Guide to the Human Genome
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Name: KIAA0895 Sequence: fasta or formatted (520aa) NCBI GI: 154426320
Description:

hypothetical protein LOC23366 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {469aa} hypothetical protein LOC23366 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         22           2
 C cysteine            1.7          9           1
 D aspartate           4.6         24           2
 E glutamate           5.2         27           2
 F phenylalanine       4.4         23           2
 G glycine             4.2         22           1
 H histidine           3.8         20           1
 I isoleucine          4.0         21           2
 K lysine             10.0         52           2
 L leucine             9.4         49           2
 M methionine          1.5          8           1
 N asparagine          3.7         19           2
 P proline             5.4         28           2
 Q glutamine           2.9         15           2
 R arginine            8.5         44           3
 S serine              9.0         47           3
 T threonine           6.7         35           2
 V valine              5.4         28           2
 W tryptophan          2.1         11           1
 Y tyrosine            3.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23366 isoform 1 
KIAA0895              0.882   hypothetical protein LOC23366 isoform 2 
KIAA0895L             0.322   hypothetical protein LOC653319 
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 1...
RBM16                 0.011   RNA-binding motif protein 16 
SFRS4                 0.008   splicing factor, arginine/serine-rich 4 
LOC100133599          0.008   PREDICTED: hypothetical protein 
TNIK                  0.008   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.008   TRAF2 and NCK interacting kinase isoform 5 
SON                   0.008   SON DNA-binding protein isoform F 
SON                   0.008   SON DNA-binding protein isoform B 
SFRS11                0.007   splicing factor, arginine/serine-rich 11 
SRRM1                 0.007   serine/arginine repetitive matrix 1 
FMNL2                 0.007   formin-like 2 
SYTL4                 0.007   synaptotagmin-like 4 
SYTL4                 0.007   synaptotagmin-like 4 
NKTR                  0.006   natural killer-tumor recognition sequence 
SRRM2                 0.006   splicing coactivator subunit SRm300 
SFRS12                0.006   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.006   splicing factor, arginine/serine-rich 12 isoform b [...
LOC100170229          0.005   hypothetical protein LOC100170229 
TNIK                  0.005   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.005   TRAF2 and NCK interacting kinase isoform 1 
KIAA1853              0.005   KIAA1853 protein 
TRIM40                0.005   tripartite motif-containing 40 
ZC3H18                0.005   zinc finger CCCH-type containing 18 
POTEG                 0.005   POTE ankyrin domain family, member G 
P704P                 0.005   prostate-specific P704P 
CCAR1                 0.005   cell-cycle and apoptosis regulatory protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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