 39 AATAASGAAASSASAAAASAAAA 61
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 72 SAATATTAAATTVAAAAAAAAAA 94
+A A+ AAA++ +AAAA+AAAA
Sbjct: 39 AATAASGAAASSASAAAASAAAA 61
>gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens]
Length = 178
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 28/75 (37%)
Query: 51 TPHEDFSGVKFRRHGADNHEASAATA----------------------------TTAAAT 82
TP+ D++G + ++ A A+AA A TAAA
Sbjct: 89 TPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAP 148
Query: 83 TVAAAAAAAAAAAAA 97
AAAAAAAAAAAAA
Sbjct: 149 GTAAAAAAAAAAAAA 163
Score = 25.8 bits (55), Expect = 7.7
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Query: 71 ASAATAT-----TAAATTVAAAAAAAAAAAAA 97
A+AA+ T T AA +AAAAAAAAAAA
Sbjct: 83 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAA 114
>gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens]
Length = 191
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 28/75 (37%)
Query: 51 TPHEDFSGVKFRRHGADNHEASAATA----------------------------TTAAAT 82
TP+ D++G + ++ A A+AA A TAAA
Sbjct: 102 TPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAP 161
Query: 83 TVAAAAAAAAAAAAA 97
AAAAAAAAAAAAA
Sbjct: 162 GTAAAAAAAAAAAAA 176
Score = 25.8 bits (55), Expect = 7.7
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Query: 71 ASAATAT-----TAAATTVAAAAAAAAAAAAA 97
A+AA+ T T AA +AAAAAAAAAAA
Sbjct: 96 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAA 127
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 28/75 (37%)
Query: 51 TPHEDFSGVKFRRHGADNHEASAATA----------------------------TTAAAT 82
TP+ D++G + ++ A A+AA A TAAA
Sbjct: 147 TPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAP 206
Query: 83 TVAAAAAAAAAAAAA 97
AAAAAAAAAAAAA
Sbjct: 207 GTAAAAAAAAAAAAA 221
Score = 25.8 bits (55), Expect = 7.7
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Query: 71 ASAATAT-----TAAATTVAAAAAAAAAAAAA 97
A+AA+ T T AA +AAAAAAAAAAA
Sbjct: 141 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAA 172
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 69 HEASAATATTAAATTVAAAAAAAAAAAAA 97
H +AA A AAA VAAA+AAAA AA
Sbjct: 225 HHGAAAAAAAAAAGQVAAASAAAAVVGAA 253
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARV 99
A+AA AAA AAA AAA+AAA V
Sbjct: 221 AAAAHHGAAAAAAAAAAGQVAAASAAAAV 249
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 64 HGADNHEASAATATTAAATTVAAAAAAAAAAA 95
HGA A+AA AAA+ AA AA A+
Sbjct: 226 HGAAAAAAAAAAGQVAAASAAAAVVGAAGLAS 257
>gi|223646113 Sp9 transcription factor homolog [Homo sapiens]
Length = 484
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 69 HEASAATATTAAATTVAAAAAAAAAAAAAR 98
H++ + A AAA AAAAAAAAA+A +
Sbjct: 446 HDSGVSAARAAAAAAAAAAAAAAAASAGGK 475
Score = 30.0 bits (66), Expect = 0.41
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAAAAR 98
++SAA A AA+ ++ AAAAAA ++AR
Sbjct: 269 DSSAAVAAAAASAMISGAAAAAAGGSSAR 297
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 49 VRTPHEDFSGVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAA 95
+ TP + + G A+AA A AAA AA+A AA+
Sbjct: 433 LETPRSESPDLILHDSGVSAARAAAAAAAAAAAAAAAASAGGKEAAS 479
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 64 HGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
H + A AA A AAA AAAA+A AA+
Sbjct: 446 HDSGVSAARAAAAAAAAAAAAAAAASAGGKEAAS 479
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 58 GVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVT 100
G K+R A+N +A A AAA AAA A +AA + T
Sbjct: 190 GAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSAT 232
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 58 GVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVT 100
G K+R A+N +A A AAA AAA A +AA + T
Sbjct: 190 GAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSAT 232
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 58 GVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVT 100
G K+R A+N +A A AAA AAA A +AA + T
Sbjct: 249 GAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSAT 291
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 31.2 bits (69), Expect = 0.18
Identities = 22/41 (53%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 62 RRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
RR G H AAA AAAAAAAAAAAAA LT
Sbjct: 316 RRRGVLAHRRRGVLLPAAAA---AAAAAAAAAAAAAAFCLT 353
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTL 101
A+AATAT +VA+ AAAAAAAA+ V++
Sbjct: 16 AAAATATGPPVASVASVAAAAAAAASLPVSV 46
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+ A A TA VA+ A+ AAAAAAA
Sbjct: 13 AATAAAATATGPPVASVASVAAAAAAA 39
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
A+AA AT + A+ AAAAAAAA + ++
Sbjct: 14 ATAAAATATGPPVASVASVAAAAAAAASLPVS 45
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAARVTL 101
G +H A +T T AA A AAAAA A A A T+
Sbjct: 132 GLPSHAARPSTDFTQAAAAAAVAAAAATATATATATV 168
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAARVTL 101
G +H A +T T AA A AAAAA A A A T+
Sbjct: 132 GLPSHAARPSTDFTQAAAAAAVAAAAATATATATATV 168
>gi|224591419 zinc finger and BTB domain containing 8B [Homo
sapiens]
Length = 495
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/22 (77%), Positives = 17/22 (77%)
Query: 76 ATTAAATTVAAAAAAAAAAAAA 97
A AAA AAAAAAAAAAAAA
Sbjct: 132 AAVAAAVAAAAAAAAAAAAAAA 153
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 70 EASAATATTAAATTVAAAAAAAAAA 94
E AA A AA AAAAAAAAAA
Sbjct: 129 EKEAAVAAAVAAAAAAAAAAAAAAA 153
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/24 (66%), Positives = 17/24 (70%)
Query: 76 ATTAAATTVAAAAAAAAAAAAARV 99
A AA AAAAAAAAAAAA +V
Sbjct: 133 AVAAAVAAAAAAAAAAAAAAAHQV 156
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAA 95
EA+ A A AAA AAAAAAAAAAA
Sbjct: 131 EAAVAAAVAAAA---AAAAAAAAAAA 153
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/28 (64%), Positives = 19/28 (67%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAAR 98
AS A AAA AAA AAAAAAAAA+
Sbjct: 192 ASKAGNPAAAAAAAAAAVAAAAAAAAAK 219
Score = 29.6 bits (65), Expect = 0.53
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A A+ A AA AAAAA AAAAAAA
Sbjct: 190 AGASKAGNPAAAAAAAAAAVAAAAAAA 216
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 67 DNHEASAATATTAAATTVAAAAAAAAAAAAA 97
D + +AA A + A AAAAAAAAAA AA
Sbjct: 181 DGSQPAAAGAGASKAGNPAAAAAAAAAAVAA 211
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+A + A AAAAAAAAA AAA
Sbjct: 186 AAAGAGASKAGNPAAAAAAAAAAVAAA 212
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+ A A+ A AAAAAAAA AAAA
Sbjct: 187 AAGAGASKAGNPAAAAAAAAAAVAAAA 213
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAA 94
GA +A A AAA AAAAAAAAA
Sbjct: 189 GAGASKAGNPAAAAAAAAAAVAAAAAAAAA 218
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
G+ A A + AAAAAAA AAAAA
Sbjct: 182 GSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAA 214
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
G + + AA A AAA AAAAAAAA AA
Sbjct: 233 GGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAA 265
Score = 29.6 bits (65), Expect = 0.53
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
G +AA A AAA AAAAAAA AAA
Sbjct: 234 GEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAA 266
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/31 (54%), Positives = 17/31 (54%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAA 95
G E A AAA AAAAAAAAAAA
Sbjct: 230 GGPGGEPGKGGAAAAAAAAAAAAAAAAAAAA 260
>gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]
Length = 732
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARV 99
A+AA A A T A+AAAAAA A A RV
Sbjct: 51 AAAAAAAAPAPTPAASAAAAAATAGARRV 79
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAAAA 97
E S A A AAA AA+AAAAAA A
Sbjct: 47 EPSPAAAAAAAAPAPTPAASAAAAAATA 74
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 71 ASAATATTA--AATTVAAAAAAAAAAAAA 97
A+AAT TT AA VA AAAAA AAAAA
Sbjct: 489 ATAATITTTMVAAAPVAVAAAAAPAAAAA 517
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+A TAT A TT AAA A AAAA
Sbjct: 484 AAAITATAATITTTMVAAAPVAVAAAA 510
Score = 28.9 bits (63), Expect = 0.91
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
G ++++ +A + A AAA AAA A AA +T T
Sbjct: 460 GTESNKTAAVAPISVPAPVAAAATAAAITATAATITTT 497
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAA 96
A ATA T T VAAA A AAAAA
Sbjct: 486 AITATAATITTTMVAAAPVAVAAAAA 511
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA + AAA + AAA+ A+AAA A
Sbjct: 525 ATAAAVSPAAAGQIPAAASVASAAAVA 551
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 71 ASAATATTAAA---TTVAAAAAAAAAAAAA 97
A+AA T AA TT+ AAA A AAAAA
Sbjct: 482 ATAAAITATAATITTTMVAAAPVAVAAAAA 511
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAARV 99
+AA AAA+ +AAA A +AAAAA V
Sbjct: 533 AAAGQIPAAASVASAAAVAPSAAAAAAV 560
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
A+A A AAA AAAA + A AAA ++
Sbjct: 500 AAAPVAVAAAAAPAAAAAPSPATAAATAAAVS 531
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AA + AAA AAA + AA
Sbjct: 508 AAAAPAAAAAPSPATAAATAAAVSPAA 534
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 71 ASAATATTA--AATTVAAAAAAAAAAAAA 97
A+AAT TT AA VA AAAAA AAAAA
Sbjct: 898 ATAATITTTMVAAAPVAVAAAAAPAAAAA 926
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+A TAT A TT AAA A AAAA
Sbjct: 893 AAAITATAATITTTMVAAAPVAVAAAA 919
Score = 28.9 bits (63), Expect = 0.91
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
G ++++ +A + A AAA AAA A AA +T T
Sbjct: 869 GTESNKTAAVAPISVPAPVAAAATAAAITATAATITTT 906
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAA 96
A ATA T T VAAA A AAAAA
Sbjct: 895 AITATAATITTTMVAAAPVAVAAAAA 920
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA + AAA + AAA+ A+AAA A
Sbjct: 934 ATAAAVSPAAAGQIPAAASVASAAAVA 960
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 71 ASAATATTAAA---TTVAAAAAAAAAAAAA 97
A+AA T AA TT+ AAA A AAAAA
Sbjct: 891 ATAAAITATAATITTTMVAAAPVAVAAAAA 920
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAARV 99
+AA AAA+ +AAA A +AAAAA V
Sbjct: 942 AAAGQIPAAASVASAAAVAPSAAAAAAV 969
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
A+A A AAA AAAA + A AAA ++
Sbjct: 909 AAAPVAVAAAAAPAAAAAPSPATAAATAAAVS 940
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
A+AA A AA + AAA AAA + AA
Sbjct: 917 AAAAPAAAAAPSPATAAATAAAVSPAA 943
>gi|5902108 SRY-box 21 [Homo sapiens]
Length = 276
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 68 NHEASAATATTAAATTV----AAAAAAAAAAAAA 97
N E +AA A AAA AAAAAAAAAAAAA
Sbjct: 133 NPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAA 166
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 66 ADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
A+ +A+AA A AA +AAAAAAAAAA
Sbjct: 132 ANPEKAAAAAAAAAARVFFPQSAAAAAAAAAA 163
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 71 ASAATATTAAATTVAAAAAAAAAAAAA 97
AS+ TA A AAAAAAAAAAA
Sbjct: 192 ASSLGYPTAGAGAFHGAAAAAAAAAAA 218
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 66 ADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
A + ++ A +AA AAAAAAAAAAAAA
Sbjct: 102 ASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAA 133
Score = 29.6 bits (65), Expect = 0.53
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
GA + +SA +A AAAAAAAAAAAAA
Sbjct: 100 GAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAA 132
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 78 TAAATTVAAAAAAAAAAAAA 97
+AAA AAAAAAAAAAAA+
Sbjct: 115 SAAAAAAAAAAAAAAAAAAS 134
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 74 ATATTAAATTVAAAAAAAAAAAAA 97
A + AAA AAAAAAAAAAA++
Sbjct: 112 APPSAAAAAAAAAAAAAAAAAASS 135
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 70 EASAATATTAAATTVAAAAAAAAAAA 95
EA + A AAA AAAAAAAA+++
Sbjct: 111 EAPPSAAAAAAAAAAAAAAAAAASSS 136
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 73 AATATTAAATTVAAAAAAAAAAAAA 97
A + AAA AAAAAAAAAA+++
Sbjct: 112 APPSAAAAAAAAAAAAAAAAAASSS 136
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 74 ATATTAAATTVAAAAAAAAAAAA 96
A A +VAAAAAAAAAAAA
Sbjct: 62 AAAAAGGNFSVAAAAAAAAAAAA 84
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 72 SAATATTAAATTVAAAAAAAAAAAAA 97
SA A T A AAAAAAAAAAAAA
Sbjct: 29 SANAAATPAPGNAAAAAAAAAAAAAA 54
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAA 96
G+ A+AA AT A AAAAAAAAAAAA
Sbjct: 24 GSPGPSANAA-ATPAPGNAAAAAAAAAAAAAA 54
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 65 GADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
G +A A A AAAAAAAAAAAAA
Sbjct: 21 GTGGSPGPSANAAATPAPGNAAAAAAAAAAAAA 53
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.125 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,367,676
Number of Sequences: 37866
Number of extensions: 125582
Number of successful extensions: 3828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1779
Number of HSP's gapped (non-prelim): 1114
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.