Search of human proteins with 154426294

Search of human proteins with 154426294

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154426294 hypothetical protein LOC23366 isoform 2 [Homo
sapiens]
         (469 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154426294 hypothetical protein LOC23366 isoform 2 [Homo sapiens]   962   0.0  
gi|154426320 hypothetical protein LOC23366 isoform 1 [Homo sapiens]   948   0.0  
gi|106507204 hypothetical protein LOC653319 [Homo sapiens]            362   e-100
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         32   0.95 
gi|193804862 synaptotagmin-like 4 [Homo sapiens]                       32   1.2  
gi|193804860 synaptotagmin-like 4 [Homo sapiens]                       32   1.2  
gi|52485606 formin-like 2 [Homo sapiens]                               31   2.8  
gi|52856434 POTE ankyrin domain family, member G [Homo sapiens]        30   4.7  
gi|224282147 prostate-specific P704P [Homo sapiens]                    30   4.7  
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ...    30   4.7  
gi|134133226 protein expressed in prostate, ovary, testis, and p...    30   4.7  
gi|209977003 ANKRD26-like family C, member 3 [Homo sapiens]            30   4.7  
gi|113413200 PREDICTED: similar to protein expressed in prostate...    30   4.7  
gi|239741769 PREDICTED: similar to protein expressed in prostate...    30   4.7  
gi|88953571 PREDICTED: similar to protein expressed in prostate,...    30   4.7  
gi|153791352 prostate, ovary, testis expressed protein on chromo...    30   4.7  
gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho...    30   4.7  
gi|27436893 tapasin isoform 1 precursor [Homo sapiens]                 30   6.1  
gi|27436897 tapasin isoform 3 precursor [Homo sapiens]                 30   6.1  
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]              30   6.1  
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]              30   6.1  
gi|239741786 PREDICTED: kappa-actin [Homo sapiens]                     30   6.1  
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               30   6.1  
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ...    30   6.1  
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [...    30   6.1  
gi|239757060 PREDICTED: hypothetical protein [Homo sapiens]            29   8.0  
gi|239751570 PREDICTED: hypothetical protein XP_002347902 [Homo ...    29   8.0  
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ...    29   8.0  
gi|239746082 PREDICTED: hypothetical protein XP_002343651 [Homo ...    29   8.0  
gi|63055059 SH3 and PX domains 2B [Homo sapiens]                       29   8.0  

>gi|154426294 hypothetical protein LOC23366 isoform 2 [Homo sapiens]
          Length = 469

 Score =  962 bits (2486), Expect = 0.0
 Identities = 469/469 (100%), Positives = 469/469 (100%)

Query: 1   MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL 60
           MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL
Sbjct: 1   MLESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVL 60

Query: 61  LQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP 120
           LQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP
Sbjct: 61  LQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRP 120

Query: 121 AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF 180
           AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF
Sbjct: 121 AVFVTSSVSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDF 180

Query: 181 SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIV 240
           SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIV
Sbjct: 181 SGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIV 240

Query: 241 VHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSW 300
           VHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSW
Sbjct: 241 VHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSW 300

Query: 301 TGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRF 360
           TGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRF
Sbjct: 301 TGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRF 360

Query: 361 VKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSY 420
           VKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSY
Sbjct: 361 VKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSY 420

Query: 421 EDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI 469
           EDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
Sbjct: 421 EDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI 469


>gi|154426320 hypothetical protein LOC23366 isoform 1 [Homo sapiens]
          Length = 520

 Score =  948 bits (2451), Expect = 0.0
 Identities = 461/462 (99%), Positives = 462/462 (100%)

Query: 8   TEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEEK 67
           +EKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEEK
Sbjct: 59  SEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEEK 118

Query: 68  KYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSS 127
           KYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSS
Sbjct: 119 KYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSS 178

Query: 128 VSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCI 187
           VSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCI
Sbjct: 179 VSSPVKFTHDISVTGNGIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDDFSGKKFCI 238

Query: 188 LTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIVVHLTEDL 247
           LTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIVVHLTEDL
Sbjct: 239 LTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAKHSHASDRFLKQIVVHLTEDL 298

Query: 248 LSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHE 307
           LSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHE
Sbjct: 299 LSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNSWTGRKKHE 358

Query: 308 LKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTR 367
           LKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTR
Sbjct: 359 LKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGRFVKDPNTR 418

Query: 368 WDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLK 427
           WDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLK
Sbjct: 419 WDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVSYEDVDRLK 478

Query: 428 GLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI 469
           GLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI
Sbjct: 479 GLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI 520


>gi|106507204 hypothetical protein LOC653319 [Homo sapiens]
          Length = 471

 Score =  362 bits (928), Expect = e-100
 Identities = 181/350 (51%), Positives = 236/350 (67%), Gaps = 48/350 (13%)

Query: 168 PQLSRSFEKGDDFSGKKFCILTAIKPTNLEKEKLRFFKSDYTYNPQFEYANPALPSVLAK 227
           P ++++       + K  C+L A++PTN+++E+ +FF+S YTYNPQFEY  P   +VL K
Sbjct: 120 PHIAKTQRDAGHIASKSPCMLVALRPTNMDRERDKFFQSHYTYNPQFEYQEPMPTAVLEK 179

Query: 228 HSHASDRFLKQ------------------------------------------------I 239
           +  AS +F+ Q                                                +
Sbjct: 180 YCEASGQFIHQAVGIIEAVLEKFGTYEHFEAATGGQLLTKCQIWSIVRKYMQKEGCAGEV 239

Query: 240 VVHLTEDLLSRASMTVVNGCPTLTINVSTAREHWLEGMLRHEIGTHYFRGINNLQQPWNS 299
           VV L+EDLLS+A M V N  PTL IN++ AR++WLEGMLRHEIGTHY RG+NN +QPW++
Sbjct: 240 VVQLSEDLLSQAVMMVENSRPTLAINLTGARQYWLEGMLRHEIGTHYLRGVNNARQPWHN 299

Query: 300 WTGRKKHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLYYTVYQASQMSFCELFKDIGR 359
             GR ++ L+P NPTEEGLAS+HSVLFRK PFLWRAALLYYT+++A++MSF +LF+D+ R
Sbjct: 300 AEGRLRYGLRPANPTEEGLASLHSVLFRKQPFLWRAALLYYTIHRAARMSFRQLFQDLER 359

Query: 360 FVKDPNTRWDYCVRAKRGWTDTSQPGCFSKDQVYLDGILQILRYRDTIDFHLLTALGKVS 419
           +V+D + RW+YCVRAKRG TDTS PGCFSKDQVYLDGI++ILR+R TIDF LLT+LGKVS
Sbjct: 360 YVQDADVRWEYCVRAKRGQTDTSLPGCFSKDQVYLDGIVRILRHRQTIDFPLLTSLGKVS 419

Query: 420 YEDVDRLKGLAVTENMRVPHFLQDHGRYMEHLEKIMEVNELTDRELKDLI 469
           YEDVD L+   V +N RVPHF+QD  RY + LE IM  N L + EL  L+
Sbjct: 420 YEDVDHLRPHGVLDNTRVPHFMQDLARYRQQLEHIMATNRLDEAELGRLL 469


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 5/114 (4%)

Query: 75  SSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKF 134
           SSS+ S R R P K P    S  PR+ + L P  S          PA     +  SP   
Sbjct: 359 SSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQ 418

Query: 135 THDISVTGNGIVLPPKPKSKV-----KWCHFSTLPKPKPQLSRSFEKGDDFSGK 183
             + +      V P +   KV          S  P PKP+     E  +D  GK
Sbjct: 419 QSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGK 472


>gi|193804862 synaptotagmin-like 4 [Homo sapiens]
          Length = 671

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 11/104 (10%)

Query: 3   ESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQ 62
           E I    KLH   Q+LA+ S+ +      I +  SI +  +G   +IF TG  ++++   
Sbjct: 311 EDIDHLVKLH--RQKLARSSMQSGSSMSTIGSMMSI-YSEAGDFGNIFVTGRIAFSL--- 364

Query: 63  SKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVP 106
                KY  Q QS   + K C + + +    +  +P     L+P
Sbjct: 365 -----KYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP 403


>gi|193804860 synaptotagmin-like 4 [Homo sapiens]
          Length = 671

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 11/104 (10%)

Query: 3   ESIRVTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQ 62
           E I    KLH   Q+LA+ S+ +      I +  SI +  +G   +IF TG  ++++   
Sbjct: 311 EDIDHLVKLH--RQKLARSSMQSGSSMSTIGSMMSI-YSEAGDFGNIFVTGRIAFSL--- 364

Query: 63  SKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVP 106
                KY  Q QS   + K C + + +    +  +P     L+P
Sbjct: 365 -----KYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP 403


>gi|52485606 formin-like 2 [Homo sapiens]
          Length = 1092

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 7   VTEKLHWPEQELAKKSILNAEDSLIIDNKRSISHLSSGVLKDIFTTGTSSYNVLLQSKEE 66
           ++EKL   E E   K I+  E  L+  NK         V+++I+    +  + L +  +E
Sbjct: 405 LSEKLQDTENEAMSK-IVELEKQLMQRNKEL------DVVREIYKDANTQVHTLRKMVKE 457

Query: 67  KKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGT 112
           K+   Q+QS  T  K+  +  K       K      A++PV +SGT
Sbjct: 458 KEEAIQRQS--TLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGT 501


>gi|52856434 POTE ankyrin domain family, member G [Homo sapiens]
          Length = 508

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTALHYAIYNEDKLMAKALLLY 261


>gi|224282147 prostate-specific P704P [Homo sapiens]
          Length = 508

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTALHYAIYNEDKLMAKALLLY 261


>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
           sapiens]
          Length = 1150

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 62  QSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVP 106
           +S+E ++   + +  S   KR R+  +SP   R + PRR++ +VP
Sbjct: 318 RSRERERERRRSRERSPQRKRSRE--RSPRRERERSPRRVRRVVP 360


>gi|134133226 protein expressed in prostate, ovary, testis, and
           placenta 2 [Homo sapiens]
          Length = 1075

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLY 261


>gi|209977003 ANKRD26-like family C, member 3 [Homo sapiens]
          Length = 545

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 264 EHGTDPNIPDEYGNTALHYAIYNEDKLMAKALLLY 298


>gi|113413200 PREDICTED: similar to protein expressed in prostate,
           ovary, testis, and placenta 2 [Homo sapiens]
          Length = 1038

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 190 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLY 224


>gi|239741769 PREDICTED: similar to protein expressed in prostate,
           ovary, testis, and placenta 2 [Homo sapiens]
          Length = 952

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLY 261


>gi|88953571 PREDICTED: similar to protein expressed in prostate,
           ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
          Length = 1075

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLY 261


>gi|153791352 prostate, ovary, testis expressed protein on
           chromosome 2 [Homo sapiens]
          Length = 1075

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLY 261


>gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Homo
           sapiens]
          Length = 155

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 63  SKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTS 109
           +  E++   +++S S    R R  S+SP+  RS+ PRR ++  P  S
Sbjct: 19  TSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPS 65


>gi|27436893 tapasin isoform 1 precursor [Homo sapiens]
          Length = 448

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 295 QPWNSWTGRKKHELKPNNPTEEG--LASIHSVLFRKDPFLWRAALLYYTVYQASQMS 349
           +PW  WTG     L    P +EG  LA+IH       P+L     L   VY+  ++S
Sbjct: 245 EPWGPWTGNGTFWLPTVQPFQEGTYLATIHL------PYLQGQVTLELAVYKPPKVS 295


>gi|27436897 tapasin isoform 3 precursor [Homo sapiens]
          Length = 412

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 295 QPWNSWTGRKKHELKPNNPTEEG--LASIHSVLFRKDPFLWRAALLYYTVYQASQMS 349
           +PW  WTG     L    P +EG  LA+IH       P+L     L   VY+  ++S
Sbjct: 245 EPWGPWTGNGTFWLPTVQPFQEGTYLATIHL------PYLQGQVTLELAVYKPPKVS 295


>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
          Length = 924

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 190 EHGTDPNIPDEYGNTTLHYAVYNEDKLMAKALLLY 224


>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
          Length = 924

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 190 EHGTDPNIPDEYGNTTLHYAVYNEDKLMAKALLLY 224


>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
          Length = 924

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 305 KHELKPNNPTEEGLASIHSVLFRKDPFLWRAALLY 339
           +H   PN P E G  ++H  ++ +D  + +A LLY
Sbjct: 190 EHGTDPNIPDEYGNTTLHYAVYNEDKLMAKALLLY 224


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 14/149 (9%)

Query: 15   EQELAKKSILNAEDSLIIDNKRSISHLSSGVL---KDIFTTGTSSYNVLLQSKEEKKYHS 71
            +Q L K   +   D+L +++K S   +    L   K         + V  +S E  K   
Sbjct: 1013 QQRLIKNEKMECPDALAVESKPSRKSVCINPLMSPKLALQVDADGFPVKPKSTEGMKGRK 1072

Query: 72   QKQSSS------TYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVT 125
             KQ S         SKR R    SP  S++K P    +        T     +RPA    
Sbjct: 1073 GKQVSEILPKAEVQSKRKRTEGSSPPDSKNKGPTVKASKEKHADGATKTPAAKRPAARDR 1132

Query: 126  SSVSSPVKFTHDISVTGNGIVLPPKPKSK 154
            S  S P K T   S+  N + +P K   K
Sbjct: 1133 S--SQPPKKT---SLKENKVKIPKKSAGK 1156


>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
           [Homo sapiens]
          Length = 624

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 54  TSSYNVLLQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKA 103
           +SS +   + + + K+ S+  + S   ++ R+ SKSP+  RSK   R K+
Sbjct: 318 SSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKS 367


>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
           [Homo sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 54  TSSYNVLLQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRMKA 103
           +SS +   + + + K+ S+  + S   ++ R+ SKSP+  RSK   R K+
Sbjct: 202 SSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKS 251


>gi|239757060 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/14 (78%), Positives = 11/14 (78%)

Query: 158 CHFSTLPKPKPQLS 171
           CHF TLP P PQLS
Sbjct: 122 CHFCTLPSPPPQLS 135


>gi|239751570 PREDICTED: hypothetical protein XP_002347902 [Homo
           sapiens]
          Length = 168

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/14 (78%), Positives = 11/14 (78%)

Query: 158 CHFSTLPKPKPQLS 171
           CHF TLP P PQLS
Sbjct: 122 CHFCTLPSPPPQLS 135


>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
           sapiens]
          Length = 1674

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 42  SSGVLKDIFTTGTSSYNVLLQSKEEKKYHSQKQSSSTYSKRCRKPSKSPNTSRSKDPRRM 101
           S G+     T   S+Y    + KE  +   + Q+S T  +    PS+SP   R K   + 
Sbjct: 393 SLGLAIKALTRSRSTY----REKESVEESPEGQNSGTAGESMGAPSRSPRLGRPKAVSKQ 448

Query: 102 KALVP 106
            AL+P
Sbjct: 449 AALIP 453


>gi|239746082 PREDICTED: hypothetical protein XP_002343651 [Homo
           sapiens]
          Length = 168

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/14 (78%), Positives = 11/14 (78%)

Query: 158 CHFSTLPKPKPQLS 171
           CHF TLP P PQLS
Sbjct: 122 CHFCTLPSPPPQLS 135


>gi|63055059 SH3 and PX domains 2B [Homo sapiens]
          Length = 911

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 144 GIVLPPKPKSKVKWCHFSTLPKPKPQLSRSFEKGDD 179
           G++LP  P   +     S  P+PKP  SR F+  +D
Sbjct: 558 GVILPMMPAKHIPPARDSRRPEPKPDKSRLFQLKND 593


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,317,985
Number of Sequences: 37866
Number of extensions: 851180
Number of successful extensions: 2696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2642
Number of HSP's gapped (non-prelim): 73
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.