Guide to the Human Genome
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Name: KIAA0895 Sequence: fasta or formatted (469aa) NCBI GI: 154426294
Description:

hypothetical protein LOC23366 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {520aa} hypothetical protein LOC23366 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         18           2
 C cysteine            1.7          8           1
 D aspartate           5.1         24           2
 E glutamate           5.8         27           2
 F phenylalanine       4.3         20           2
 G glycine             4.3         20           1
 H histidine           3.6         17           1
 I isoleucine          4.5         21           2
 K lysine              9.0         42           2
 L leucine            10.0         47           2
 M methionine          1.7          8           1
 N asparagine          3.8         18           2
 P proline             5.3         25           2
 Q glutamine           3.2         15           2
 R arginine            6.2         29           2
 S serine              9.8         46           3
 T threonine           6.6         31           2
 V valine              6.0         28           2
 W tryptophan          1.9          9           1
 Y tyrosine            3.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23366 isoform 2 
KIAA0895              0.985   hypothetical protein LOC23366 isoform 1 
KIAA0895L             0.360   hypothetical protein LOC653319 
SRRM1                 0.007   serine/arginine repetitive matrix 1 
SYTL4                 0.007   synaptotagmin-like 4 
SYTL4                 0.007   synaptotagmin-like 4 
FMNL2                 0.006   formin-like 2 
POTEG                 0.005   POTE ankyrin domain family, member G 
P704P                 0.005   prostate-specific P704P 
CCAR1                 0.005   cell-cycle and apoptosis regulatory protein 1 
POTEE                 0.005   protein expressed in prostate, ovary, testis, and p...
POTEH                 0.005   ANKRD26-like family C, member 3 
LOC653781             0.005   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.005   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.005   PREDICTED: similar to protein expressed in prostate,...
POTEF                 0.005   prostate, ovary, testis expressed protein on chromo...
SNRNP27               0.005   small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho...
TAPBP                 0.005   tapasin isoform 1 precursor 
TAPBP                 0.005   tapasin isoform 3 precursor 
ACTBL3                0.005   PREDICTED: actin, beta-like 3 
ACTBL3                0.005   PREDICTED: actin, beta-like 3 
ACTBL3                0.005   PREDICTED: kappa-actin 
C10orf12              0.005   hypothetical protein LOC26148 
SFRS12                0.005   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.005   splicing factor, arginine/serine-rich 12 isoform b [...
LOC100293286          0.004   PREDICTED: hypothetical protein 
LOC100290832          0.004   PREDICTED: hypothetical protein XP_002347902 
LOC100290717          0.004   PREDICTED: hypothetical protein XP_002347797 
LOC100289128          0.004   PREDICTED: hypothetical protein XP_002343651 
SH3PXD2B              0.004   SH3 and PX domains 2B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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