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Search of human proteins with 154937348
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154937348 phytanoyl-CoA dioxygenase domain containing 1
isoform b [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154937348 phytanoyl-CoA dioxygenase domain containing 1 isofo... 619 e-177
gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isofo... 295 4e-80
gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isofo... 253 1e-67
gi|239753274 PREDICTED: hypothetical protein [Homo sapiens] 36 0.036
gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo ... 36 0.036
gi|169217677 PREDICTED: hypothetical protein [Homo sapiens] 36 0.047
gi|113430753 PREDICTED: hypothetical protein [Homo sapiens] 35 0.079
gi|239747153 PREDICTED: hypothetical protein XP_002343929 [Homo ... 35 0.079
gi|110735441 ADAM metallopeptidase with thrombospondin type 1 mo... 33 0.39
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.52
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.52
gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot... 32 0.67
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot... 32 0.67
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 32 0.67
gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens] 31 1.1
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ... 31 1.1
gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ... 31 1.1
gi|193211603 pleckstrin homology domain containing, family G (wi... 31 1.1
gi|193211598 pleckstrin homology domain containing, family G (wi... 31 1.1
gi|193211596 pleckstrin homology domain containing, family G (wi... 31 1.1
gi|193211594 pleckstrin homology domain containing, family G (wi... 31 1.1
gi|55742734 pleckstrin homology domain containing, family G (wit... 31 1.1
gi|134031945 SCO-spondin [Homo sapiens] 31 1.1
gi|31542760 hypothetical protein LOC220108 [Homo sapiens] 31 1.1
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
gi|169171483 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
>gi|154937348 phytanoyl-CoA dioxygenase domain containing 1 isoform
b [Homo sapiens]
Length = 297
Score = 619 bits (1595), Expect = e-177
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
Query: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
Query: 121 FKVQTLARSLGLQMPVVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVS 180
FKVQTLARSLGLQMPVVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVS
Sbjct: 121 FKVQTLARSLGLQMPVVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVS 180
Query: 181 GSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTR 240
GSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTR
Sbjct: 181 GSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTR 240
Query: 241 ASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKGSRRAGALAPPG 297
ASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKGSRRAGALAPPG
Sbjct: 241 ASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKGSRRAGALAPPG 297
>gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isoform
a [Homo sapiens]
Length = 291
Score = 295 bits (754), Expect = 4e-80
Identities = 146/147 (99%), Positives = 146/147 (99%)
Query: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
Query: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
Query: 121 FKVQTLARSLGLQMPVVVQSMYIFKSP 147
FKVQTLARSLGLQMPVVVQSMYIFK P
Sbjct: 121 FKVQTLARSLGLQMPVVVQSMYIFKQP 147
>gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isoform
c [Homo sapiens]
Length = 270
Score = 253 bits (646), Expect = 1e-67
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1 MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
Query: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61 LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
Query: 121 FKVQ 124
FKVQ
Sbjct: 121 FKVQ 124
>gi|239753274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 36.2 bits (82), Expect = 0.036
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPW-----------------SSSMEKWY 238
S LA R PA+ PG+ AS CPP+ GP+ +
Sbjct: 94 SSAQLASRTAPAA-PPCAPGLLASRCPPEDSAGPFLFLGREHVRGGARGGHGHCGAQGRR 152
Query: 239 TRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNC 277
RA RTSL A L +W P PG R T +Q C
Sbjct: 153 RRACRTSLRLGASRRL--AWSPRTSPGLRGTSPAQAWPC 189
>gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo
sapiens]
Length = 263
Score = 36.2 bits (82), Expect = 0.036
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPW-----------------SSSMEKWY 238
S LA R PA+ PG+ AS CPP+ GP+ +
Sbjct: 94 SSAQLASRTAPAA-PPCAPGLLASRCPPEDSAGPFLFLSREHVRGGARGGHGHCGAQGRR 152
Query: 239 TRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNC 277
RA RTSL A L +W P PG R T +Q C
Sbjct: 153 RRACRTSLRLGASRRL--AWSPRTSPGLRGTSPAQAWPC 189
>gi|169217677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 0.047
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 176 RTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCRE---GPWSS 232
RT SG P P +C S P VP G S+P ++ + PP CR+ P +S
Sbjct: 72 RTCASG----PAPSICAHA-SAPTNCDTSVPPPSGASKPAVSCFIPPPTCRDKDPNPRAS 126
Query: 233 SMEKWYTRASRTSLT 247
+ +R SR SLT
Sbjct: 127 RTASYCSR-SRDSLT 140
>gi|113430753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 35.0 bits (79), Expect = 0.079
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 176 RTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCRE---GPWSS 232
RT SG P P +C S P VP G S+P ++ + PP CR+ P +S
Sbjct: 72 RTCASG----PAPSICAHA-SAPTNCGTSVPPPSGASKPAVSCFIPPPTCRDKDPNPRAS 126
Query: 233 SMEKWYTRASRTSLT 247
+ +R SR SLT
Sbjct: 127 RTASYCSR-SRDSLT 140
>gi|239747153 PREDICTED: hypothetical protein XP_002343929 [Homo
sapiens]
Length = 150
Score = 35.0 bits (79), Expect = 0.079
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 176 RTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCRE---GPWSS 232
RT SG P P +C S P VP G S+P ++ + PP CR+ P +S
Sbjct: 72 RTCASG----PAPSICAHA-SAPTNCGTSVPPPSGASKPAVSCFIPPPTCRDKDPNPRAS 126
Query: 233 SMEKWYTRASRTSLT 247
+ +R SR SLT
Sbjct: 127 RTASYCSR-SRDSLT 140
>gi|110735441 ADAM metallopeptidase with thrombospondin type 1 motif,
16 preproprotein [Homo sapiens]
Length = 1224
Score = 32.7 bits (73), Expect = 0.39
Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 165 ACGSQWRMPRW----RTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASL 220
AC W + W RT G+ P + + + L P S+ +
Sbjct: 926 ACPPSWSVGNWSACSRTCGGGAQSRPVQCTRRVHYDSEPVPASLCPQPAPSSRQACNSQS 985
Query: 221 CPPQCREGPWSSSM----EKWYTRA---SRTSLTARAR 251
CPP GPW+ + W RA T+ +ARA+
Sbjct: 986 CPPAWSAGPWAECSHTCGKGWRKRAVACKSTNPSARAQ 1023
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 32.3 bits (72), Expect = 0.52
Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ S P+L + P S+P +T S P + S
Sbjct: 185 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTL------TPSSRP 238
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
TR+S +LT + PTL+ S P P T + P+ TP
Sbjct: 239 ILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTP 286
Score = 32.0 bits (71), Expect = 0.67
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLS 255
S P+L + P S P +T S P + S T +SR LT + PTL+
Sbjct: 164 SRPILTRSSTPTLTPSSTPTLTPSSTPTL------TPSSTPTLTPSSRPILTRSSTPTLT 217
Query: 256 TSWRPLAPPGARRT 269
S RP+ P + T
Sbjct: 218 PSSRPILTPSSTPT 231
Score = 30.0 bits (66), Expect = 2.6
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ + P L P S P +T S P + S
Sbjct: 97 TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL------TPSSRP 150
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
TR+S +LT +RP L+ S P P + T + P+ TP
Sbjct: 151 ILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTP 198
Score = 29.3 bits (64), Expect = 4.4
Identities = 23/89 (25%), Positives = 34/89 (38%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLS 255
S P L P + P +T S P + + + TR+S +LT + PTL+
Sbjct: 46 SPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLT 105
Query: 256 TSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
S P P T + P+ TP
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTP 134
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 32.3 bits (72), Expect = 0.52
Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ S P+L + P S+P +T S P + S
Sbjct: 185 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTL------TPSSRP 238
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
TR+S +LT + PTL+ S P P T + P+ TP
Sbjct: 239 ILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTP 286
Score = 32.0 bits (71), Expect = 0.67
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLS 255
S P+L + P S P +T S P + S T +SR LT + PTL+
Sbjct: 164 SRPILTRSSTPTLTPSSTPTLTPSSTPTL------TPSSTPTLTPSSRPILTRSSTPTLT 217
Query: 256 TSWRPLAPPGARRT 269
S RP+ P + T
Sbjct: 218 PSSRPILTPSSTPT 231
Score = 30.0 bits (66), Expect = 2.6
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ + P L P S P +T S P + S
Sbjct: 97 TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL------TPSSRP 150
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
TR+S +LT +RP L+ S P P + T + P+ TP
Sbjct: 151 ILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTP 198
Score = 29.3 bits (64), Expect = 4.4
Identities = 23/89 (25%), Positives = 34/89 (38%)
Query: 196 SGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLS 255
S P L P + P +T S P + + + TR+S +LT + PTL+
Sbjct: 46 SPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLT 105
Query: 256 TSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
S P P T + P+ TP
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTP 134
>gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 3 preproprotein [Homo sapiens]
Length = 1340
Score = 32.0 bits (71), Expect = 0.67
Identities = 44/149 (29%), Positives = 50/149 (33%), Gaps = 18/149 (12%)
Query: 152 PPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASL-- 209
P +C P WA G +A G L PV C E G LL + L PA
Sbjct: 703 PEACVLEPCPPYWAVGDFGPC----SASCGGGLRERPVRCVEA-QGSLL-KTLPPARCRA 756
Query: 210 GQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRT 269
G QP + C PQ W S T A L A T L P
Sbjct: 757 GAQQPAVALETCNPQPCPARWEVSEPSSCTSAGGAGL-ALENETCVPGADGLEAPVTEGP 815
Query: 270 GS-SQQLNCPFPNCTPKGSRRAGALAPPG 297
GS ++L P P C G PPG
Sbjct: 816 GSVDEKLPAPEP-C-------VGMSCPPG 836
>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 2 preproprotein [Homo sapiens]
Length = 1371
Score = 32.0 bits (71), Expect = 0.67
Identities = 44/149 (29%), Positives = 50/149 (33%), Gaps = 18/149 (12%)
Query: 152 PPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASL-- 209
P +C P WA G +A G L PV C E G LL + L PA
Sbjct: 734 PEACVLEPCPPYWAVGDFGPC----SASCGGGLRERPVRCVEA-QGSLL-KTLPPARCRA 787
Query: 210 GQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRT 269
G QP + C PQ W S T A L A T L P
Sbjct: 788 GAQQPAVALETCNPQPCPARWEVSEPSSCTSAGGAGL-ALENETCVPGADGLEAPVTEGP 846
Query: 270 GS-SQQLNCPFPNCTPKGSRRAGALAPPG 297
GS ++L P P C G PPG
Sbjct: 847 GSVDEKLPAPEP-C-------VGMSCPPG 867
>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 1 preproprotein [Homo sapiens]
Length = 1427
Score = 32.0 bits (71), Expect = 0.67
Identities = 44/149 (29%), Positives = 50/149 (33%), Gaps = 18/149 (12%)
Query: 152 PPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASL-- 209
P +C P WA G +A G L PV C E G LL + L PA
Sbjct: 734 PEACVLEPCPPYWAVGDFGPC----SASCGGGLRERPVRCVEA-QGSLL-KTLPPARCRA 787
Query: 210 GQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRT 269
G QP + C PQ W S T A L A T L P
Sbjct: 788 GAQQPAVALETCNPQPCPARWEVSEPSSCTSAGGAGL-ALENETCVPGADGLEAPVTEGP 846
Query: 270 GS-SQQLNCPFPNCTPKGSRRAGALAPPG 297
GS ++L P P C G PPG
Sbjct: 847 GSVDEKLPAPEP-C-------VGMSCPPG 867
>gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens]
Length = 296
Score = 31.2 bits (69), Expect = 1.1
Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 25/120 (20%)
Query: 170 WRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGP 229
WR P A+ G + + C W G + + G++ +T + PP+ +E P
Sbjct: 97 WRRP----ALPGETALGRDLSC--AWEGCMKGGLCRAWNPGRTWSPVTIGIAPPERQESP 150
Query: 230 WSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKGSRR 289
W S + RARP + + L P R T C PKGS R
Sbjct: 151 WRSPGQ-------------RARPAGRPAAQELLDPCTRETLLGALSQC------PKGSAR 191
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 31.2 bits (69), Expect = 1.1
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ S P L P S P +T S P + S
Sbjct: 127 TPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL------TPSSTP 180
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
T +SR LT + PTL+ S P P + T + P+ TP
Sbjct: 181 TLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTP 228
Score = 30.0 bits (66), Expect = 2.6
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ S P L P + S P +T S P + S
Sbjct: 191 TRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTL------TPSSRP 244
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGA 266
TR+S +LT + PTL+ S P P +
Sbjct: 245 TLTRSSTPTLTPSSTPTLTPSSTPTLTPSS 274
Score = 28.9 bits (63), Expect = 5.7
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 10/102 (9%)
Query: 183 SLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRAS 242
S PT C P L P++ P T +L P S T +S
Sbjct: 65 SNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTP----------SSTPTLTPSS 114
Query: 243 RTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
+LT + PTL+ S P P + T + P+ TP
Sbjct: 115 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTP 156
Score = 28.1 bits (61), Expect = 9.7
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 204 LVPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAP 263
L P++ P T +L P C + S T +S +LT + PTL+ S P
Sbjct: 62 LTPSNTPTLTPCSTPTLTP--CSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLT 119
Query: 264 PGARRTGSSQQLNCPFPNCTPKGSRRAGALAPP 296
P + T + P+ TP +R + P
Sbjct: 120 PSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTP 152
Score = 28.1 bits (61), Expect = 9.7
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 14/108 (12%)
Query: 177 TAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSSMEK 236
T S +L P+ S P+L + P S P +T S P
Sbjct: 167 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPT------------- 213
Query: 237 WYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTP 284
T ++ +L + PTL+ S P P +R T + P+ TP
Sbjct: 214 -LTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSSTP 260
>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 150 RTPPSCTRSPWAGCWACGSQWRMPRWRTA 178
RT P+C+ +P C AC ++ R PR RT+
Sbjct: 59 RTAPTCSGAPRTRCTACTARSRSPRRRTS 87
>gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo
sapiens]
Length = 140
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 150 RTPPSCTRSPWAGCWACGSQWRMPRWRTA 178
RT P+C+ +P C AC ++ R PR RT+
Sbjct: 59 RTAPTCSGAPRTRCTACTARSRSPRRRTS 87
>gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
sapiens]
Length = 140
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 150 RTPPSCTRSPWAGCWACGSQWRMPRWRTA 178
RT P+C+ +P C AC ++ R PR RT+
Sbjct: 59 RTAPTCSGAPRTRCTACTARSRSPRRRTS 87
>gi|193211603 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 2 [Homo sapiens]
Length = 1110
Score = 31.2 bits (69), Expect = 1.1
Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 28/181 (15%)
Query: 115 KSITHSFKVQTLARSLGLQMP-VVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMP 173
+++T + + Q + L + P VV+Q + + + PP+ R WA GS+
Sbjct: 483 EALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQ 542
Query: 174 RWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSS 233
R A + CQ+ W L + + ASL G TASLC Q P
Sbjct: 543 ECRWAWAR---------CQDTW---LALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPP 590
Query: 234 MEKWYT-------RASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
+ K Y+ S + T++ RP A GA S P P G
Sbjct: 591 LRKAYSFDRNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQAS--------PTVPPPG 642
Query: 287 S 287
S
Sbjct: 643 S 643
>gi|193211598 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 31.2 bits (69), Expect = 1.1
Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 28/181 (15%)
Query: 115 KSITHSFKVQTLARSLGLQMP-VVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMP 173
+++T + + Q + L + P VV+Q + + + PP+ R WA GS+
Sbjct: 564 EALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQ 623
Query: 174 RWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSS 233
R A + CQ+ W L + + ASL G TASLC Q P
Sbjct: 624 ECRWAWAR---------CQDTW---LALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPP 671
Query: 234 MEKWYT-------RASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
+ K Y+ S + T++ RP A GA S P P G
Sbjct: 672 LRKAYSFDRNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQAS--------PTVPPPG 723
Query: 287 S 287
S
Sbjct: 724 S 724
>gi|193211596 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 31.2 bits (69), Expect = 1.1
Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 28/181 (15%)
Query: 115 KSITHSFKVQTLARSLGLQMP-VVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMP 173
+++T + + Q + L + P VV+Q + + + PP+ R WA GS+
Sbjct: 564 EALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQ 623
Query: 174 RWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSS 233
R A + CQ+ W L + + ASL G TASLC Q P
Sbjct: 624 ECRWAWAR---------CQDTW---LALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPP 671
Query: 234 MEKWYT-------RASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
+ K Y+ S + T++ RP A GA S P P G
Sbjct: 672 LRKAYSFDRNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQAS--------PTVPPPG 723
Query: 287 S 287
S
Sbjct: 724 S 724
>gi|193211594 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 31.2 bits (69), Expect = 1.1
Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 28/181 (15%)
Query: 115 KSITHSFKVQTLARSLGLQMP-VVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMP 173
+++T + + Q + L + P VV+Q + + + PP+ R WA GS+
Sbjct: 564 EALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQ 623
Query: 174 RWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSS 233
R A + CQ+ W L + + ASL G TASLC Q P
Sbjct: 624 ECRWAWAR---------CQDTW---LALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPP 671
Query: 234 MEKWYT-------RASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
+ K Y+ S + T++ RP A GA S P P G
Sbjct: 672 LRKAYSFDRNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQAS--------PTVPPPG 723
Query: 287 S 287
S
Sbjct: 724 S 724
>gi|55742734 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 31.2 bits (69), Expect = 1.1
Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 28/181 (15%)
Query: 115 KSITHSFKVQTLARSLGLQMP-VVVQSMYIFKSPLIRTPPSCTRSPWAGCWACGSQWRMP 173
+++T + + Q + L + P VV+Q + + + PP+ R WA GS+
Sbjct: 564 EALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQ 623
Query: 174 RWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGITASLCPPQCREGPWSSS 233
R A + CQ+ W L + + ASL G TASLC Q P
Sbjct: 624 ECRWAWAR---------CQDTW---LALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPP 671
Query: 234 MEKWYT-------RASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
+ K Y+ S + T++ RP A GA S P P G
Sbjct: 672 LRKAYSFDRNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQAS--------PTVPPPG 723
Query: 287 S 287
S
Sbjct: 724 S 724
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 213 QPGITASLCPP--QCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRTG 270
Q TA CPP C WS+ ++ R +R R + S SW P R
Sbjct: 4146 QLSCTAQPCPPPTHCAWSHWSAWSPCSHSCGPRGQ-QSRFRSSTSGSWAPEC-----REE 4199
Query: 271 SSQQLNCPFPNCTP 284
SQ CP P+C P
Sbjct: 4200 QSQSQPCPQPSCPP 4213
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 21/82 (25%)
Query: 158 SPWAGC-WACGSQWRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPASLGQSQPGI 216
S W+ C +CG + + R+R++ SG S AP C+E S QSQP
Sbjct: 4166 SAWSPCSHSCGPRGQQSRFRSSTSG-SWAPE---CREEQS--------------QSQPCP 4207
Query: 217 TASLCPPQCREGPWSSSM-EKW 237
S CPP C +G S ++ + W
Sbjct: 4208 QPS-CPPLCLQGTRSRTLGDSW 4228
>gi|31542760 hypothetical protein LOC220108 [Homo sapiens]
Length = 582
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 227 EGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGARRTGSSQQLNCPFPNCTPKG 286
E W+S + + R+S +S TARA P AP + T SS QL C TPK
Sbjct: 510 EASWAS-LPFFTKRSSSSSATARAAPP--------APSTSTLTDSSPQLPCD----TPKV 556
Query: 287 SRRAGALAPP 296
+ G + PP
Sbjct: 557 KQTDGDMPPP 566
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/119 (31%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 146 SPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAP-TPVVCQEGWSGPLLAQRL 204
SP IR PS + SP S R RW T S S P T V + P+
Sbjct: 131 SPGIRPSPSPSPSPSPS----PSPARGGRWTTCASSSPALPGTDGVLRR--MSPVCPPSP 184
Query: 205 VPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARAR---PTLSTSWRP 260
V + S P + ASL PP R P + K + S R R P+L S P
Sbjct: 185 VVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHP 243
>gi|169171483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 257 SWRPLAPPGARRTGSSQQLNCPFPNCTPKGSRRAGALAP 295
+W PG G +Q +CP P TP G A +AP
Sbjct: 113 AWSQCCQPGGSTGGDPEQPSCPVPLITPPGLLVAPMVAP 151
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/119 (31%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 146 SPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAP-TPVVCQEGWSGPLLAQRL 204
SP IR PS + SP S R RW T S S P T V + P+
Sbjct: 131 SPGIRPSPSPSPSPSPS----PSPARGGRWTTCASSSPALPGTDGVLRR--MSPVCPPSP 184
Query: 205 VPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARAR---PTLSTSWRP 260
V + S P + ASL PP R P + K + S R R P+L S P
Sbjct: 185 VVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHP 243
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/119 (31%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 146 SPLIRTPPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAP-TPVVCQEGWSGPLLAQRL 204
SP IR PS + SP S R RW T S S P T V + P+
Sbjct: 131 SPGIRPSPSPSPSPSPS----PSPARGGRWTTCASSSPALPGTDGVLRR--MSPVCPPSP 184
Query: 205 VPASLGQSQPGITASLCPPQCREGPWSSSMEKWYTRASRTSLTARAR---PTLSTSWRP 260
V + S P + ASL PP R P + K + S R R P+L S P
Sbjct: 185 VVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHP 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,364,479
Number of Sequences: 37866
Number of extensions: 653327
Number of successful extensions: 2239
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 2152
Number of HSP's gapped (non-prelim): 140
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.