Guide to the Human Genome
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Name: DCP2 Sequence: fasta or formatted (420aa) NCBI GI: 31542498
Description:

DCP2 decapping enzyme

Referenced in:

Nucleotide Pathways
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         19           2
 C cysteine            2.4         10           1
 D aspartate           7.1         30           2
 E glutamate           6.4         27           2
 F phenylalanine       6.0         25           2
 G glycine             5.7         24           1
 H histidine           2.9         12           1
 I isoleucine          5.2         22           2
 K lysine              8.6         36           2
 L leucine             8.8         37           2
 M methionine          2.1          9           1
 N asparagine          4.8         20           2
 P proline             6.9         29           1
 Q glutamine           5.2         22           2
 R arginine            5.7         24           2
 S serine              6.7         28           3
 T threonine           3.3         14           1
 V valine              3.6         15           1
 W tryptophan          1.4          6           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DCP2 decapping enzyme 
NUDT6                 0.018   nudix-type motif 6 isoform a 
NUDT4                 0.016   nudix-type motif 4 isoform beta 
NUDT11                0.013   nudix-type motif 11 
NUDT4                 0.013   nudix-type motif 4 isoform alpha 
NUDT10                0.012   nudix-type motif 10 
NUDT6                 0.009   nudix-type motif 6 isoform b 
NUDT3                 0.009   nudix-type motif 3 
C14orf179             0.006   hypothetical protein LOC112752 isoform 1 
SFRS4                 0.006   splicing factor, arginine/serine-rich 4 
LOC100293409          0.006   PREDICTED: similar to Mucin-19 
LOC100291118          0.006   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.006   PREDICTED: hypothetical protein XP_002343203 
NMT1                  0.006   N-myristoyltransferase 1 
NUDT5                 0.005   nudix-type motif 5 
FHOD3                 0.005   formin homology 2 domain containing 3 
RGS12                 0.005   regulator of G-protein signalling 12 isoform 2 
RGS12                 0.005   regulator of G-protein signalling 12 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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