Guide to the Human Genome
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Name: NNT Sequence: fasta or formatted (1086aa) NCBI GI: 122939155
Description:

nicotinamide nucleotide transhydrogenase

Referenced in:

Mitochondria

Other entries for this name:
alt mRNA [1086aa] nicotinamide nucleotide transhydrogenase
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7        127           3
 C cysteine            1.2         13           2
 D aspartate           3.5         38           2
 E glutamate           4.0         43           1
 F phenylalanine       3.3         36           2
 G glycine            10.8        117           3
 H histidine           1.5         16           1
 I isoleucine          6.4         70           3
 K lysine              5.7         62           2
 L leucine            11.0        119           3
 M methionine          3.2         35           1
 N asparagine          3.7         40           3
 P proline             4.9         53           2
 Q glutamine           3.2         35           2
 R arginine            2.2         24           1
 S serine              5.8         63           2
 T threonine           6.5         71           2
 V valine              7.8         85           3
 W tryptophan          0.4          4           1
 Y tyrosine            3.2         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nicotinamide nucleotide transhydrogenase 
NNT                   1.000   nicotinamide nucleotide transhydrogenase 
AMAC1L1               0.006   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...
TMEM65                0.006   transmembrane protein 65 
LOC100290146          0.005   PREDICTED: hypothetical protein XP_002347524 
AMAC1                 0.005   acyl-malonyl condensing enzyme 1 
AMAC1L3               0.005   acyl-malonyl condensing enzyme 1-like 3 
AMAC1L1               0.005   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
GSR                   0.004   glutathione reductase 
SORD                  0.004   sorbitol dehydrogenase 
SLC2A4                0.003   glucose transporter 4 
SLC23A2               0.003   solute carrier family 23 (nucleobase transporters), ...
SLC23A2               0.003   solute carrier family 23 (nucleobase transporters), ...
CUGBP1                0.003   CUG triplet repeat, RNA-binding protein 1 isoform 2 ...
CUGBP2                0.003   CUG triplet repeat, RNA binding protein 2 isoform 1 ...
CUGBP2                0.003   CUG triplet repeat, RNA binding protein 2 isoform 2...
APC2                  0.003   adenomatosis polyposis coli 2 
PTGES2                0.002   prostaglandin E synthase 2 
CUGBP2                0.002   CUG triplet repeat, RNA binding protein 2 isoform 4...
BRDT                  0.002   testis-specific bromodomain protein 
BRDT                  0.002   testis-specific bromodomain protein 
SIRT5                 0.002   sirtuin 5 isoform 2 
SIRT5                 0.002   sirtuin 5 isoform 1 
C10orf12              0.002   hypothetical protein LOC26148 
TMCO4                 0.002   transmembrane and coiled-coil domains 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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