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Search of human proteins with 156523970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156523970 alpha-2-HS-glycoprotein [Homo sapiens]
(367 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156523970 alpha-2-HS-glycoprotein [Homo sapiens] 761 0.0
gi|58331240 fetuin B [Homo sapiens] 97 2e-20
gi|4504893 kininogen 1 isoform 2 [Homo sapiens] 43 4e-04
gi|156231037 kininogen 1 isoform 1 [Homo sapiens] 43 4e-04
gi|11415052 retinoid X receptor, beta [Homo sapiens] 40 0.003
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 40 0.004
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 40 0.004
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 40 0.004
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 40 0.004
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 39 0.007
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 39 0.007
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 39 0.007
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 39 0.007
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 39 0.007
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 39 0.007
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 39 0.007
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 39 0.007
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 39 0.007
gi|13129048 oligonucleotide/oligosaccharide-binding fold contain... 39 0.007
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 39 0.007
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 39 0.007
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 39 0.007
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.010
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.010
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.013
gi|55750053 atrophin-1 [Homo sapiens] 38 0.013
gi|55750041 atrophin-1 [Homo sapiens] 38 0.013
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 38 0.016
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 38 0.016
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 38 0.016
>gi|156523970 alpha-2-HS-glycoprotein [Homo sapiens]
Length = 367
Score = 761 bits (1965), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MKSLVLLLCLAQLWGCHSAPHGPGLIYRQPNCDDPETEEAALVAIDYINQNLPWGYKHTL 60
MKSLVLLLCLAQLWGCHSAPHGPGLIYRQPNCDDPETEEAALVAIDYINQNLPWGYKHTL
Sbjct: 1 MKSLVLLLCLAQLWGCHSAPHGPGLIYRQPNCDDPETEEAALVAIDYINQNLPWGYKHTL 60
Query: 61 NQIDEVKVWPQQPSGELFEIEIDTLETTCHVLDPTPVARCSVRQLKEHAVEGDCDFQLLK 120
NQIDEVKVWPQQPSGELFEIEIDTLETTCHVLDPTPVARCSVRQLKEHAVEGDCDFQLLK
Sbjct: 61 NQIDEVKVWPQQPSGELFEIEIDTLETTCHVLDPTPVARCSVRQLKEHAVEGDCDFQLLK 120
Query: 121 LDGKFSVVYAKCDSSPDSAEDVRKVCQDCPLLAPLNDTRVVHAAKAALAAFNAQNNGSNF 180
LDGKFSVVYAKCDSSPDSAEDVRKVCQDCPLLAPLNDTRVVHAAKAALAAFNAQNNGSNF
Sbjct: 121 LDGKFSVVYAKCDSSPDSAEDVRKVCQDCPLLAPLNDTRVVHAAKAALAAFNAQNNGSNF 180
Query: 181 QLEEISRAQLVPLPPSTYVEFTVSGTDCVAKEATEAAKCNLLAEKQYGFCKATLSEKLGG 240
QLEEISRAQLVPLPPSTYVEFTVSGTDCVAKEATEAAKCNLLAEKQYGFCKATLSEKLGG
Sbjct: 181 QLEEISRAQLVPLPPSTYVEFTVSGTDCVAKEATEAAKCNLLAEKQYGFCKATLSEKLGG 240
Query: 241 AEVAVTCMVFQTQPVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL 300
AEVAVTCMVFQTQPVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL
Sbjct: 241 AEVAVTCMVFQTQPVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL 300
Query: 301 LAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
LAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG
Sbjct: 301 LAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
Query: 361 RIRHFKV 367
RIRHFKV
Sbjct: 361 RIRHFKV 367
>gi|58331240 fetuin B [Homo sapiens]
Length = 382
Score = 97.1 bits (240), Expect = 2e-20
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 20/301 (6%)
Query: 5 VLLLCLAQLWGCHSAPHGPGLIYRQPNCDDPETEEAALVAIDYINQNLPWGYKHTLNQID 64
+L+LC + A + L+ R C+D + A A+ IN++ GY LN+++
Sbjct: 11 ILVLCCGAMSPPQLALNPSALLSR--GCNDSDVLAVAGFALRDINKDRKDGYVLRLNRVN 68
Query: 65 EVKVWPQQPSGELFEIEIDTLETTCHVLDPTPVARCSVRQLKEHAVEGDCDFQLLKLDGK 124
+ + + + G LF + +D LET CHVL C +R E +V G C + ++
Sbjct: 69 DAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFE-SVYGQCK-AIFYMNNP 126
Query: 125 FSVVYA---KCDSSPDSAEDVRKVCQDCPLLAPLNDT--RVVHAAKAALAAFNAQNNGSN 179
V+Y C P S + + C DCP P + + +V+ AA +LA +N +N
Sbjct: 127 SRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNNENTSKQ 186
Query: 180 FQLEEISRAQLV-PLPPSTYVEFTVSGTDCVAKEATEAAKCNLLAEKQ--YGFCKATLSE 236
+ L +++RA + PS +VE+ + + C ++A+ C+L + G CK +L+
Sbjct: 187 YSLFKVTRASSQWVVGPSYFVEYLIKESPCT---KSQASSCSLQSSDSVPVGLCKGSLTR 243
Query: 237 KLGGAEVAVTCMVFQTQPVSSQPQPEGANEAVPT---PVVDPDAPPSPPLGAPG-LPPAG 292
V+VTC F++Q ++ + N+ PT V + +PP +P P G
Sbjct: 244 THWEKFVSVTCDFFESQAPATGSENSAVNQK-PTNLPKVEESQQKNTPPTDSPSKAGPRG 302
Query: 293 S 293
S
Sbjct: 303 S 303
>gi|4504893 kininogen 1 isoform 2 [Homo sapiens]
Length = 427
Score = 43.1 bits (100), Expect = 4e-04
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 16/189 (8%)
Query: 35 PETEEAALVAIDYINQNLPWGYKHTLNQIDEVKVWPQQPSGELFEIEIDTLETTC---HV 91
P+ E I Y N N LN++ + Q +G F I ++T C +
Sbjct: 154 PDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQ--RQVVAGLNFRITYSIVQTNCSKENF 211
Query: 92 LDPTPVARCSVRQLKEHAVEGDC-DFQLLKLDGKFSVVYAKCDSSP--DSAEDVRKVCQD 148
L TP + + G+C D + + + + CD P D + K+C
Sbjct: 212 LFLTPDCKSLW-----NGDTGECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPPTKICVG 266
Query: 149 CPLLAPLNDTRVVHAAKAALAAFNAQNNGS-NFQLEEISRAQLVPLPPSTY-VEFTVSGT 206
CP P N + + NA+NN + F+++ + +A++ + Y ++F T
Sbjct: 267 CPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVARET 326
Query: 207 DCVAKEATE 215
C +KE+ E
Sbjct: 327 TC-SKESNE 334
Score = 28.5 bits (62), Expect = 10.0
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 156 NDTRVVHAAKAALAAFNAQNNGSN-FQLEEISRAQLVPLPPSTY-VEFTVSGTDCVAKEA 213
ND + A AAL +N+QN +N F L I+ A + Y ++ + DC +
Sbjct: 29 NDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEATKTVGSDTFYSFKYEIKEGDCPVQSG 88
Query: 214 TEAAKCNL--LAEKQYGFCKATLSEK 237
C A+ G C AT+ ++
Sbjct: 89 KTWQDCEYKDAAKAATGECTATVGKR 114
>gi|156231037 kininogen 1 isoform 1 [Homo sapiens]
Length = 644
Score = 43.1 bits (100), Expect = 4e-04
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 16/189 (8%)
Query: 35 PETEEAALVAIDYINQNLPWGYKHTLNQIDEVKVWPQQPSGELFEIEIDTLETTC---HV 91
P+ E I Y N N LN++ + Q +G F I ++T C +
Sbjct: 154 PDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQ--RQVVAGLNFRITYSIVQTNCSKENF 211
Query: 92 LDPTPVARCSVRQLKEHAVEGDC-DFQLLKLDGKFSVVYAKCDSSP--DSAEDVRKVCQD 148
L TP + + G+C D + + + + CD P D + K+C
Sbjct: 212 LFLTPDCKSLW-----NGDTGECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPPTKICVG 266
Query: 149 CPLLAPLNDTRVVHAAKAALAAFNAQNNGS-NFQLEEISRAQLVPLPPSTY-VEFTVSGT 206
CP P N + + NA+NN + F+++ + +A++ + Y ++F T
Sbjct: 267 CPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVARET 326
Query: 207 DCVAKEATE 215
C +KE+ E
Sbjct: 327 TC-SKESNE 334
Score = 28.5 bits (62), Expect = 10.0
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 156 NDTRVVHAAKAALAAFNAQNNGSN-FQLEEISRAQLVPLPPSTY-VEFTVSGTDCVAKEA 213
ND + A AAL +N+QN +N F L I+ A + Y ++ + DC +
Sbjct: 29 NDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEATKTVGSDTFYSFKYEIKEGDCPVQSG 88
Query: 214 TEAAKCNL--LAEKQYGFCKATLSEK 237
C A+ G C AT+ ++
Sbjct: 89 KTWQDCEYKDAAKAATGECTATVGKR 114
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 40.4 bits (93), Expect = 0.003
Identities = 40/115 (34%), Positives = 50/115 (43%), Gaps = 20/115 (17%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAH 313
P SS P P + VP P P PP PP AP L +G+PP + PP +
Sbjct: 83 PDSSSPNP--LPQGVPPP--SPPGPPLPPSTAPSLGGSGAPPPPP--MPPPP----LGSP 132
Query: 314 YDLRHTFMGVVSLGSP-----SGEVSHPRKTRTVVQPSVGAAAGP---VVPPCPG 360
+ + + MG L P SG VS P+ TV P G +GP V PP G
Sbjct: 133 FPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLP--GGGSGPPEDVKPPVLG 185
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 151 LLAPLNDTRVVHAAKAALAAFNAQNNGS---NFQLEEISRAQLVPLPPSTYVEFTVSGTD 207
L P++ + +A LA NA++ +FQ Q +PL +++T +D
Sbjct: 22 LFGPVDHEELSRELQARLAELNAEDQNRWDYDFQ-------QDMPLRGPGRLQWTEVDSD 74
Query: 208 CVA---KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGA 264
V +E + +C LL + +S L A ++ + + + S P P A
Sbjct: 75 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPA 134
Query: 265 NEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAP 304
+ P PV+ P P+P AP P +P VL AP
Sbjct: 135 STPPPVPVLAPAPAPAP---APVAAPVAAPVAVAVLAPAP 171
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 151 LLAPLNDTRVVHAAKAALAAFNAQNNGS---NFQLEEISRAQLVPLPPSTYVEFTVSGTD 207
L P++ + +A LA NA++ +FQ Q +PL +++T +D
Sbjct: 22 LFGPVDHEELSRELQARLAELNAEDQNRWDYDFQ-------QDMPLRGPGRLQWTEVDSD 74
Query: 208 CVA---KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGA 264
V +E + +C LL + +S L A ++ + + + S P P A
Sbjct: 75 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPA 134
Query: 265 NEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAP 304
+ P PV+ P P+P AP P +P VL AP
Sbjct: 135 STPPPVPVLAPAPAPAP---APVAAPVAAPVAVAVLAPAP 171
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 151 LLAPLNDTRVVHAAKAALAAFNAQNNGS---NFQLEEISRAQLVPLPPSTYVEFTVSGTD 207
L P++ + +A LA NA++ +FQ Q +PL +++T +D
Sbjct: 33 LFGPVDHEELSRELQARLAELNAEDQNRWDYDFQ-------QDMPLRGPGRLQWTEVDSD 85
Query: 208 CVA---KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGA 264
V +E + +C LL + +S L A ++ + + + S P P A
Sbjct: 86 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPA 145
Query: 265 NEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAP 304
+ P PV+ P P+P AP P +P VL AP
Sbjct: 146 STPPPVPVLAPAPAPAP---APVAAPVAAPVAVAVLAPAP 182
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 39.7 bits (91), Expect = 0.004
Identities = 41/167 (24%), Positives = 59/167 (35%), Gaps = 25/167 (14%)
Query: 194 PPSTYVE-FTVSGTDCVAKEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQT 252
PPS +V FT + A+ + ++LA Q +A L + +V T
Sbjct: 235 PPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQ---APKVPPT-----P 286
Query: 253 QPVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRA 312
+P+ G ++ P P+ P PP+P P LPP G P DS
Sbjct: 287 EPLPLSTPSAGTPQSQPPPL-PPPPPPAPGSAPPALPPEGPPEDS--------------- 330
Query: 313 HYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
DL +G S G +G T T + P P P
Sbjct: 331 SQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSAPGP 377
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/51 (47%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 259 PQPEGANEAVPTPVVDPDAPPSPPLGAPGLP-PAGSPPDSHVL---LAAPP 305
P P G P P PP PPLG PG P P G PP VL LA PP
Sbjct: 218 PGPAGPG-GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPP 267
Score = 32.0 bits (71), Expect = 0.90
Identities = 16/46 (34%), Positives = 18/46 (39%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHV 299
P P P G P + P +PP PG PP PP HV
Sbjct: 312 PQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV 357
Score = 28.9 bits (63), Expect = 7.6
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 248 MVFQTQPVSSQPQ-PEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPD-----SHVLL 301
++F QP P P P P P P PP P PP PP L
Sbjct: 277 VLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLT 336
Query: 302 AAPPGH 307
APP H
Sbjct: 337 LAPPPH 342
Score = 28.5 bits (62), Expect = 10.0
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 259 PQPEGANEAVPTPVVDPDAPP----SPPLGAPGLPPAGSPPD 296
P P A + P P + P PP PP G PP PP+
Sbjct: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPN 268
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 253 QPVSSQPQPEGANEA-VPTPVVDPDAPPSPPLGAPGLPPAGSPPD---SHVLLAA----- 303
QP QPQ G+ VP P P P P G PG P +PP S LLAA
Sbjct: 612 QPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVP 671
Query: 304 PPG 306
PPG
Sbjct: 672 PPG 674
Score = 29.3 bits (64), Expect = 5.8
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 255 VSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL---LAAPPGHQLHR 311
++S P P A PTPV PP P G P + S + PPG H
Sbjct: 583 LTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHP 642
Query: 312 AHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
P G + P + S+ AA V PP
Sbjct: 643 T---------------GPPGPIPVPAPPQIATSTSLLAAQSLVPPP 673
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 253 QPVSSQPQPEGANEA-VPTPVVDPDAPPSPPLGAPGLPPAGSPPD---SHVLLAA----- 303
QP QPQ G+ VP P P P P G PG P +PP S LLAA
Sbjct: 612 QPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVP 671
Query: 304 PPG 306
PPG
Sbjct: 672 PPG 674
Score = 29.3 bits (64), Expect = 5.8
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 255 VSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL---LAAPPGHQLHR 311
++S P P A PTPV PP P G P + S + PPG H
Sbjct: 583 LTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHP 642
Query: 312 AHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
P G + P + S+ AA V PP
Sbjct: 643 T---------------GPPGPIPVPAPPQIATSTSLLAAQSLVPPP 673
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 253 QPVSSQPQPEGANEA-VPTPVVDPDAPPSPPLGAPGLPPAGSPPD---SHVLLAA----- 303
QP QPQ G+ VP P P P P G PG P +PP S LLAA
Sbjct: 612 QPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVP 671
Query: 304 PPG 306
PPG
Sbjct: 672 PPG 674
Score = 29.3 bits (64), Expect = 5.8
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 255 VSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL---LAAPPGHQLHR 311
++S P P A PTPV PP P G P + S + PPG H
Sbjct: 583 LTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHP 642
Query: 312 AHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
P G + P + S+ AA V PP
Sbjct: 643 T---------------GPPGPIPVPAPPQIATSTSLLAAQSLVPPP 673
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 253 QPVSSQPQPEGANEA-VPTPVVDPDAPPSPPLGAPGLPPAGSPPD---SHVLLAA----- 303
QP QPQ G+ VP P P P P G PG P +PP S LLAA
Sbjct: 473 QPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVP 532
Query: 304 PPG 306
PPG
Sbjct: 533 PPG 535
Score = 29.3 bits (64), Expect = 5.8
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 255 VSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVL---LAAPPGHQLHR 311
++S P P A PTPV PP P G P + S + PPG H
Sbjct: 444 LTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHP 503
Query: 312 AHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
P G + P + S+ AA V PP
Sbjct: 504 T---------------GPPGPIPVPAPPQIATSTSLLAAQSLVPPP 534
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSPP-----------------LGAPGLP 289
TQ V P P G +V TPV P PP PP G PGLP
Sbjct: 629 TQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLP 688
Query: 290 -PAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVG 348
P G P + PPG + + + + +G P G P +P+V
Sbjct: 689 GPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEP-GLPGKPGLPGAKGEPAVA 747
Query: 349 AAAGPVVPPCPG 360
GP P PG
Sbjct: 748 MPGGPGTPGFPG 759
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 19/100 (19%)
Query: 262 EGANEAVPTPVVDPDAP-PSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTF 320
E +E P P A P P G PG+P GSP S L PG
Sbjct: 352 EKGDEGTPGPPGPRGARGPQGPSGPPGVP--GSPGSSRPGLRGAPGWP------------ 397
Query: 321 MGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L GE P K S G A P +P PG
Sbjct: 398 ----GLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPG 433
Score = 28.9 bits (63), Expect = 7.6
Identities = 34/118 (28%), Positives = 39/118 (33%), Gaps = 31/118 (26%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSP----PLGAPGLPPAGSPPDSHVLLA 302
T V P P+G + P DP +P SP P G PG P G P
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEP-------- 624
Query: 303 APPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L+ T GV P GE PR +V P G P P PG
Sbjct: 625 ------------GLQGT-QGVPGAPGPPGEAG-PRGELSVSTPVPGPPGPPGPPGHPG 668
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSPP-----------------LGAPGLP 289
TQ V P P G +V TPV P PP PP G PGLP
Sbjct: 629 TQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLP 688
Query: 290 -PAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVG 348
P G P + PPG + + + + +G P G P +P+V
Sbjct: 689 GPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEP-GLPGKPGLPGAKGEPAVA 747
Query: 349 AAAGPVVPPCPG 360
GP P PG
Sbjct: 748 MPGGPGTPGFPG 759
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 19/100 (19%)
Query: 262 EGANEAVPTPVVDPDAP-PSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTF 320
E +E P P A P P G PG+P GSP S L PG
Sbjct: 352 EKGDEGTPGPPGPRGARGPQGPSGPPGVP--GSPGSSRPGLRGAPGWP------------ 397
Query: 321 MGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L GE P K S G A P +P PG
Sbjct: 398 ----GLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPG 433
Score = 28.9 bits (63), Expect = 7.6
Identities = 34/118 (28%), Positives = 39/118 (33%), Gaps = 31/118 (26%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSP----PLGAPGLPPAGSPPDSHVLLA 302
T V P P+G + P DP +P SP P G PG P G P
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEP-------- 624
Query: 303 APPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L+ T GV P GE PR +V P G P P PG
Sbjct: 625 ------------GLQGT-QGVPGAPGPPGEAG-PRGELSVSTPVPGPPGPPGPPGHPG 668
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSPP-----------------LGAPGLP 289
TQ V P P G +V TPV P PP PP G PGLP
Sbjct: 629 TQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLP 688
Query: 290 -PAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVG 348
P G P + PPG + + + + +G P G P +P+V
Sbjct: 689 GPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEP-GLPGKPGLPGAKGEPAVA 747
Query: 349 AAAGPVVPPCPG 360
GP P PG
Sbjct: 748 MPGGPGTPGFPG 759
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 19/100 (19%)
Query: 262 EGANEAVPTPVVDPDAP-PSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTF 320
E +E P P A P P G PG+P GSP S L PG
Sbjct: 352 EKGDEGTPGPPGPRGARGPQGPSGPPGVP--GSPGSSRPGLRGAPGWP------------ 397
Query: 321 MGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L GE P K S G A P +P PG
Sbjct: 398 ----GLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPG 433
Score = 28.9 bits (63), Expect = 7.6
Identities = 34/118 (28%), Positives = 39/118 (33%), Gaps = 31/118 (26%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSP----PLGAPGLPPAGSPPDSHVLLA 302
T V P P+G + P DP +P SP P G PG P G P
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEP-------- 624
Query: 303 APPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L+ T GV P GE PR +V P G P P PG
Sbjct: 625 ------------GLQGT-QGVPGAPGPPGEAG-PRGELSVSTPVPGPPGPPGPPGHPG 668
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSPP-----------------LGAPGLP 289
TQ V P P G +V TPV P PP PP G PGLP
Sbjct: 629 TQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLP 688
Query: 290 -PAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVG 348
P G P + PPG + + + + +G P G P +P+V
Sbjct: 689 GPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEP-GLPGKPGLPGAKGEPAVA 747
Query: 349 AAAGPVVPPCPG 360
GP P PG
Sbjct: 748 MPGGPGTPGFPG 759
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 19/100 (19%)
Query: 262 EGANEAVPTPVVDPDAP-PSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTF 320
E +E P P A P P G PG+P GSP S L PG
Sbjct: 352 EKGDEGTPGPPGPRGARGPQGPSGPPGVP--GSPGSSRPGLRGAPGWP------------ 397
Query: 321 MGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L GE P K S G A P +P PG
Sbjct: 398 ----GLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPG 433
Score = 28.9 bits (63), Expect = 7.6
Identities = 34/118 (28%), Positives = 39/118 (33%), Gaps = 31/118 (26%)
Query: 252 TQPVSSQPQPEG-----ANEAVPTPVVDPDAPPSP----PLGAPGLPPAGSPPDSHVLLA 302
T V P P+G + P DP +P SP P G PG P G P
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEP-------- 624
Query: 303 APPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCPG 360
L+ T GV P GE PR +V P G P P PG
Sbjct: 625 ------------GLQGT-QGVPGAPGPPGEAG-PRGELSVSTPVPGPPGPPGPPGHPG 668
>gi|13129048 oligonucleotide/oligosaccharide-binding fold containing
2B [Homo sapiens]
Length = 211
Score = 38.9 bits (89), Expect = 0.007
Identities = 33/114 (28%), Positives = 40/114 (35%), Gaps = 22/114 (19%)
Query: 247 CMVFQTQPVSSQPQPEGANEAVPTPVVDPDAPPS---PPLGAPGLPPAGSPPDSHVLLAA 303
CMV+ P S+P PE + + P V D+ PS P G PA + + L A
Sbjct: 99 CMVYSEVPNFSEPNPEYSTQQAPNKAVQNDSNPSASQPTTGPSAASPASENQNGNGLSAP 158
Query: 304 P-PGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVP 356
P PG H H SHP TR AGP P
Sbjct: 159 PGPGGGPHPPH------------------TPSHPPSTRITRSQPNHTPAGPPGP 194
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 38.9 bits (89), Expect = 0.007
Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 211 KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGANEAVPT 270
+EA E + LLA++Q A E+L AE+ FQ Q P
Sbjct: 948 REALEYQRQQLLADRQ-----AFHMEQLKYAEMRARQQHFQQMHQQQQQPP--------- 993
Query: 271 PVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPS 330
P + P + P PP GA G PP H L AP A +G +
Sbjct: 994 PALPPGSQPIPPTGAAG------PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
Query: 331 GEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
G + P++ + P GA V PP P
Sbjct: 1048 GSTAGPQQQQPAGAPQPGAVPPGVPPPGP 1076
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 38.9 bits (89), Expect = 0.007
Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 211 KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGANEAVPT 270
+EA E + LLA++Q A E+L AE+ FQ Q P
Sbjct: 917 REALEYQRQQLLADRQ-----AFHMEQLKYAEMRARQQHFQQMHQQQQQPP--------- 962
Query: 271 PVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPS 330
P + P + P PP GA G PP H L AP A +G +
Sbjct: 963 PALPPGSQPIPPTGAAG------PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1016
Query: 331 GEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
G + P++ + P GA V PP P
Sbjct: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGP 1045
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 278 PPSPPLGAPGLPPAGSPPDS-HVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPSGEVSHP 336
PP PP AP + P GS DS + L APP H H + +L HP
Sbjct: 1086 PPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHP 1145
Query: 337 RKTRTVVQPS 346
T PS
Sbjct: 1146 NLPATTTMPS 1155
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 38.9 bits (89), Expect = 0.007
Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 211 KEATEAAKCNLLAEKQYGFCKATLSEKLGGAEVAVTCMVFQTQPVSSQPQPEGANEAVPT 270
+EA E + LLA++Q A E+L AE+ FQ Q P
Sbjct: 948 REALEYQRQQLLADRQ-----AFHMEQLKYAEMRARQQHFQQMHQQQQQPP--------- 993
Query: 271 PVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVSLGSPS 330
P + P + P PP GA G PP H L AP A +G +
Sbjct: 994 PALPPGSQPIPPTGAAG------PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
Query: 331 GEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
G + P++ + P GA V PP P
Sbjct: 1048 GSTAGPQQQQPAGAPQPGAVPPGVPPPGP 1076
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.010
Identities = 35/113 (30%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-------DAPPSPPLGAPGLPPAGSPPDSHVLLAAPPG 306
P S P + A P P V P PPSPP P P A PP + LA PP
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPL 797
Query: 307 HQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
L +F G + P T P V AA VPP P
Sbjct: 798 QALPSP----PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 846
Score = 37.7 bits (86), Expect = 0.016
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-------DAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
P S P + A P P P PPSPP P P A PP LLAAPP
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP 765
Score = 35.0 bits (79), Expect = 0.11
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
P ++ P + A P V P P SPP+ PP +PP LAAPP
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP----LAAPP 734
Score = 34.3 bits (77), Expect = 0.18
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDS----HVLLAAPPGHQL 309
P+++ P A P V P P SP L AP PP P S + LA PG
Sbjct: 823 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQ-PSVGAAAGPVVPP 357
+ T G G S S P + R P GAAA P PP
Sbjct: 883 PPSR-SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP--PP 928
Score = 33.9 bits (76), Expect = 0.24
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 257 SQPQPEGANEAVPTPVVDPDAPPSPPLGA--PGLPPAGSPPDSHVLLAAPP 305
++P P N A P P PPSPPL P PP+ S P S L +PP
Sbjct: 314 ARPVPPPDNAATPLPATL---PPSPPLATPLPLAPPSPSAPPSLQTLPSPP 361
Score = 31.6 bits (70), Expect = 1.2
Identities = 36/132 (27%), Positives = 49/132 (37%), Gaps = 31/132 (23%)
Query: 254 PVSSQPQPEGANEAVPTPVV--DPDAPPS----------PPLGAP---GLPPAGSPPDSH 298
P + P P A P P+ P APPS PP AP PP +PP
Sbjct: 328 PATLPPSPP---LATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 299 VLLAAPPGHQLHRAHYD------LRHTFMGVVSLGSPSGEVSH------PRKTR-TVVQP 345
+ H L + SLGSP+ + +H PR+T+ ++ P
Sbjct: 385 TIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP 444
Query: 346 SVGAAAGPVVPP 357
S A+ P PP
Sbjct: 445 SRPASTPPDSPP 456
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 244 AVTCMVFQTQPVSSQPQPEGANEAVPTPVVDPDAPPSP-PLGAPGLPPAGSPPDSHVLLA 302
++T + P + P + A+ + TP ++ P+P PL AP P PP++ +A
Sbjct: 529 SLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA 588
Query: 303 APP 305
PP
Sbjct: 589 TPP 591
Score = 29.6 bits (65), Expect = 4.5
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-------DAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
P+++ P ++ A P P P PSPPL PP +PP LA PP
Sbjct: 575 PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPP----XLALPP 629
Score = 29.6 bits (65), Expect = 4.5
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 269 PTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
P P AP SPP P P A P + LAAPP
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703
Score = 29.3 bits (64), Expect = 5.8
Identities = 31/113 (27%), Positives = 38/113 (33%), Gaps = 11/113 (9%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-------DAPPSPPLGAPGLPPAGSPPDSHVLLAAPPG 306
P+ P P + A P P P APPSPP P P A P + LA
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAV--- 658
Query: 307 HQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
L +A + + P+ P T P AA VPP P
Sbjct: 659 -HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.5 bits (88), Expect = 0.010
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 257 SQPQPEGANEAVPTPVVDPDAPPSPPLG----------APGLPPAGSPPDSHVLLAAPPG 306
SQP+P+G P V P +P LG +P PP+ S P S L +PP
Sbjct: 261 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA 320
Query: 307 HQLHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
+A SLGSP+ + +H + P A P PP
Sbjct: 321 TPPSQA----------TTSLGSPTLQATHSFLPSPPLSPL--ATPPPQAPP 359
Score = 38.1 bits (87), Expect = 0.013
Identities = 33/106 (31%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAH 313
P+ P P + P+ P APP PL AP L A PP + LA PP L
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPP--PLAAPPLQLAKPPPQAPPALATPPLQALPSP- 495
Query: 314 YDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
+F G + P T P V AA VPP P
Sbjct: 496 ---PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 538
Score = 36.2 bits (82), Expect = 0.048
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-DAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
PVS P ++A P+ P PPSPP P P A PP + LAAPP
Sbjct: 420 PVSPSATPP--SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 470
Score = 34.3 bits (77), Expect = 0.18
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDS----HVLLAAPPGHQL 309
P+++ P A P V P P SP L AP PP P S + LA PG
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQ-PSVGAAAGPVVPP 357
+ T G G S S P + R P GAAA P PP
Sbjct: 575 PPSR-SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP--PP 620
Score = 30.8 bits (68), Expect = 2.0
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 269 PTPVVDPDAPPS---PPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVS 325
P P APP+ PPL AP PPA SPP S + +P H L+ F S
Sbjct: 349 PLATPPPQAPPALALPPLQAPPSPPA-SPPLSPLATPSPQAPNALAVHL-LQAPFSPPPS 406
Query: 326 --LGSPSGEVSHPRKTRTVVQPS---VGAAAGPV-VPPCP 359
+ +P + P + + PS AA P+ VPP P
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 446
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 18/67 (26%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAP---------------PSPPLGAPGLPPAGSPPDSH 298
P+ + P P + P P AP PSPP+ AP PPA SPP S
Sbjct: 365 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA-SPPVSP 423
Query: 299 VLLAAPP 305
A PP
Sbjct: 424 --SATPP 428
Score = 28.5 bits (62), Expect = 10.0
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 251 QTQPVSSQPQPEGANEAVPTPVVDPDAP--PSPPLGAPGLPPAGSPPDSHVLLAAPP 305
QT P P A ++ +P + PSPPL PP +PP LA PP
Sbjct: 313 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP----ALALPP 365
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.1 bits (87), Expect = 0.013
Identities = 33/106 (31%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAH 313
P+ P P + P+ P APP PL AP L A PP + LA PP L
Sbjct: 478 PLQVPPSPPASPPMSPSATPPPQAPP--PLAAPPLQLAKPPPQAPPALATPPLQALPSP- 534
Query: 314 YDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPPCP 359
+F G + P T P V AA VPP P
Sbjct: 535 ---PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 577
Score = 36.2 bits (82), Expect = 0.048
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 254 PVSSQPQPEGANEAVPTPVVDP-DAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305
PVS P ++A P+ P PPSPP P P A PP + LAAPP
Sbjct: 459 PVSPSATPP--SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 509
Score = 34.3 bits (77), Expect = 0.18
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDS----HVLLAAPPGHQL 309
P+++ P A P V P P SP L AP PP P S + LA PG
Sbjct: 554 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 613
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQ-PSVGAAAGPVVPP 357
+ T G G S S P + R P GAAA P PP
Sbjct: 614 PPSR-SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP--PP 659
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 257 SQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLA-APP 305
SQP+P+G P V P +P LG P +P S L + APP
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319
Score = 30.8 bits (68), Expect = 2.0
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 269 PTPVVDPDAPPS---PPLGAPGLPPAGSPPDSHVLLAAPPGHQLHRAHYDLRHTFMGVVS 325
P P APP+ PPL AP PPA SPP S + +P H L+ F S
Sbjct: 388 PLATPPPQAPPALALPPLQAPPSPPA-SPPLSPLATPSPQAPNALAVHL-LQAPFSPPPS 445
Query: 326 --LGSPSGEVSHPRKTRTVVQPS---VGAAAGPV-VPPCP 359
+ +P + P + + PS AA P+ VPP P
Sbjct: 446 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 485
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 18/67 (26%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAP---------------PSPPLGAPGLPPAGSPPDSH 298
P+ + P P + P P AP PSPP+ AP PPA SPP S
Sbjct: 404 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA-SPPVSP 462
Query: 299 VLLAAPP 305
A PP
Sbjct: 463 --SATPP 467
Score = 28.5 bits (62), Expect = 10.0
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 251 QTQPVSSQPQPEGANEAVPTPVVDPDAP--PSPPLGAPGLPPAGSPPDSHVLLAAPP 305
QT P P A ++ +P + PSPPL PP +PP LA PP
Sbjct: 352 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP----ALALPP 404
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 38.1 bits (87), Expect = 0.013
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 253 QPVSSQP-QPEGANEAVPTPVVDPD---APPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQ 308
QP S P QPE + E P P V P AP PP P G+PP L G
Sbjct: 170 QPPDSTPRQPEASFE--PHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGV 227
Query: 309 LHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
L + S+G P+G HP T + S GA+ P P
Sbjct: 228 LSGPPMGPKGGG-AASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKP 275
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 38.1 bits (87), Expect = 0.013
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 253 QPVSSQP-QPEGANEAVPTPVVDPD---APPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQ 308
QP S P QPE + E P P V P AP PP P G+PP L G
Sbjct: 170 QPPDSTPRQPEASFE--PHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGV 227
Query: 309 LHRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGPVVPP 357
L + S+G P+G HP T + S GA+ P P
Sbjct: 228 LSGPPMGPKGGG-AASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKP 275
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 253 QPVSSQPQPEGANEAVPTPVVDPD---APPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQL 309
+ ++ P P +A P+ P+ APP+PP P P + +PP++ AAPP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET---TAAPPTPS- 242
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGP---VVPPCP 359
T + S P P + T + PS A+A P PP P
Sbjct: 243 -------ATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP 287
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPS---PP--LGAPGLPPA--GSPPDSHV---LLAA 303
PV+S P P+ A PTP APPS PP AP P A +PP S AA
Sbjct: 156 PVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
Query: 304 PP 305
PP
Sbjct: 215 PP 216
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 256 SSQPQPEGANEAVPTPVVDPDAPPSPP-----LGAPGLPPAGSP----PDSHVLLAAP 304
SS P A PTP APPS P AP P SP PD+ AAP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 253 QPVSSQPQPEGANEAVPTPVVDPD---APPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQL 309
+ ++ P P +A P+ P+ APP+PP P P + +PP++ AAPP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET---TAAPPTPS- 242
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGP---VVPPCP 359
T + S P P + T + PS A+A P PP P
Sbjct: 243 -------ATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP 287
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPS---PP--LGAPGLPPA--GSPPDSHV---LLAA 303
PV+S P P+ A PTP APPS PP AP P A +PP S AA
Sbjct: 156 PVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
Query: 304 PP 305
PP
Sbjct: 215 PP 216
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 256 SSQPQPEGANEAVPTPVVDPDAPPSPP-----LGAPGLPPAGSP----PDSHVLLAAP 304
SS P A PTP APPS P AP P SP PD+ AAP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 253 QPVSSQPQPEGANEAVPTPVVDPD---APPSPPLGAPGLPPAGSPPDSHVLLAAPPGHQL 309
+ ++ P P +A P+ P+ APP+PP P P + +PP++ AAPP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET---TAAPPTPS- 242
Query: 310 HRAHYDLRHTFMGVVSLGSPSGEVSHPRKTRTVVQPSVGAAAGP---VVPPCP 359
T + S P P + T + PS A+A P PP P
Sbjct: 243 -------ATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP 287
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 254 PVSSQPQPEGANEAVPTPVVDPDAPPS---PP--LGAPGLPPA--GSPPDSHV---LLAA 303
PV+S P P+ A PTP APPS PP AP P A +PP S AA
Sbjct: 156 PVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
Query: 304 PP 305
PP
Sbjct: 215 PP 216
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 256 SSQPQPEGANEAVPTPVVDPDAPPSPP-----LGAPGLPPAGSP----PDSHVLLAAP 304
SS P A PTP APPS P AP P SP PD+ AAP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,731,336
Number of Sequences: 37866
Number of extensions: 994352
Number of successful extensions: 10847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 7264
Number of HSP's gapped (non-prelim): 3050
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.