Guide to the Human Genome
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Name: KCNE2 Sequence: fasta or formatted (123aa) NCBI GI: 27436978
Description:

potassium voltage-gated channel, Isk-related family, member 2

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5          8           2
 C cysteine            0.0          0           0
 D aspartate           4.1          5           1
 E glutamate           8.1         10           2
 F phenylalanine       5.7          7           1
 G glycine             2.4          3           1
 H histidine           2.4          3           1
 I isoleucine          8.9         11           2
 K lysine              5.7          7           1
 L leucine             6.5          8           1
 M methionine          4.9          6           1
 N asparagine          5.7          7           1
 P proline             1.6          2           1
 Q glutamine           5.7          7           1
 R arginine            4.1          5           2
 S serine              7.3          9           1
 T threonine           6.5          8           2
 V valine              6.5          8           1
 W tryptophan          1.6          2           1
 Y tyrosine            5.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, Isk-related family,... 
KCNE1                 0.135   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.135   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.135   potassium voltage-gated channel, Isk-related family...
KCNE1                 0.135   potassium voltage-gated channel, Isk-related family,...
KCNE3                 0.031   potassium voltage-gated channel, Isk-related family, ...
KCNE4                 0.018   potassium voltage-gated channel, Isk-related family...
COMMD9                0.018   COMM domain containing 9 isoform 2 
COMMD9                0.018   COMM domain containing 9 isoform 1 
CACNA1I               0.013   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.013   calcium channel, voltage-dependent, T type, alpha 1I...
CEP350                0.013   centrosome-associated protein 350 
C14orf28              0.009   hypothetical protein LOC122525 
RPL3                  0.009   ribosomal protein L3 isoform b 
ATG2A                 0.009   autophagy related 2A 
ANO6                  0.009   anoctamin 6 isoform c 
ANO6                  0.009   anoctamin 6 isoform c 
ANO6                  0.009   anoctamin 6 isoform b 
ANO6                  0.009   anoctamin 6 isoform a 
CATSPER2              0.009   sperm-associated cation channel 2 isoform 2 
CATSPER2              0.009   sperm-associated cation channel 2 isoform 1 
ZNF283                0.009   zinc finger protein 283 
PLA2G6                0.009   phospholipase A2, group VI isoform b 
PLA2G6                0.009   phospholipase A2, group VI isoform a 
KRT2                  0.009   keratin 2 
DNAH17                0.004   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.004   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.004   PREDICTED: dynein, axonemal, heavy chain 17 
CCDC41                0.004   NY-REN-58 antigen 
CCDC41                0.004   NY-REN-58 antigen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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