Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KCNE4 Sequence: fasta or formatted (170aa) NCBI GI: 154448884
Description:

potassium voltage-gated channel, Isk-related family, member 4

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          8           2
 C cysteine            1.2          2           1
 D aspartate           2.9          5           2
 E glutamate          11.2         19           2
 F phenylalanine       1.8          3           1
 G glycine             8.2         14           3
 H histidine           1.8          3           1
 I isoleucine          3.5          6           1
 K lysine              4.1          7           2
 L leucine            12.4         21           4
 M methionine          5.3          9           1
 N asparagine          4.1          7           1
 P proline             5.3          9           1
 Q glutamine           2.4          4           1
 R arginine            2.9          5           2
 S serine             15.9         27           3
 T threonine           3.5          6           1
 V valine              5.3          9           2
 W tryptophan          0.6          1           1
 Y tyrosine            2.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, Isk-related family... 
KCNE1                 0.052   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.052   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.052   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.052   potassium voltage-gated channel, Isk-related family,...
KCNE3                 0.039   potassium voltage-gated channel, Isk-related family, ...
MAGEA8                0.029   melanoma antigen family A, 8 
EPN2                  0.029   epsin 2 isoform b 
PJA2                  0.023   praja 2, RING-H2 motif containing 
KCNE1L                0.019   potassium voltage-gated channel, Isk-related family, ...
MUC16                 0.019   mucin 16 
POU4F2                0.019   Brn3b POU domain transcription factor 
BRD2                  0.016   bromodomain containing 2 
BRD2                  0.016   bromodomain containing 2 
FGD5                  0.016   FYVE, RhoGEF and PH domain containing 5 
ZNF711                0.016   zinc finger protein 711 
KCNE2                 0.013   potassium voltage-gated channel, Isk-related family,...
L3MBTL                0.013   l(3)mbt-like isoform I 
L3MBTL                0.013   l(3)mbt-like isoform II 
VWA3A                 0.013   von Willebrand factor A domain containing 3A 
EPN2                  0.013   epsin 2 isoform a 
MTERFD2               0.010   MTERF domain containing 2 
CLIP1                 0.010   restin isoform b 
CLIP1                 0.010   restin isoform a 
NOP14                 0.010   probable nucleolar complex protein 14 
MYCBP2                0.010   MYC binding protein 2 
GOLGB1                0.010   golgi autoantigen, golgin subfamily b, macrogolgin ...
SETD1A                0.010   SET domain containing 1A 
FOXC1                 0.010   forkhead box C1 
PCDHA9                0.010   protocadherin alpha 9 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press