Guide to the Human Genome
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Name: BAIAP3 Sequence: fasta or formatted (1187aa) NCBI GI: 15451914
Description:

BAI1-associated protein 3

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6        114           3
 C cysteine            1.9         23           1
 D aspartate           5.4         64           3
 E glutamate           7.3         87           2
 F phenylalanine       3.7         44           2
 G glycine             6.4         76           3
 H histidine           2.9         34           2
 I isoleucine          2.2         26           1
 K lysine              4.0         48           2
 L leucine            14.2        168           4
 M methionine          1.5         18           1
 N asparagine          1.9         22           2
 P proline             5.7         68           2
 Q glutamine           5.0         59           2
 R arginine            6.9         82           3
 S serine              7.0         83           3
 T threonine           4.4         52           2
 V valine              6.5         77           2
 W tryptophan          1.5         18           1
 Y tyrosine            2.0         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BAI1-associated protein 3 
UNC13D                0.232   unc-13 homolog D 
UNC13B                0.036   UNC13 (C. elegans)-like 
UNC13C                0.036   unc-13 homolog C 
UNC13A                0.029   unc-13 homolog A 
SYT5                  0.019   synaptotagmin V 
SYT17                 0.018   B/K protein 
DOC2B                 0.018   double C2-like domains, beta 
SYT3                  0.018   synaptotagmin III 
SYT3                  0.018   synaptotagmin III 
SYT3                  0.018   synaptotagmin III 
SYT1                  0.017   synaptotagmin I 
SYT1                  0.017   synaptotagmin I 
SYT1                  0.017   synaptotagmin I 
PRKCA                 0.016   protein kinase C, alpha 
LOC390213             0.016   PREDICTED: hypothetical protein LOC390213 
SYT7                  0.016   synaptotagmin VII 
SYT2                  0.015   synaptotagmin II 
SYT2                  0.015   synaptotagmin II 
DOC2A                 0.015   double C2-like domains, alpha 
PRKCG                 0.015   protein kinase C, gamma 
LOC390213             0.015   PREDICTED: similar to hCG21066 
LOC390213             0.015   PREDICTED: similar to hCG21066 
PRKCB                 0.014   protein kinase C, beta isoform 1 
PRKCB                 0.014   protein kinase C, beta isoform 2 
SYT4                  0.014   synaptotagmin IV 
RPH3A                 0.014   rabphilin 3A homolog isoform 1 
RPH3A                 0.014   rabphilin 3A homolog isoform 2 
SYT6                  0.014   synaptotagmin VI 
SYT9                  0.014   synaptotagmin IX 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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