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Search of human proteins with 110349750
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens]
(493 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens] 990 0.0
gi|29029632 anaplastic lymphoma kinase [Homo sapiens] 34 0.35
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 34 0.35
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 33 0.77
gi|18426913 drebrin 1 isoform b [Homo sapiens] 33 0.77
gi|18426915 drebrin 1 isoform a [Homo sapiens] 33 0.77
gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo ... 32 1.0
gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo ... 32 1.0
gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo ... 32 1.0
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 1.7
gi|7705881 zinc finger protein 580 [Homo sapiens] 32 1.7
gi|46361970 zinc finger protein 580 [Homo sapiens] 32 1.7
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 2.3
gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 2.3
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 31 2.3
gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens] 31 2.3
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 31 2.3
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 31 2.9
gi|57242766 hypothetical protein LOC168455 [Homo sapiens] 31 2.9
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 3.8
gi|169162399 PREDICTED: hypothetical protein [Homo sapiens] 30 5.0
gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo ... 30 5.0
gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo ... 30 5.0
gi|110349792 growth differentiation factor 1 [Homo sapiens] 30 5.0
gi|32880229 selenoprotein O [Homo sapiens] 30 5.0
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 30 5.0
gi|169165478 PREDICTED: hypothetical protein [Homo sapiens] 30 6.6
gi|239752721 PREDICTED: beta-lactamase-like protein ENSP00000383... 30 6.6
gi|169165887 PREDICTED: hypothetical protein [Homo sapiens] 30 6.6
gi|239747261 PREDICTED: beta-lactamase-like protein ENSP00000383... 30 6.6
>gi|110349750 malonyl-CoA decarboxylase precursor [Homo sapiens]
Length = 493
Score = 990 bits (2559), Expect = 0.0
Identities = 493/493 (100%), Positives = 493/493 (100%)
Query: 1 MRGFGPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKT 60
MRGFGPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKT
Sbjct: 1 MRGFGPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKT 60
Query: 61 PAPAEGQCADFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAA 120
PAPAEGQCADFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAA
Sbjct: 61 PAPAEGQCADFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAA 120
Query: 121 VLLQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPDVREMNG 180
VLLQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPDVREMNG
Sbjct: 121 VLLQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPDVREMNG 180
Query: 181 VLKGMLSEWFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFF 240
VLKGMLSEWFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFF
Sbjct: 181 VLKGMLSEWFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFF 240
Query: 241 SHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQG 300
SHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQG
Sbjct: 241 SHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQG 300
Query: 301 VELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSEC 360
VELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSEC
Sbjct: 301 VELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSEC 360
Query: 361 KEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVA 420
KEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVA
Sbjct: 361 KEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVA 420
Query: 421 NFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYLGSKIIKASEQV 480
NFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYLGSKIIKASEQV
Sbjct: 421 NFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYLGSKIIKASEQV 480
Query: 481 LSLVAQFQKNSKL 493
LSLVAQFQKNSKL
Sbjct: 481 LSLVAQFQKNSKL 493
>gi|29029632 anaplastic lymphoma kinase [Homo sapiens]
Length = 1620
Score = 33.9 bits (76), Expect = 0.35
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 16 LRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEGQCADFVSFY 75
L LPP + +A G+L LLR + P P +PAPAE + V
Sbjct: 71 LLLPPSSSELKAGRPEARGSLALDCAPLLR-LLGPAPGVSWTAGSPAPAEARTLSRVLKG 129
Query: 76 GGLAETAQRAELLGRLARGFGVDH--GQVAEQSAGVLHLRQQQREAAVLLQAEDRLRYAL 133
G + + + +L+ L ++ G E + G+L + + + Q E RLR L
Sbjct: 130 GSVRKLRRAKQLVLELGEEAILEGCVGPPGEAAVGLLQFNLSELFSWWIRQGEGRLRIRL 189
Query: 134 VP 135
+P
Sbjct: 190 MP 191
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 33.9 bits (76), Expect = 0.35
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 17 RLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEGQ 67
R PP PPGP GQ E A + + A PP PA + + + P G+
Sbjct: 1013 RRPPSPPGPEERKGQKRDEEEEATER--KPASPPLPATQQEKPSQTPEAGR 1061
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 32.7 bits (73), Expect = 0.77
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 6 PGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDEL---LRRAVPPTPAYELREKTPA 62
PGL L P R GP S Q +G R++ E R A PPTP ++ + +
Sbjct: 267 PGLLQPPTLAPWQPSRGDGPPAVSSQPSGG--RSLGEEGPPTRGASPPTPPVSIKSERLS 324
Query: 63 PAEGQCADF 71
PA G DF
Sbjct: 325 PAPGGPGDF 333
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 11 RRLLPLRLPPRPPGPR-LASGQAAGALERAMDELLRR-----AVPPTPAYELREKTP 61
RR+ P +P R P AS A +ERA+DE+ PP PA E +E +P
Sbjct: 328 RRMAPTPIPTRSPSDSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEPSP 384
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 11 RRLLPLRLPPRPPGPR-LASGQAAGALERAMDELLRR-----AVPPTPAYELREKTP 61
RR+ P +P R P AS A +ERA+DE+ PP PA E +E +P
Sbjct: 326 RRMAPTPIPTRSPSDSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEPSP 382
>gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo
sapiens]
Length = 209
Score = 32.3 bits (72), Expect = 1.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 12 RLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPA 62
RL P R PPRPPG G AA + + RA PP A LR P+
Sbjct: 161 RLPPRRGPPRPPGLPYPGGLAAP--RASPPQHPNRAAPPASARRLRSPGPS 209
>gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo
sapiens]
Length = 209
Score = 32.3 bits (72), Expect = 1.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 12 RLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPA 62
RL P R PPRPPG G AA + + RA PP A LR P+
Sbjct: 161 RLPPRRGPPRPPGLPYPGGLAAP--RASPPQHPNRAAPPASARRLRSPGPS 209
>gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo
sapiens]
Length = 209
Score = 32.3 bits (72), Expect = 1.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 12 RLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPA 62
RL P R PPRPPG G AA + + RA PP A LR P+
Sbjct: 161 RLPPRRGPPRPPGLPYPGGLAAP--RASPPQHPNRAAPPASARRLRSPGPS 209
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 2 RGFGPGLTARRLLPLRLPPRPPGPRLASGQAAG--ALERAMDELLRRAVPPTPAYELREK 59
RG GPG R PP P PRL + +A A + L R P+P+++ R
Sbjct: 1214 RGLGPG----RAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRESPSPSHQARPG 1269
Query: 60 TPAP 63
P P
Sbjct: 1270 VPPP 1273
>gi|7705881 zinc finger protein 580 [Homo sapiens]
Length = 172
Score = 31.6 bits (70), Expect = 1.7
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 16 LRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEG 66
L LPPRPP PR +S + AMD +A PP P E TP+ A G
Sbjct: 2 LLLPPRPPHPRSSSPE-------AMDPPPPKA-PPFPKAEGPSSTPSSAAG 44
>gi|46361970 zinc finger protein 580 [Homo sapiens]
Length = 172
Score = 31.6 bits (70), Expect = 1.7
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 16 LRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEG 66
L LPPRPP PR +S + AMD +A PP P E TP+ A G
Sbjct: 2 LLLPPRPPHPRSSSPE-------AMDPPPPKA-PPFPKAEGPSSTPSSAAG 44
>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 363
Score = 31.2 bits (69), Expect = 2.3
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 6 PGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
PGL RRL PPRP G L SG+ R + + PP PA ++R + P PA
Sbjct: 102 PGL--RRLQQRERPPRP-GLLLESGR-----RRDSRRHVTSSQPPLPATQIRPRNPCPA 152
>gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 31.2 bits (69), Expect = 2.3
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 6 PGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
PGL RRL PPRP G L SG+ R + + PP PA ++R + P PA
Sbjct: 102 PGL--RRLQQRERPPRP-GLLLESGR-----RRDSRRHVTSSQPPLPATQIRPRNPCPA 152
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 31.2 bits (69), Expect = 2.3
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 18/51 (35%)
Query: 15 PLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAE 65
P RLPP PPGP LLR A PP P Y R +TP E
Sbjct: 180 PARLPPAPPGP-----------------LLRPARPPRP-YFPRPRTPPTCE 212
>gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 31.2 bits (69), Expect = 2.3
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 6 PGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
PGL RRL PPRP G L SG+ R + + PP PA ++R + P PA
Sbjct: 102 PGL--RRLQQRERPPRP-GLLLESGR-----RRDSRRHVTSSQPPLPATQIRPRNPCPA 152
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 217 AVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSE 276
+V PV N +D+K P + + + L ++ S +QAI++ PP +
Sbjct: 188 SVIPVINKIDLKNADPERVENQIEKVFDIPSDECIKISAKLGTNVESVLQAIIERIPPPK 247
Query: 277 TEEKNKITAAIFYS 290
KN + A +F S
Sbjct: 248 VHRKNPLRALVFDS 261
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 30.8 bits (68), Expect = 2.9
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 15 PLRLPPRPPGPRLASGQAAGALERAMDELL------RRAVPPTP 52
P RLPP PPGP L + R LL R+ PP P
Sbjct: 227 PARLPPAPPGPPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLP 270
>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
Length = 235
Score = 30.8 bits (68), Expect = 2.9
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 18 LPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAP 63
L P PPGP A GQA + RA RR A + + P P
Sbjct: 107 LVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPP 152
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 30.4 bits (67), Expect = 3.8
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 15 PLRLPPRPPGPRLA------SGQAAGALERAMDELLRRAVPPTPAYELREKTPAP 63
PL RPPGP L SG L + L + PPTP L+ PAP
Sbjct: 1059 PLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAP 1113
>gi|169162399 PREDICTED: hypothetical protein [Homo sapiens]
Length = 392
Score = 30.0 bits (66), Expect = 5.0
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 176 REMNGVLKGMLSEWFSSGFL-NLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGP 233
R + + +G+ W ++G +L + WH P + + S+ + P+++W +GP
Sbjct: 128 RPQSLLARGLGPNWLAAGGKRDLGQTGWHPPRSIKNRFSDGQQQQPIRDWGGGGINLGP 186
>gi|239747312 PREDICTED: hypothetical protein XP_002346417 [Homo
sapiens]
Length = 144
Score = 30.0 bits (66), Expect = 5.0
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 13/48 (27%)
Query: 16 LRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAP 63
L LP PPG R++ G A G PP PA R PAP
Sbjct: 53 LLLPAPPPGSRVSLGSAPGR-------------PPPPALAARRAPPAP 87
>gi|239741134 PREDICTED: hypothetical protein XP_002342117 [Homo
sapiens]
Length = 144
Score = 30.0 bits (66), Expect = 5.0
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 13/48 (27%)
Query: 16 LRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAP 63
L LP PPG R++ G A G PP PA R PAP
Sbjct: 53 LLLPAPPPGSRVSLGSAPGR-------------PPPPALAARRAPPAP 87
>gi|110349792 growth differentiation factor 1 [Homo sapiens]
Length = 372
Score = 30.0 bits (66), Expect = 5.0
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 14 LPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTP 61
LPL P PPGP A QA G + R VPP R + P
Sbjct: 24 LPLTRAPVPPGPAAALLQALGLRDEPQGAPRLRPVPPVMWRLFRRRDP 71
>gi|32880229 selenoprotein O [Homo sapiens]
Length = 669
Score = 30.0 bits (66), Expect = 5.0
Identities = 26/73 (35%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 5 GPGLTARRLLPL-RLPPRPPGPRLASGQAAGALER-----AMDELLRRAVP---PTPAYE 55
G L A RLLPL R P P SG A R D RA+P P P E
Sbjct: 9 GASLAAARLLPLGRCSPSPAPRSTLSGAAMEPAPRWLAGLRFDNRALRALPVEAPPPGPE 68
Query: 56 LREKTPAPAEGQC 68
P P G C
Sbjct: 69 GAPSAPRPVPGAC 81
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 30.0 bits (66), Expect = 5.0
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 15 PLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEGQCADFV 72
PL PP PGP LA G+ G LL ++ P P +L AP A F+
Sbjct: 575 PLLPPPGGPGPPLAPGEPEG------PSLLVASLLPPPPSDLLPPPSAPPSNLLASFL 626
>gi|169165478 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 29.6 bits (65), Expect = 6.6
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 17/61 (27%)
Query: 5 GPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
GPGL+ RR PL+L P P P R PPTP +R + PAP
Sbjct: 89 GPGLSGRRC-PLKLRPDAPVPGRT----------------RCRGPPTPVPAVRPRCPAPE 131
Query: 65 E 65
+
Sbjct: 132 D 132
>gi|239752721 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 6.6
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 13/52 (25%)
Query: 13 LLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
L+ L PRPPGP L + RA DELL P LRE P PA
Sbjct: 354 LVLLLAGPRPPGPDLVA--------RAYDELL-----PALERALREAEPGPA 392
>gi|169165887 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 29.6 bits (65), Expect = 6.6
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 17/61 (27%)
Query: 5 GPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
GPGL+ RR PL+L P P P R PPTP +R + PAP
Sbjct: 89 GPGLSGRRC-PLKLRPDAPVPGRT----------------RCRGPPTPVPAVRPRCPAPE 131
Query: 65 E 65
+
Sbjct: 132 D 132
>gi|239747261 PREDICTED: beta-lactamase-like protein
ENSP00000383859-like [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 6.6
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 13/52 (25%)
Query: 13 LLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPA 64
L+ L PRPPGP L + RA DELL P LRE P PA
Sbjct: 354 LVLLLAGPRPPGPDLVA--------RAYDELL-----PALERALREAEPGPA 392
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,694,742
Number of Sequences: 37866
Number of extensions: 919755
Number of successful extensions: 3140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 3116
Number of HSP's gapped (non-prelim): 62
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.