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Search of human proteins with 156523262
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo sapi... 431 e-121
gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo sapi... 357 5e-99
gi|41281907 StAR-related lipid transfer (START) domain containin... 33 0.18
gi|16445031 StAR-related lipid transfer (START) domain containin... 33 0.18
gi|41281898 StAR-related lipid transfer (START) domain containin... 33 0.18
gi|239752328 PREDICTED: hypothetical protein XP_002348200 [Homo ... 32 0.31
gi|239746841 PREDICTED: hypothetical protein XP_002344236 [Homo ... 32 0.31
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 30 1.2
gi|215820652 StAR-related lipid transfer (START) domain containi... 30 2.0
gi|215820650 StAR-related lipid transfer (START) domain containi... 30 2.0
gi|31543659 StAR-related lipid transfer (START) domain containin... 30 2.0
gi|24497497 solute carrier family 22 member 7 isoform a [Homo sa... 29 2.6
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 29 3.4
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 29 3.4
gi|21362070 hypothetical protein LOC79034 [Homo sapiens] 29 3.4
gi|156119615 myosin IXA [Homo sapiens] 28 5.8
gi|5729862 stem-loop (histone) binding protein [Homo sapiens] 28 5.8
gi|166235129 kelch-like 3 [Homo sapiens] 28 5.8
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... 28 7.6
gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ... 28 7.6
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ... 28 7.6
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ... 28 7.6
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ... 28 7.6
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ... 28 7.6
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ... 28 7.6
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ... 28 7.6
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ... 28 7.6
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ... 28 7.6
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ... 28 7.6
gi|45827729 scribble isoform b [Homo sapiens] 28 7.6
>gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
sapiens]
Length = 213
Score = 431 bits (1108), Expect = e-121
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ 60
MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ
Sbjct: 1 MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ 60
Query: 61 GGWAGDSVKASNGTQTGKQQLDLNACYHKTHHRDLGLASLEEADIPIIPDLEEVQEEDFV 120
GGWAGDSVKASNGTQTGKQQLDLNACYHKTHHRDLGLASLEEADIPIIPDLEEVQEEDFV
Sbjct: 61 GGWAGDSVKASNGTQTGKQQLDLNACYHKTHHRDLGLASLEEADIPIIPDLEEVQEEDFV 120
Query: 121 LQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGWD 180
LQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGWD
Sbjct: 121 LQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGWD 180
Query: 181 WDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT 213
WDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT
Sbjct: 181 WDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT 213
>gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo
sapiens]
Length = 208
Score = 357 bits (915), Expect = 5e-99
Identities = 184/214 (85%), Positives = 189/214 (88%), Gaps = 7/214 (3%)
Query: 1 MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ 60
MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ
Sbjct: 1 MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQ 60
Query: 61 GGWAGDSVKASNGTQTGKQQL-DLNACYHKTHHRDLGLASLEEADIPIIPDLEEVQEEDF 119
GGWAGDSVKAS + +++ D + D G DIPIIPDLEEVQEEDF
Sbjct: 61 GGWAGDSVKASKFRRKASEEIEDFRLRPQSLNGSDYG------GDIPIIPDLEEVQEEDF 114
Query: 120 VLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGW 179
VLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGW
Sbjct: 115 VLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVREDDVGW 174
Query: 180 DWDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT 213
DWDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT
Sbjct: 175 DWDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT 208
>gi|41281907 StAR-related lipid transfer (START) domain containing
13 isoform beta [Homo sapiens]
Length = 1105
Score = 33.1 bits (74), Expect = 0.18
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 121 LQVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL 159
++V APPS+ + RV+ R L D D +++ ++TLD + ++
Sbjct: 949 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEI 988
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 33.1 bits (74), Expect = 0.18
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 121 LQVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL 159
++V APPS+ + RV+ R L D D +++ ++TLD + ++
Sbjct: 839 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEI 878
>gi|41281898 StAR-related lipid transfer (START) domain containing
13 isoform alpha [Homo sapiens]
Length = 1113
Score = 33.1 bits (74), Expect = 0.18
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 121 LQVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL 159
++V APPS+ + RV+ R L D D +++ ++TLD + ++
Sbjct: 957 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEI 996
>gi|239752328 PREDICTED: hypothetical protein XP_002348200 [Homo
sapiens]
Length = 174
Score = 32.3 bits (72), Expect = 0.31
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 47 TGETSSAKLPRCRQGGWAGDSVKASNGTQTG 77
T T +++ P+C GG AG S +A+ G TG
Sbjct: 29 TSSTKASEEPKCESGGQAGTSTEATTGAGTG 59
>gi|239746841 PREDICTED: hypothetical protein XP_002344236 [Homo
sapiens]
Length = 174
Score = 32.3 bits (72), Expect = 0.31
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 47 TGETSSAKLPRCRQGGWAGDSVKASNGTQTG 77
T T +++ P+C GG AG S +A+ G TG
Sbjct: 29 TSSTKASEEPKCESGGQAGTSTEATTGAGTG 59
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 30.4 bits (67), Expect = 1.2
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 19 RAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQGGWAGDSVKASNGTQTGK 78
R + ++ ++ + L GKN S+ G P + K +NG Q K
Sbjct: 293 RQPLQQKPYNNHSEMSDLLKGKNQSMRGNGRKQYQDSPNQK---------KRTNGLQPAK 343
Query: 79 QQLDLNACYHKTHHRDL 95
QQ L C K H R L
Sbjct: 344 QQNSLMKCEKKLHPRKL 360
>gi|215820652 StAR-related lipid transfer (START) domain containing
8 isoform b [Homo sapiens]
Length = 1023
Score = 29.6 bits (65), Expect = 2.0
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 122 QVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL-KLLTKVLAPEHEVRE 174
+VAAPP++ + RV+ R L D DL++ ++ L ++L +T +AP H R+
Sbjct: 868 EVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAP-HPCRD 921
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 29.6 bits (65), Expect = 2.0
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 122 QVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL-KLLTKVLAPEHEVRE 174
+VAAPP++ + RV+ R L D DL++ ++ L ++L +T +AP H R+
Sbjct: 948 EVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAP-HPCRD 1001
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 29.6 bits (65), Expect = 2.0
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 122 QVAAPPSIQIKRVMTYRDL-DNDLMKYSAIQTLDGEIDL-KLLTKVLAPEHEVRE 174
+VAAPP++ + RV+ R L D DL++ ++ L ++L +T +AP H R+
Sbjct: 868 EVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAP-HPCRD 921
>gi|24497497 solute carrier family 22 member 7 isoform a [Homo
sapiens]
Length = 546
Score = 29.3 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 178 GWDWDHLFTEVSSEVLTEWDPLQTEK 203
GW++DH +E SS + TEWD + +K
Sbjct: 116 GWEYDH--SEFSSTIATEWDLVCEQK 139
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 28.9 bits (63), Expect = 3.4
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 98 ASLEEADIPIIPDLEEVQEEDFVLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTL---- 153
A LE D D+EE+ EED +V PPS+ ++ T + DLM Y+ Q+
Sbjct: 1285 AELEGGD----DDIEEMGEEDS--EVIEPPSLP--QLQTPLASELDLMPYTPPQSTPKSA 1336
Query: 154 ------DGEIDLKLLTKVLAPEHEVREDDVGWDWDHLFTEVSSEVLTEWDPLQTEKE 204
+G ++ + E+R D+ F E+S V TEW L+T K+
Sbjct: 1337 KGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKK 1393
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 28.9 bits (63), Expect = 3.4
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 98 ASLEEADIPIIPDLEEVQEEDFVLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTL---- 153
A LE D D+EE+ EED +V PPS+ ++ T + DLM Y+ Q+
Sbjct: 1317 AELEGGD----DDIEEMGEEDS--EVIEPPSLP--QLQTPLASELDLMPYTPPQSTPKSA 1368
Query: 154 ------DGEIDLKLLTKVLAPEHEVREDDVGWDWDHLFTEVSSEVLTEWDPLQTEKE 204
+G ++ + E+R D+ F E+S V TEW L+T K+
Sbjct: 1369 KGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKK 1425
>gi|21362070 hypothetical protein LOC79034 [Homo sapiens]
Length = 449
Score = 28.9 bits (63), Expect = 3.4
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 83 LNACYHKTHHRDLGLAS-LEEADIPIIPDLEEVQEEDFVLQVAAPPSIQIKRVMTYRDLD 141
L+A +H D+ +S L+ A +PI+ E+FV QV S Q KR+ + ++L
Sbjct: 14 LSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVFQVPKERSAQPKRLNSLQELQ 73
Query: 142 --NDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVRED 175
+ Y QT D + + + + +P+ +D
Sbjct: 74 LLEIMCNYFQEQTKDSVRQI-IFSSLFSPQGNKADD 108
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 28.1 bits (61), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 84 NACYHKTHHRDLGLASLEEADIPIIPDLEEVQEE 117
N CY K +RD + +PI+ +L EV+EE
Sbjct: 431 NICYKKKTYRDDSIDICNPEVLPIVSELLEVKEE 464
>gi|5729862 stem-loop (histone) binding protein [Homo sapiens]
Length = 270
Score = 28.1 bits (61), Expect = 5.8
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 12 RYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQGGWAGDSVKAS 71
R+SL R GRR + E A+ H + + T T PR R WA +
Sbjct: 26 RWSLGRKRRADGRRWRPEDAEEAEHRGAERRPESFT--TPEGPKPRSRCSDWASAVEEDE 83
Query: 72 NGTQTGKQ 79
T+ K+
Sbjct: 84 MRTRVNKE 91
>gi|166235129 kelch-like 3 [Homo sapiens]
Length = 587
Score = 28.1 bits (61), Expect = 5.8
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 65 GDSVKASNGT--QTGKQQLDLNACYHKTHHRDLGLASLEE-------ADIPIIPDLEEVQ 115
G+SVK S+ T Q G + + H + E D+ I+ + E++
Sbjct: 3 GESVKLSSQTLIQAGDDEKNQRTITVNPAHMGKAFKVMNELRSKQLLCDVMIVAEDVEIE 62
Query: 116 EEDFVLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPEHEVRED 175
VL +P M D+ K I+ +DG+ KL+ + E EV E+
Sbjct: 63 AHRVVLAACSPYFC----AMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIEVTEE 118
Query: 176 DV 177
+V
Sbjct: 119 NV 120
>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
sapiens]
Length = 438
Score = 27.7 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1 MEDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNS 42
MEDLL +Y L T ++ E QA LNG+NS
Sbjct: 210 MEDLLQSSVPWKYFLNTCGTDFPIKSNAEMVQALKMLNGRNS 251
>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFDETEWNELE 45
>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
Length = 97
Score = 27.7 bits (60), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
D +GWDW+ ++ + TEW+ L+
Sbjct: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 27.7 bits (60), Expect = 7.6
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 2 EDLLDLDEELRYSLATSRAKMGRRAQQESAQAENHLNGKNSSLTLTGETSSAKLPRCRQG 61
+DL + EE L RA+M R A + A+A L L GET + Q
Sbjct: 1383 DDLRKMQEEEARKLQQKRAQMLREAAEAGAEAR---------LALDGETLGEEEQEDEQP 1433
Query: 62 GWAGDS 67
WA S
Sbjct: 1434 PWASPS 1439
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,780,397
Number of Sequences: 37866
Number of extensions: 311479
Number of successful extensions: 725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 705
Number of HSP's gapped (non-prelim): 38
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.