LOC390213 8350

Name: LOC390213	Sequence: fasta or formatted (451aa)		NCBI GI: 169203543
Description: PREDICTED: similar to hCG21066		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt mRNA [451aa] PREDICTED: similar to hCG21066 alt prot [431aa] PREDICTED: hypothetical protein LOC390213
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 43 3 C cysteine 2.7 12 2 D aspartate 4.7 21 2 E glutamate 5.8 26 2 F phenylalanine 3.3 15 2 G glycine 7.3 33 2 H histidine 4.4 20 1 I isoleucine 1.3 6 1 K lysine 4.7 21 2 L leucine 10.9 49 2 M methionine 1.6 7 1 N asparagine 2.0 9 1 P proline 8.9 40 3 Q glutamine 3.8 17 2 R arginine 6.9 31 2 S serine 7.8 35 2 T threonine 4.9 22 1 V valine 6.0 27 2 W tryptophan 1.8 8 1 Y tyrosine 2.0 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG21066 LOC390213 1.000 PREDICTED: similar to hCG21066 LOC390213 0.470 PREDICTED: hypothetical protein LOC390213 DOC2A 0.319 double C2-like domains, alpha RPH3A 0.188 rabphilin 3A homolog isoform 1 RPH3A 0.188 rabphilin 3A homolog isoform 2 DOC2B 0.182 double C2-like domains, beta SYT2 0.084 synaptotagmin II SYT2 0.084 synaptotagmin II SYT1 0.082 synaptotagmin I SYT1 0.082 synaptotagmin I SYT1 0.082 synaptotagmin I SYT6 0.081 synaptotagmin VI SYT3 0.074 synaptotagmin III SYT3 0.074 synaptotagmin III SYT3 0.074 synaptotagmin III SYT10 0.074 synaptotagmin X SYT5 0.072 synaptotagmin V PCLO 0.072 piccolo isoform 2 PCLO 0.072 piccolo isoform 1 SYT7 0.072 synaptotagmin VII SYT9 0.071 synaptotagmin IX SYT17 0.068 B/K protein SYT4 0.066 synaptotagmin IV SYT8 0.062 synaptotagmin VIII ESYT2 0.058 family with sequence similarity 62 (C2 domain contai... SYTL4 0.057 synaptotagmin-like 4 SYTL4 0.057 synaptotagmin-like 4 PRKCA 0.053 protein kinase C, alpha PRKCB 0.051 protein kinase C, beta isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.